Caulobacter sp. S6: KCG34_04125
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Entry
KCG34_04125 CDS
T07744
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
caul
Caulobacter sp. S6
Pathway
caul00540
Lipopolysaccharide biosynthesis
caul01100
Metabolic pathways
caul01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
caul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
KCG34_04125 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
caul01005
]
KCG34_04125 (rfaD)
Enzymes [BR:
caul01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
KCG34_04125 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
caul01005
]
Core region
KCG34_04125 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QUD89082
UniProt:
A0A975G234
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All DBs
Position
910235..911236
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AA seq
333 aa
AA seq
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MTRRLVLVTGGAGFIGSNIVADLAGDNNFEVAVCDRLRNADDGKWRNIAKHPIVDFVAPH
EIFPWLYRNADRLLAVVHMGAISSTTEPDADHIIHTNFGLSRDLFRWCAEHRQRFIYASS
AATYGDGSLGFVDRDDPDSLAALRPLNAYGWSKALFDTFAAREAAAGRHPAQWVGLKFFN
VYGPNEEHKRSMRSIASQIWPNIQNNVQVKLFKSYRSEYPDGGQLRDFVYVRDAVSVIRW
LINTPEVNGIYNLGSGTSRTFVALAEAAFKAAGKIPDIVYTDMPVSIRDKYQYFTQARME
KLYQAGYSGNSTSLEDGIYDYCKNYLNNADPYR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacacgaaggctcgtcctggttacgggtggcgccggattcatcggttccaacatcgtc
gccgaccttgctggcgacaataatttcgaggtcgcggtatgcgatcgcctacgaaatgcc
gacgatggaaaatggcgaaacattgcaaagcaccccatcgtggattttgtggcgccgcat
gagatctttccttggctctatcgcaacgcagatcgacttttggcggtcgttcatatggga
gccatctcgtccacaaccgaacccgatgccgatcacataattcataccaacttcggactc
tcgcgcgaccttttccgctggtgcgccgaacaccgtcagcgcttcatctatgcctcgtcg
gcggcgacctatggggacggatcgcttggtttcgtcgatcgcgacgatcctgatagcctg
gccgccctgcgcccgttgaacgcctatggctggtcgaaggcgctgttcgacactttcgcc
gctcgggaagcggcagccggcaggcacccagcacaatgggtcggcttgaagtttttcaat
gtctacggaccaaacgaggagcacaagcgaagcatgcgctccatcgcgtctcaaatctgg
ccaaatatacaaaacaatgtgcaagtaaaacttttcaagagctatcgaagcgaatatcca
gatggagggcaattgagggatttcgtctacgtcagagatgctgttagcgtcattagatgg
cttattaatacgccagaggttaacgggatatataatttaggatccggcacctccaggact
ttcgtcgcccttgccgaagctgcctttaaagcagctggaaaaattcctgatatagtctac
accgacatgccagtatccattcgggataagtatcagtactttacacaagccagaatggaa
aagctttaccaagcaggatatagtggaaattccacgtcactggaagatggaatttatgat
tactgcaagaattatctgaacaacgcagatccatatcgctga
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