Carassius auratus (goldfish): 113076577
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Entry
113076577 CDS
T07313
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caua03016
]
113076577 (cdkal1)
Enzymes [BR:
caua01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
113076577 (cdkal1)
Transfer RNA biogenesis [BR:
caua03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
113076577 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
113076577
NCBI-ProteinID:
XP_026105056
Ensembl:
ENSCARG00000026053
UniProt:
A0A6P6N7M8
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MASMCDSPVDDIEDMVTSHDPTPHERQSARSNIVPRPRKHKLQPGAEELQTDSVIPGTQK
IWVRTWGCSHNSSDGEYMAGQLAASGYKITENPSDADLWLLNSCTVKNPAEDHFRNSIKK
AQEQNKKVVLAGCVPQAQPRSDYLKELSIIGVQQIDRVVEVVDEAIKGHSVRLLGQKKEK
GKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPSLLWELVKEIPEGAMLRLGMTNPPYILEHLEEM
GRVLQHPRVYSFLHVPVQSASDSVLMDMKREYCVADFTRVVDFLKDRVPGITIATDIICG
FPGETDEDFEQTMELVRQYRFPSLFINQFYPRPGTPAAKMEQVPAHVKKHRTKALSALFH
SYNPYDHKIGERQHVLVTEESFDSQHYVAHNKFYEQVLVPKKPEFKGKMIEVDIYEAGKH
YMKGRPVEDAQVFTPSIAQPLQKGQVSGLPQELKVTHQNGACASVASSALVGRSWRFDAD
GLKLLSLGLALAAVIVALVIEKLH
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctatgtgtgactctcctgttgatgatattgaggacatggtgacctctcatgac
cccactcctcacgagcgtcagtctgcccggagcaacatcgtgcctcgtccacgcaaacac
aagctccagcccggagcagaagagcttcagaccgacagtgtgattcctggcacacagaag
atctgggtgaggacctggggctgctctcacaacagctctgatggagaatacatggccgga
cagctggcagccagcggatataagatcacagagaacccgtctgatgctgatctgtggctg
ctgaacagctgcacagtcaagaaccctgcagaagatcacttcaggaactccatcaagaaa
gcgcaggagcagaataagaaggtggttctggctggatgtgtgccacaggctcagcccagg
tcagactacctgaaagagctgagcatcatcggggtccagcagatcgatcgagttgtggag
gtcgtggacgaggcaatcaaaggtcactccgtgcgtctgctgggtcagaagaaggagaaa
ggcaagcgtctgggaggagcgcggctggatctgcccaagatcaggaagaacccgctgatt
gaaataatttccatcaacacaggctgtctgaacgcttgcacgtactgcaaaaccaaacac
gcccgaggagacctggccagttaccccatcgaggagctggtggagagagcccgacagtcc
ttccaggagggcgtctgtgagatctggctgaccagcgaggacacgggtgcgtacggcagg
gacatcggcacagacctgccctctctgctctgggagctggtgaaggagatccccgaggga
gcgatgctgcgtttgggcatgaccaaccctccctacatcctggaacatctggaggagatg
ggtcgagtcctgcagcacccgagggtctacagcttcctccatgtgccggtgcagtctgcg
tctgacagtgtgctgatggacatgaagagagagtactgcgtcgctgacttcacacgcgtg
gtggacttcctgaaggacagggttcctggcatcactatcgccacagacatcatctgtggt
ttcccaggagagacggacgaggactttgagcagacgatggagctggtgagacagtaccgc
ttccccagcctcttcatcaaccagttctaccctcggcctgggactccagcggccaagatg
gagcaggttccagcgcacgtgaagaaacacagaaccaaagcgctctctgccctcttccac
tcctacaacccttacgaccacaagatcggcgagaggcagcatgtgctggtcactgaggag
tccttcgattcgcagcactacgtcgctcacaacaagttctacgagcaggttctggtgccc
aagaagccagagttcaaagggaagatgatcgaggtggatatatacgaggctgggaagcac
tacatgaagggccggccggtggaggacgcgcaggtctttaccccctccatcgctcagcct
cttcagaagggacaggtgtctggactccctcaggagctgaaggtgacccatcagaatggc
gcctgtgcctcggtggcttcctctgcgctcgtgggacgctcctggaggtttgacgctgat
ggactcaagctgttgtcattgggactcgctctggctgcagtaatcgtggctcttgtgatt
gagaagctccactga
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