Carassius auratus (goldfish): 113111376
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Entry
113111376 CDS
T07313
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03020
RNA polymerase
caua04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113111376 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
113111376 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113111376 (polr3a)
Enzymes [BR:
caua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113111376 (polr3a)
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
113111376 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
113111376
NCBI-ProteinID:
XP_026131796
Ensembl:
ENSCARG00000009950
UniProt:
A0A6P6QEP5
LinkDB
All DBs
Position
12:967584..989984
Genome browser
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHMQVVSKNLYSQDTSHTPLQHGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSHILLTKE
EKLQFLDHLRRPGLVYLQKRGLKKKISDKCRKKTTCVHCNAFNGPVKKCGLLKIIHEKYK
TTKKVVDPMVSDFLQSFDIAIEHNKEVEALLTRAQENLNPLVALNLFRRIPNEDIPLLLM
NPESGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANIELLRKLVRNGPDLHPGANF
IQQRHMQMKRFLKYGNREKMAQELKYGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLRDTFFDRTKACQIVASILVGKDEKIKISLPPPAILKPIRLWTGKQI
FSLILKPSKSCPVKANLRTKGKQYCGKGEDLCHNDSFVVIQNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQQEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLTAKQELLDAG
YKKCDEYIEALKTGRLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFQKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFRRVLDNIRSVHSCPGEPALSRNELILTSDSIMKRKDFLC
CKDTFLEALTDTGSDKYLQEIRKFIKTVSEKIKKTRDKYGINDNGTTEPKVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIISANLDRDDDPDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICTSKLRVKPGDIAVHGEAVVCVNPRENSKSSMYYV
LQSLKQLLPKVVVQGIPEVARAVIHIDEQSGKQKFKLLVEGDNLRAVMATHGVNGNRTTS
NNTYEVERTLGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHSATK
EPNPPRRPLLFDSPDFHIPLAL
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagtttagagagacggatgtggccaaaaagataagtcacatctgtttt
ggcatgaagtcagcagagcagatgagacagcaggctcacatgcaggtggtcagtaagaac
ctgtacagccaagacacgagccacacaccgctgcagcatggagtcctggaccaccgcatg
ggaaccagtgagaaggacagaccgtgtgagacctgcgggaagaacctggccgactgtctc
ggtcactacggctatctggacctggagctgccctgcttccacgtgggatacttcaaagcc
attattgggatcctgcagatgatctgtaagacgtgttctcacatcctcctcaccaaagag
gaaaagcttcagtttctggatcacttgcgtagacccggactggtatatcttcagaagcgc
ggcctcaagaagaagatctccgacaaatgcaggaagaagaccacgtgtgtgcattgcaat
gcatttaatggccctgtgaagaaatgtggcttgctgaagatcattcatgagaagtataag
accacaaagaaggtggtcgaccccatggtgtcagatttcctccagtcatttgatatcgcc
atcgagcacaataaagaagtcgaggctcttctgaccagagcacaggaaaacctcaatcct
ctggtggcgttgaatcttttccggaggattcccaacgaggacattccccttctgctgatg
aatccagaatccgggaaacccgctgacctcatcctgacccgtctgttagtgccgcccctc
tgcatccggccctccgtcgtcagcgacctcaaatcaggcacaaacgaggacgatctgacc
atgaagttaacggaaatcatcttcctcaatgatgtcatcaagaagcaccgcatgacagga
gccaagacacagatgatcatggaggactgggacttcctgcagctgcagtgcgctctctac
atcaacagcgagctgtcgggcatcccgctcaatatggcccccaagaaatggacccgaggc
ttcgtgcagagactcaaggggaagcaggggcggtttcgtgggaacctgtctggaaagaga
gtggatttctccggcagaaccgtcatctctcccgaccccaacctgaggatcgatgaggtc
gctgtcccggtgcacgtggccaaaatcctcacctaccccgagaaggtgaataaagccaac
atcgagctgttgaggaagctggtgaggaacggtcctgatcttcaccccggagcaaacttc
attcagcagagacacatgcagatgaagaggtttctgaagtacggtaatcgtgagaagatg
gctcaggagctgaagtacggtgacgtggttgagagacacatgatcgatggagacatcgtt
ctgttcaacagacagccgtctctgcacaaactcagcatcatggctcatatcgcgcgtgtg
aaacctcatcgcacgtttcgttttaacgagtgtgtttgcacgccgtacaacgctgacttt
gacggagacgagatgaacctccacctgccgcagacggaggaggccaaagctgaagcgctc
gtgctcatggggaccaaggctaatctggtcactcctcgaaacggtgagccgctgatcgca
gccatccaggacttcctgacaggtgcgtacctgctcacgctcagagacacgttcttcgac
cgaaccaaagcctgtcagatcgtcgcctccatcctggtgggaaaagatgagaagatcaag
atctccctcccgccgcctgccattctgaagcccatcaggctgtggacggggaagcagatc
ttcagtctgatactcaagcccagtaaaagctgtccggtgaaggccaacctgcgcaccaaa
ggcaaacagtactgcgggaaaggagaggatctgtgtcacaatgattcctttgtggtgatc
cagaacagtgagctgatgtgtggcagcatggataaaggaactctgggatccggatccaag
aacaacatcttctacatcctgctgcgagactggggtcaacaggaggccgccgatgccatg
tcacgcctcgcccgactggcccccgtttacctctcgaatcgaggtttctccatcgggatc
ggagacgtgacccctggacagggactcttgacggccaaacaggagctgctggacgctgga
tataagaaatgtgacgagtacatcgaagcgctgaagacgggccggttacagcagcagccg
ggctgcaccgccgaggaaacactggaggcgctgatcctgaaggagctgtccgtcatcaga
gatcacgcgggcagtgcgtgtttgagagagctggacaagagcaacagtcctctgatcatg
gctctgtgtggatccaaaggttcgttcatcaacatctctcagatgatcgcgtgcgtcggg
cagcaggccatcagcggctctcgtgttcccgacggcttcgagaaccgctcgctccctcac
ttccaaaaacactccaaactccctgctgcgaagggctttgtggcagacagcttttattct
ggtctgacccccacagagttcttcttccacactatggccggtcgagaaggtctggtggac
acggctgtgaagacggcagagacgggatacatgcagaggcgtctggtgaagtctctggag
gacttgtgctctcagtacgatctgacggtgcgcagctccaccggggacatcatacagttc
atctacggcggagacggactcgaccccgcggccatggaggggaaagatgagccgctggag
ttcagaagagtcctggacaacatcagatcggtgcacagctgtcctggtgaaccagcgctg
agcagaaacgagctgatcctaacctccgactccatcatgaagagaaaagacttcctgtgc
tgtaaagacacctttctggaggcgttgacagacactggcagtgataaatacttacaggaa
atcagaaagttcataaaaacagtttcagagaaaatcaagaagacacgcgacaagtacggc
atcaacgacaacggaacgacagaacctaaagtcctgtaccagctggacagaatcactccg
acccagctggagaagtttctggaaacctgcagggacaaatatatgagggcgcagatggag
cccggttctgccgtcggggcgctgtgtgctcagagcatcggggagccggggactcagatg
accctcaagacgtttcacttcgctggagtcgcttccatgaacatcactctgggagtcccc
cgaatcaaagagatcatcaatgcgtccaaaaacatcagtacgcccatcataagtgccaac
ctggatagagatgatgacccagacttcgctcggctggtgaaaggacgcattgagaaaact
cttctgggagagatttccgagtacatcgaggaggtgttcctgcctgatgattgtttcatc
ctggtgaagctgtcgctcgagaggattcgtcttctgaggctggaggtgaacgcagagacg
gtgcgatactccatctgtacgtccaagctgcgggtgaagccgggagatatcgcggttcac
ggagaagccgtggtctgtgtgaatcccagagaaaacagcaagagctccatgtattacgtc
ctgcagtcgctcaaacagctgcttcccaaggtggtggtccagggcatccctgaagtggcc
cgtgctgtcattcacatcgatgaacagagcggcaaacagaagttcaaactgctggtggag
ggagataacctcagggctgtcatggcaacacacggcgtcaacggcaacagaacaacatcc
aacaacacatacgaggtggagaggacgttaggcatcgaagcggcgaggtccaccatcatt
aacgagatccagtacaccatggtaaaccacgggatgagcatcgaccgcagacacgtgatg
ctgctggcggatctcatgtcctataagggtgagattctgggcatcacccgcttcggtctg
gccaagatgaaggagagcgttctcatgctggcctcctttgagaagacggcggatcatctg
tttgatgcggcttatttcggacagaaagactcggtctgcggtgtctccgagtgcattata
atgggaatccccatgaacatcggcactggactctttaaacttttacacagcgccacgaag
gagccgaaccccccgcgcagacctttgctcttcgacagtcctgacttccacatccctctg
gctttataa
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integrated database retrieval system
