Carassius auratus (goldfish): 113082966
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Entry
113082966 CDS
T07313
Name
(RefSeq) hemicentin-1-like isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113082966
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
caua04090
]
113082966
04091 Lectins [BR:
caua04091
]
113082966
CD molecules [BR:
caua04090
]
Proteins
113082966
Lectins [BR:
caua04091
]
I-type lectins (Siglecs)
113082966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
ICAM_N
C2-set_2
Motif
Other DBs
NCBI-GeneID:
113082966
NCBI-ProteinID:
XP_026110136
Ensembl:
ENSCARG00000033473
UniProt:
A0A6P6NPF6
LinkDB
All DBs
Position
5:complement(24764322..24812333)
Genome browser
AA seq
616 aa
AA seq
DB search
MFQHLIVYLFAVSQLVSLTGAEDECPLQLNPQRVVVRYGGSVEVNCNTSVANKGMGWEAS
EGGMPMTKNQSLITWRVSELTEWDIKPVCYINPNKGAQCQVKLPVTVYKTPDSVSISTVN
HTEPMKEGQQYELQCDVHDVAPVQYLTVKWYKGKTLMNETTFTDTDKTPDNKTVTLLIRP
DRADDGAQYRCEAELDLGAEGPQPPPTYSSEPLNVEVYYKPQHSSSTETIIKDDKVMLDC
TVKANPAPDYTWSSDHLKEKISSSVIKSSALSPGKYTCTTSNSLGRDSKVFILKSTGAQD
ECPLQLNPQRVVVRYGGSVAVTCNTSVAHKGIGWEASERLVPMTRNQSLITWRVSELTEW
DINPYCYINPNKGAQCQIELPVTVYKTPDSVSISTVIHTEPMKEGQQYELQCDVHGVAPV
QYLTVKWYKNQTLLNQTTFSDTIETPVNKTVTLLIRPDRADDGAQYRCEAELDLGAEGPQ
PPPKINSTEPLNVEVYYKPRHSSSTETIIKDDKVMLDCTVKANPAPDYTWSSDHLNLNIS
SSVIKSSALSPGKYTCNATNTQGSDIKVFIVKSTGTRHTFWTVLIVFLLLVTLIVIILFC
FFSSFLMKCCDINTLK
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaacatttgattgtttatctcttcgcagtttcacagcttgtgagtctcacaggt
gcagaagatgaatgtcctcttcagctcaacccacagagagttgttgtgagatacggcggt
tctgttgaagttaactgtaacacttcagtcgctaataaagggatgggatgggaagccagt
gagggaggaatgcctatgaccaaaaaccagagtctgatcacatggagagtgtcagaactg
acagaatgggacataaagccagtctgctacataaatccaaacaaaggtgcacagtgtcaa
gtaaagctcccggtcaccgtttacaagactccagacagtgtgtccatcagcactgtgaat
cacacagaaccaatgaaagagggacagcagtatgagctccagtgtgacgttcatgatgtg
gctcctgttcagtatctcactgtcaaatggtacaaaggaaagactctgatgaatgaaacc
accttcactgacactgacaagaccccagataataaaactgtcacactcctgatccgtcca
gacagagctgatgatggagctcaatacaggtgtgaagcagagctggatctgggagcagaa
ggacctcaacctcctcctacatattcatcagaacctcttaatgtcgaagtatactataaa
ccacagcactccagttcaacagagaccatcattaaagatgataaggtcatgctagattgt
acagtgaaggcaaacccggctcctgactacacatggtcatcagatcatctgaaagagaag
atcagctcctcagtgatcaagtcctcagcactcagtccaggaaaatatacatgcaccacc
tcaaactccctgggaagagacagcaaagtgttcatcctaaaatctacaggtgcacaagat
gaatgtcctcttcagctcaacccacagagagttgttgtgagatacggcggttctgttgca
gttacctgtaacacttcagtcgcacataaagggataggatgggaagccagtgagagacta
gtgcctatgaccagaaaccagagtctgatcacatggagagtgtcagaactgacagaatgg
gacataaatccatactgctacataaatccaaacaaaggtgcacagtgtcaaatagagctc
ccagtcactgtttacaagactccagacagtgtgtccatcagcactgtgattcacacagaa
ccaatgaaagagggacagcagtatgagctccagtgtgacgttcatggtgtggctcctgtt
cagtatctcactgtcaaatggtacaaaaatcagactctgctgaatcaaactaccttcagt
gacaccatcgagactccagtaaataaaactgtcacactcctgatccgtccagacagagct
gatgatggagctcaatacaggtgtgaagcagagctggatctgggagcagaaggacctcaa
cctcctcctaaaataaattcaacagaacctcttaatgttgaagtatactataaaccacga
cactccagttcaacagagaccatcattaaagatgataaggtcatgctagattgtacagtg
aaggcaaacccggctcctgactacacatggtcatcagatcatctgaacttgaacatcagt
tcctcagtgatcaagtcctcagcactcagtccaggaaaatacacgtgcaacgccacaaac
actcagggaagtgacatcaaagtgttcatcgtcaaatctacaggtactcgtcacacattc
tggactgttcttattgtcttcctcttgctggttacattgattgttatcatcttgttttgt
tttttttcttcttttttaatgaaatgttgtgacattaacaccctgaagtag
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