Carassius auratus (goldfish): 113109311
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Entry
113109311 CDS
T07313
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04020
Calcium signaling pathway
caua04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113109311
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113109311
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113109311
Ion channels [BR:
caua04040
]
Ligand-gated channels
Glutamate (ionotropic)
113109311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
113109311
NCBI-ProteinID:
XP_026128718
Ensembl:
ENSCARG00000011095
UniProt:
A0A6P6Q9H8
LinkDB
All DBs
Position
1:complement(12038497..12127636)
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AA seq
1765 aa
AA seq
DB search
MGVGLAMFKGLYLHSSAMLVSLHLSSSPFSDCRVLSFVSLASSSKPPFSLSLLLLSLFFF
PTCESRRGGGIGTPIGGMSQSIISPPHYPPPGVNPVGPPLPPKFGQGLSIAVILVGNSSE
VSLSEGLEKEDFLHVPLPPKVDLVTMNESDPKSIINRICALMSRNWVQGVVFGDDTDQEA
IAQILDFISAQTHIPILGIRGGSSMIMAAKDDHSMFFQFGPSIEQQASVMLNIMEEYDWY
IFSIVTTYYPGYQDFVNRIRSTVENSFVGWELEEVLLLDMSVDDGDSKIQNQMKKLQSPV
ILLYCTKEEAMTIFEVAHSVGLSGYGYTWIVPSLVTGDADNVPSVFPTGLISVSYDEWDY
GLEARVRDAVAIIAMATSTMMLDRGPHTLLKSGCHGTPDKKGSKSANPNEVLRYLMNVTF
EGRNLSFSEDGFQMHPKLVIILLNKERQYERVGKWENGSLSMKYHVWPRFELYSDAGERE
DDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKIQNQTRDSGIYIKRCCKGFCI
DILKKIAKTVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLTINEERSEV
IDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSP
VGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIF
LASYTANLAAFMIQEEYVDQVTGLSDKKFQHPNDFSPPFRFGTVPNGSTERNIRNNYKEM
HSYMTSFHQKNVNEALHSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGY
GIAIQKDSGWKRAVDLAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDVDNMAGVF
YMLGAAMALSLITFIAEHLFYWQLRFCFMGVCSGKPGITFSISRGIYSCIHGVQIEENKS
ALNSPSATMNMSMNNTHSNILRLLRTAKNMTSVPGVNGSPRSALDYSHRESAVYDISEHR
RSLVGHTDCKPPPYLPEDNMFSDYVSEVERTFGNLHLKDSNLYQDHYLHHHGGTGSELAL
GMSGPLPNRPRSLGSASSLEGGYDCDSLGGGVAPIFTTQPRQSLTHRNREKFDLIAGHPT
QSSFKSGLPDLYGKFSFKGGASSSGFIAGHDRYCGGGGVGSGGDDGNIRSDVSDISTHTV
TYGNLEGHGKRRKQYRDSLKKRPASAKSRREQDEIELGFRRRPHHTIHHHHHHHPATQAH
RSATPPVERKSQRGGNCTSYLFRDKENLRDFYVDQFRAKEGATPWEHLDLSDAPGMGGGV
GLGGSSCSGVVSSGGAGGACTSLVPMEDFLKGKSKKTECKGGMGGGSPGQQGHACWEKGI
GGVGGLAGGDWECRNCHSGGVGSGGSKPVCMHGGGGVGGTSGGSGQISSRPSSASCKRCD
SGKKPGNLYDISEDNHHLLDQTGGKHPLESGKGGGGTGAQTQVQRRKFGPGGKVLRRQHS
YDTFVELQKEGAGRMGGFGGSGGASMLPPPRSVSLKDKDRYMDGASPYAQMFEQYAGGER
ETSYFGDRGKGGGSSFSLFRGGEGGLHRRSVGERDMRDRDRGMMGGGVGGTRGVGTYSLS
KSLYPDKVNQNPFIPTFGDDQCLLHGAKSYYVKKQQAQPQQQQMPQQQQQPQLLNNSRAE
FRGSMGVTSYLPASATSGVLSNVAPRFPKDLCLGGPLINHHSGGPNNNKLLSARDGLGMG
QGQRPFNGSSNGHVYEKLSSIESDV
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgggctggcaatgttcaagggactgtatcttcactcctccgccatgcttgtc
agcctccacctctcctcttcccctttctccgactgtcgcgtcctgtctttcgtctccctg
gcttcttcctccaaaccacccttctccctctcgctccttctcctctctctcttcttcttc
cccacctgcgagtctcgccgtggaggcgggatcgggacacccatcggaggcatgagccaa
tcgataatcagccctcctcattatcctccaccaggagtcaatccagtgggtcctcctttg
ccaccaaagtttggtcaaggccttagcatcgcagtgatccttgtgggaaactccagcgag
gtgtccctctctgaaggtctggagaaagaggacttcctccacgtgcctctccctccgaaa
gtcgacctggtcacaatgaacgaatccgaccccaagagtatcataaaccgcatctgtgct
ctgatgtcacggaactgggtccagggtgtggtgtttggggacgataccgatcaggaggcc
atcgcccagatactggacttcatctcggctcagacgcacatccccatcctgggcatccgt
ggaggctcttccatgatcatggcagccaaggatgaccattccatgttcttccagtttggt
ccctctatagagcagcaagcctctgtcatgcttaacataatggaggaatatgactggtac
atattctccatcgtcaccacctactaccctggataccaggactttgtcaatcggatccgg
agtaccgtcgagaacagttttgttggctgggagctggaagaggtgctgctgttggacatg
tcagtagacgatggagactcaaagatccagaatcagatgaagaagctccagagtcctgtt
atactactgtactgcaccaaagaagaagccatgaccattttcgaggtggcgcattctgtc
ggcctctctggttatggttacacttggatcgtaccatctctggtgacaggggatgcagat
aatgtacccagcgtctttccaacaggtttgatctctgtttcctacgatgagtgggactac
ggactggaggctcgagtgcgtgatgctgtagccattattgccatggcaacctccacaatg
atgctggatcggggtcctcacacgctgcttaagtctggatgccacggcacgcctgacaag
aaaggcagcaagtcagcaaaccccaacgaggtgctgaggtacctcatgaatgtgacattt
gaagggcgcaacctctccttcagtgaggatggttttcagatgcacccaaagttggttatt
atactgttaaataaggagaggcagtatgaaagggtcggtaaatgggagaatgggtctctg
tcaatgaagtaccacgtgtggcctcggtttgagctctactcggatgctggggagcgggag
gacgaccacctgtctattgttacactggaggaggctccatttgttattgtggaggatgtt
gaccccctcagtggcacctgcatgaggaatacagtgccgtgcagaaaacagctcaaaatc
caaaatcagacaagagattcggggatctacattaaacgctgttgcaagggcttctgtata
gacatcctcaaaaagattgccaagactgtaaaattcacctacgatctctacctggtgacc
aatgggaagcatggcaaaaagatcaacggcacatggaatggcatggtcggagaggtggtg
ttgaagaatgcccacatggcagtcgggtccctgaccattaatgaagagaggtcagaggtc
attgacttctctgtgcccttcatagagactgggattagtgtcatggtctctcgtagcaat
ggcacagtgtcgccttctgcctttttagagcccttcagcgctgatgtctgggtaatgatg
ttcgttatgctgttgatagtttcagccgtggctgtcttcgtttttgagtacttcagtcct
gttggctataatcgctgcttggctgatggacgagagcctggcggtccttccttcaccatt
ggaaaagctatttggcttctttggggtttggtcttcaataactctgtgcctgtgcagaac
cccaaaggcactacgagcaagatcatggtctcggtgtgggccttcttcgctgtgattttc
ctggccagctacactgccaacctggccgcatttatgattcaagaggaatatgtggaccag
gtgacgggtctgagtgataaaaagtttcaacatccgaatgacttctcccctccattccgc
tttggtactgtgcccaatggcagcacagagagaaacataaggaacaactacaaagagatg
cactcctatatgaccagcttccaccagaagaacgtaaacgaggccctccacagcctgaag
acgggtaaattggatgcattcatctacgatgcagcggtcttgaactacatggctggacgt
gatgagggctgtaaactggtgaccatcggcagtggttatatctttgctactacagggtat
ggcattgccattcaaaaagactcaggctggaagagggcagtggaccttgccattctgcag
ctctttggagatggtgagatggaggaacttgaggccctgtggctgactggcatctgccac
aatgagaaaaatgaggtgatgagcagtcagctggatgtagacaacatggcaggtgtgttc
tacatgctgggagctgcaatggccctgtccctaatcacattcatcgcagagcacctcttc
tactggcaactgcgattctgctttatgggtgtgtgctcaggcaagcccggcatcaccttc
tccatcagcaggggcatctacagttgcatccatggtgttcagattgaagagaacaaatca
gcccttaactccccatcggccactatgaacatgagcatgaacaacacccactccaacatt
ctccgtttgttgcgtactgccaaaaacatgacctctgtgcctggggtcaatggttctcct
cgcagcgcattggactacagccatcgtgagtcagccgtttatgacatcagtgaacaccgg
cgcagcttagtaggccacacagactgcaagcctccaccatacctgccagaggacaacatg
ttcagcgactatgtaagcgaagtggagaggacttttgggaatttgcacctgaaggacagc
aacctgtaccaggatcattatctacaccaccatgggggcacgggatctgaactggctctt
ggtatgtcgggtcccctgcctaatcgacctcgtagcttagggagtgccagttcattggag
ggtgggtacgattgtgacagcttagggggaggggtagcgcccatcttcaccacccagcca
cggcagtcactgacacatcggaacagggaaaagtttgacctgatcgcgggtcacccaacc
cagtcaagcttcaagtctggcctgcctgatctatatggaaagttctccttcaagggtggg
gcatccagttcagggtttattgcaggacatgacaggtactgcgggggaggtggggtggga
tcaggaggggatgatggaaacattcgatccgatgtgtctgatatctccactcacaccgtg
acctacgggaacctcgaggggcatggcaaaaggcgcaaacagtacagggacagcttaaaa
aagagacccgcttctgccaaatctcgccgtgagcaggatgagattgagcttggcttcagg
agacgaccccaccatacaatccatcatcatcaccaccatcatccagcaacacaagcccac
cgctcagccaccccacccgtggagcgcaaaagccagagaggtggtaactgcacctcctat
ttattcagagacaaagagaatttgagggacttttatgtggaccagtttcgagccaaggaa
ggggcaaccccatgggaacatttggatttaagtgatgctccaggaatgggtggaggagtg
ggactgggcggaagcagttgcagtggagtagttagtagcggtggtgctgggggagcgtgc
actagtttggttcccatggaagatttcctgaaaggtaaatccaagaagacagaatgtaag
ggtggaatgggaggaggatcacctgggcaacagggccatgcatgctgggaaaaaggcatc
ggaggcgtgggagggttggccggaggggattgggaatgtcgcaattgccacagtggaggg
gttggaagtggaggaagcaagccagtttgcatgcatgggggaggcggagtagggggaacc
agtggagggagtggacaaatctcaagccgtcctagttcagcctcctgcaagcggtgtgat
tcgggcaagaaaccgggcaacttgtatgacatcagtgaggacaaccaccacctcttggat
caaactgggggcaagcaccctctggagagtggaaagggagggggaggcacaggggcccaa
acccaggtacagaggcggaaatttggcccaggtggtaaggttttgcgcagacagcattct
tatgacacatttgtagagctgcagaaggaaggggcgggcaggatgggtgggtttggaggc
agtggcggagcatcaatgcttcctccaccccgaagtgtgagcctaaaagacaaagaccgc
tacatggatggcgcaagcccctacgcacagatgtttgagcagtatgcgggaggggagcgt
gagacatcatattttggggacagagggaagggtgggggttcatcatttagcttattccgt
gggggtgaaggtgggttgcaccgtcgctccgtgggtgagagagacatgagggacagggat
agaggcatgatgggaggaggtgtgggcggtacccgaggggtcgggacttactccttgtct
aaatctctctacccagataaggtgaaccagaacccattcatcccaaccttcggcgatgac
cagtgtctattacatggtgccaaatcatactacgtcaaaaagcagcaggcacagccgcag
cagcaacagatgccacaacagcagcagcaaccacagctcctcaacaacagtcgggctgaa
ttccggggctccatgggggtgacttcctatttgcctgcctccgcaacttctggggtgttg
tccaatgtggcccctcggttccccaaggacctatgtctgggcgggcctcttatcaaccac
cacagtggaggacctaacaacaataagctgctgtctgcaagggatgggttaggaatgggt
caaggacagagaccatttaatggctcgagcaacggacatgtttatgagaagctttccagt
atagagtctgatgtctga
DBGET
integrated database retrieval system
