Carassius auratus (goldfish): 113092831
Help
Entry
113092831 CDS
T07313
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A-like isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04020
Calcium signaling pathway
caua04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113092831
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113092831
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113092831
Ion channels [BR:
caua04040
]
Ligand-gated channels
Glutamate (ionotropic)
113092831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
113092831
NCBI-ProteinID:
XP_026114418
Ensembl:
ENSCARG00000028049
UniProt:
A0A6P6P0K3
LinkDB
All DBs
Position
1:complement(17502918..17589333)
Genome browser
AA seq
1482 aa
AA seq
DB search
MAHFNHGEASSLTPRDTQEHKKVRWNCNDMGGLKPGMMGAVVWLMVLWGLLGWSEAAEKP
PSLSVAVILGQTPTVSESALRPARGIGAPLDVTVLSIQVNQTDPGSMLTHLCELMSRQRL
HGLVYGDGTDQEAVAQMLDFVSSQTSMPILGIHGGSAMTMAEKDVSSSFFQFGASLQQEA
LLMLSIMEEYDWHIFSVVTTKFPGFQEFIATIRATVDQSFIRWDLQSVVTLDGVGEPEDR
AHVQLKRIQSPVILLYCSKNEAALVMEEARSLGLTGAGFVWIVPSLPTGNLERTPEAFPM
GMISVAYDEWDYPLETRVQDAVGIISSAAAAMFREEGRIPDGTASCYGQSEKLEVPPSAL
RRYMMGVNLGGRDHSFMDDGYQVNPKLVVIVLNTKREWEKMGRWENHTLKLKFPVWPRYN
SFGDIDADENHLSIVTLEERPFVIVDDVDILTGTCMRNSVPCRKHIKNNTTEGSYIKQCC
KGFCIDILKKIARNVKFTYDLYLVTNGKHGKKINNMWNGMVGEVVYKKAVMAVGSLTINE
ERSEAIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVTAIAVFLF
EFISPLGFNRNLAQGKDPHGPSFTIGKAVWLLWGLVFNNSVPVQNPRGTTSKFIVSVWAF
FAVIFLASYTANLAAFMIQEEFVDQVTGLSDRKFQSPYSYSPPFRFGTVPNGSTERNIRK
NYPDMHQYMVKYHQTGVQDALVSLKTGKLDAFIYDAAVLNYMAGRDDGCKLVTIGSGYVF
ATTGYGIALQKGSYWKRLVDLAILGIIGDGEMEELEAQWLTGICHNEKNEVMSSQLDVDN
MAGVFYMLAAAMTLSLITFVWEHLFYWRLRYCFTGLCSGRPGMLFTISRGIWSCIHGVHI
EMKKAPELGFSPQANMLHLLKTAKEITTLGVTSPKRPVSSILRPTTGLMELMDGAKGNNL
AQKNTPYSNTSTMLSNRHKEPLNNTLLPGQRALSLTDAQPGVAGNGGSVGGGETTRPPAS
KPRALWKKSVETLQKNQGPGDNSPPSVQQPTETLPMKSQRYLPEDAPARSDISDCSSRVE
LQKQHKLKETLRKRNRLPRDLSDVEISTLRSQPSQQSNHSAQIYSQSSQGSQIYTIDSID
QDYGLHYPDIFNDHNDNKHRPSSSSEQQPILQLNSSLLSQAHEPEVMQTTIAKDKKYNTC
GKPGGAGSITGGSGSTQDPRQTHCRSCLSKLSSYSGLYTVRSPQYRCDACLHSGNLYDIS
EDQFLHPNGRGTGGGSVDRAFSPFLPQPDASFTAYLPQSDQEGDGLISHYQNEGVIIRQH
SYENLPQKSSSRRVSLQDNTPYANVPSATLIPDKPPKNQSVHLNNTLAGVGVSGLGIGRR
SKSMYPARPTDNPFLQTLRDDQRLAHGRSSTDIYKQLVPLTLGQADGNVLGVRMPTPELY
YTEHVMPYVAPPPVATYAAPRALSAGGARRVYKRMPSIESDV
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggcacatttcaatcacggagaggcttcttcactgacacctcgtgacacgcaagaacac
aagaaagtcaggtggaattgcaatgatatgggggggctgaagccaggaatgatgggagct
gtagtctggttgatggtcttatggggtttgctgggttggtcggaggctgcagagaagcct
ccttccctgagtgtagctgtgatattgggccagacccccaccgtatctgaatcagccctg
cgtccggctcgtgggataggtgcgcctctggatgtgacagttctcagtatccaggtgaac
cagacggacccaggaagcatgcttacacacctgtgtgagctcatgtcccgacagagactg
cacgggctggtctatggagatggcacggaccaggaagctgtggcacagatgctggacttt
gtttcctctcagacttccatgcccattcttggaatccatggtggctctgctatgacaatg
gctgaaaaggatgtcagttcttcgtttttccagtttggggcctccctccagcaggaggcg
ttgttgatgctttctataatggaggagtatgactggcacatcttctcggtggtcaccacc
aagttcccaggtttccaggagttcatagccaccattcgtgccacggtggaccaaagcttc
attcgttgggaccttcagagcgtagtgacgctggacggtgttggcgaacctgaggaccgt
gcccacgtgcagcttaaacgcatccagtcacccgtcatcctcctctactgctccaaaaac
gaagcagcgctggttatggaggaagctcgttcactagggctcactggggctggctttgtg
tggattgttcctagtctgccgacaggaaatcttgaacgaaccccagaagcctttccgatg
gggatgatatcggtggcatatgatgaatgggattatcccctggagacgcgtgtgcaggac
gctgtaggaattatcagttctgcagccgctgccatgttcagagaggaaggtcggatacct
gacggaacggcaagctgctacggccagtcagagaagctggaggtgccgccaagtgctctg
cgaagatatatgatgggagtcaatctagggggtagagatcattcgttcatggatgatggc
taccaagtcaatcccaaactggttgtcattgttctgaacacaaagagggaatgggagaag
atggggcgatgggaaaaccacaccttgaagttgaagtttccagtttggccacgttataac
tcattcggggacatagacgctgatgagaaccacttgagcattgtgactctagaggaaaga
ccctttgtaatagtggatgatgtggacattcttactggcacatgcatgcggaactctgta
ccttgcaggaaacacattaaaaataataccacggagggttcctatatcaagcagtgctgc
aagggcttttgcatagacatcctaaagaagattgccagaaatgtaaagttcacctatgat
ctttacctggtcacaaatggcaaacatggcaagaagatcaataacatgtggaacggcatg
gtgggggaggtagtctataaaaaggctgtaatggctgtgggctcattgaccataaatgaa
gagcggtcagaggccatagacttttctgtcccatttgtcgagacaggcatcagcgtaatg
gtgtcacggagcaatggaacggtgtcgccctctgcgtttctagaacccttcagtgcttca
gtgtgggttatgatgtttgtcatgttactcatcgtcacagcaatcgctgttttcctcttt
gaattcatcagtccactcggtttcaatagaaaccttgcacagggcaaagaccctcatgga
ccctccttcaccattggtaaggctgtctggctgctgtggggtctggtgttcaacaattcc
gttccggtacagaaccccaggggcactaccagtaaatttattgtgtccgtatgggccttt
ttcgctgtgatattcctggccagctacactgccaacttggctgcctttatgatccaagag
gagtttgtggatcaagtcacaggcctcagtgacagaaagtttcagagtccctattcttat
tcaccaccgtttcgcttcgggaccgtgcctaatgggagcacagagcgaaacatcaggaaa
aactacccagatatgcaccaatacatggtgaaataccatcagactggagttcaggatgca
cttgtcagcctcaagacaggtaaactggatgctttcatatatgatgctgctgtgctcaac
tatatggcggggcgtgatgatggctgtaagctagtaactattggcagtggctacgtcttt
gccacaacaggatatggcattgccctgcagaaaggatcctactggaaacgtctggttgac
cttgctatccttgggatcattggagatggtgagatggaagagctggaggcccagtggctg
actggtatctgtcataatgagaagaatgaagtgatgagcagtcagctggatgtggataat
atggctggtgtgttctatatgcttgcggctgccatgactctgtcgctaattacttttgtc
tgggagcacctcttctactggaggctacgttactgtttcactggtctctgttctggtcgg
ccaggaatgctcttcactatcagcagggggatttggagctgtattcacggtgtccatatt
gagatgaagaaagccccagagttgggcttcagtcctcaggccaacatgttacaccttctg
aaaacagctaaagagatcaccacccttggagttacctctcccaaacgtcccgtgagtagc
attctgcgtcctaccacgggcttgatggaacttatggatggagcaaaaggcaacaacctt
gcccagaaaaacacaccgtacagcaataccagcacaatgctcagcaaccgtcacaaagag
ccacttaacaacactctgttgccagggcaacgtgccctaagcttgacggatgctcagcca
ggtgttgctggaaatggtggctcagtaggtggaggtgagaccactcgaccaccagcctcc
aagccacgtgctctctggaagaagtctgtggaaactctacagaagaaccaaggacctggg
gataattccccaccatctgtccagcagcctaccgagaccctacctatgaagagccagcgc
tacctgcctgaagatgcacctgcccgctcagatatatcagattgttccagtcgggtggag
ttgcaaaagcagcacaagttaaaagaaacacttcggaaacggaaccgcctaccgcgggat
ctgagcgatgtggagatttcaactctccggagccagcccagtcagcaaagtaaccacagt
gctcagatctactctcagagcagccagggaagtcagatttataccattgattccattgat
caggattatgggctgcactacccagatattttcaatgatcacaatgacaataagcaccgg
ccatcctcttcctccgagcagcagccaatcctgcagctcaacagcagtctgctgtcccag
gcccatgaaccagaagtgatgcaaaccaccattgcaaaggataagaaatacaacacatgc
ggaaagcccggcggggcagggagcatcaccggtgggtcaggttctactcaggatccacga
cagacacactgccgtagctgcctgtcgaaattgtccagttactctgggctttacactgta
cggtctcctcagtatcgctgtgatgcctgcctgcactctggaaacctgtatgacataagc
gaagatcaattccttcatccaaatggacggggcactggaggcggaagtgttgacagggcc
ttctctccttttctccctcagcctgatgcttccttcacagcctatcttccccagagtgac
caagaaggcgatggtcttattagtcactaccagaatgagggtgtaatcatccgtcagcac
tcatatgagaatctgccccagaagagttcgtcacggcgggtcagtctgcaggacaacaca
ccatacgccaatgttccctcggcgactctgatcccggacaagccccccaaaaatcagtct
gtccacctaaacaacacgcttgcgggggtgggtgtcagcggactcggaattggtcgtcgc
agcaagtcaatgtatccggcacgtccaacggacaacccatttctccagacgcttcgtgac
gaccagcgtctagctcacgggcgcagctccacagacatttataagcagcttgtgccactc
acattagggcaggctgatggcaatgtgctcggagtgaggatgccgacccctgaactctat
tataccgagcatgtcatgccttatgtagcccctccccctgtcgccacatacgccgctccc
agggcattgagcgctgggggagctcggcgtgtctacaagaggatgccaagcattgaatct
gatgtctga
DBGET
integrated database retrieval system
