Candida auris: CJI96_0002311
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Entry
CJI96_0002311 CDS
T04850
Name
(RefSeq) DNA-directed_RNA_polymerase_III_subunit_RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
caur
Candida auris
Pathway
caur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
caur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CJI96_0002311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caur03021
]
CJI96_0002311
Enzymes [BR:
caur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CJI96_0002311
Transcription machinery [BR:
caur03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CJI96_0002311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
40028997
NCBI-ProteinID:
XP_028891068
LinkDB
All DBs
Position
2:1845561..1849928
Genome browser
AA seq
1455 aa
AA seq
DB search
MKDVVVDVAPKCIKGLEFSALSSKEIVAQSEAEVTTRDLYDLEKGRQVKESGALDTRMGT
SSNAVECATCHGNLASCHGHFGHVRLALPVFHVGYFKQIIRVLQCICKSCGAVLLDQNTK
RKFLADLRRPNIDNLRRMKILNKVVDQCKKQRRCLQCNHVNGVVKKAASGAGPAALKIFH
DTFRFIGKKPTPEKEFWDKEFDEVFMRNPELEKFAKRVYEDLNPLKVLNLFKQVSPLDCE
LFGIDASKGGRPETYIWRYLPAPPVCIRPSVMMDAQSNEDDLTVKLTEIVWTSSLIKAGI
EKGISINNMMEQWDFLQLSVAMYINSDAANPALLPGNMGSGSKSAKPIRGFCQRLKGKQG
RFRGNLSGKRVDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNRQKLQKLILN
GPNVHPGANYILKQNEVAKRNLKFGDRVKLAKNLRIGDVVERHIEDGDVVLFNRQPSLHR
LSILSHYAKVRPWRTFRLNECVCTPYNADFDGDEMNLHVPQTEEARAEAINLMGVKNNLL
TPKSGEPIIAATQDFITGSYIISHKDSFFDRASLVQLLSMMSDADLHFDIPPPAIFKPVA
LWTGKQVFSLLIRPNKKSKVVINVDAKNKTFHPPAKGLPNEMSPNDGFVVIRGSQILSGV
MDKSTLGDGKKHSVFYTILRDYGPDEAANAMNRMAKLCARFLGNHGFSIGINDVTPGSDL
KSKKEYMVEQAYAKCDELIDLYNRGKLETQPGCNEEQTLEAKISGLLSKVREEVGDVCIR
ELDSLNSPLIMATCGSKGSTLNVSQMVAVVGQQIISGNRVPDGFQDRSLPHFTKMSKTPQ
SKGFVRNSFFSGLSPPEFLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSASYDQT
VRNSSNGIVQFTYGGDGLDPLDMEGDAQPVNFNRQWDHAFNVTFDISDRSLRPYEIMDVV
DNVLRPLEDKLVRYDNLGRVVDVDIGDRVELIDQKDAERSFYKSLREYVHKKATQLAQYR
ENKHLRPYLTKIDDDVDMDVDEVEDEVNTHAVNQLLKISEKCVIEFLNQCFYKYKRAKVE
PGTAVGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKVISTPIINSV
LVNDDDEVAARVVKGRIEKTLLRDVAFYIEDVYKNDMAFLSIKIDLKTIEKLQLELTLDN
IRQAIANAPKLKIANNEVSIYGKDRINVLVTHRESKSESLAKTASSDYRLAEANTTLFFR
MQHLKRALPDVVIKGLPNISRAVINIRDDGKKELLVEGYGLKQVMATDGVVGTKTTTNHI
LEVYETLGIEAARSSIIGEIDYTMSKHGMSVDPRHIQLLGDVMTYKGEVLGITRFGLSKM
RDSVLQLASFEKTTDHLFDAAFFMKNDKIEGVSECIILGQTMGIGTGAFKMVKTSNYDES
KMKPKETLFESLCVA
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgtcgtcgttgacgtggcgcccaagtgcatcaagggccttgaattcagcgct
ctctcgtccaaagagatcgtggcgcagtccgaggccgaggtcaccactagagacctctac
gacttggaaaagggcagacaagtcaaggaaagtggtgctttggacacacgaatgggaacc
tcgtccaacgcagtcgagtgtgctacgtgccatggtaacttggctctgtgccacggtcat
tttggccacgttcgcttagcacttcctgtgtttcacgtgggttacttcaagcagatcatc
agagtgctccagtgtatctgtaagctgtgtggagcggtgttgttggaccagaacacgaaa
cgcaagttcttggccgacttgagacgccccaatattgacaatttgcgcagaatgaaaatc
ttgaacaaagtggtggaccagtgcaaaaaacagagaaggtgcttgcagtgtaaccatgtc
aacggcgtggtgaagaaagctgcgagtggcgctggaccggctgctttgaaaatttttcac
gacaccttcaggttcattggcaagaagcctactcctgaaaaggagttctgggataaggag
tttgacgaggtgtttatgaggaatccagagctcgagaaatttgcaaagagagtgtatgag
gacttgaatccgctcaaggttttgaatttattcaagcaggtgtcgcctcttgattgtgag
cttttcggcattgacgcctccaagggcggcagacctgaaacgtacatttggcgctacttg
cctgctcctcccgtgtgtatacgaccttcggtgatgatggacgctcagtccaacgaggac
gatttgacggtgaaattgaccgagatcgtctggacctcctccctcatcaaggcaggtatc
gagaaaggtatctctattaataacatgatggaacagtgggactttttgcagctttcggtc
gccatgtatatcaactccgatgcagcaaacccggcgctactacctgggaacatgggcctg
ggcctgaaaagtgccaaaccaatcagaggcttctgtcagagattaaagggtaagcagggt
cgtttcagaggtaatctttccggtaagagagtcgacttttcaggtcgtacagttatttcg
ccagatccaaatttgaaaattgatgaagttgccgttcccgatcgagtggccaaagtgttg
acctaccctgaaaagtgtactcgatacaaccgtcaaaaattgcagaaattgattctcaac
ggccccaatgtgcatccgggtgctaactacattttgaagcagaatgaggttgccaaacgc
aacttgaagttcggtgacagggtcaagcttgccaagaatctccgaatcggcgacgtcgtt
gagcgtcacattgaagacggtgatgttgttcttttcaacagacagccttctttgcataga
ctttccatcttgtctcactacgccaaggtcagaccatggagaaccttcagactcaacgag
tgtgtttgtacgccatacaacgctgattttgatggtgacgagatgaacttgcatgttcct
caaactgaggaagccagagctgaagccatcaacttaatgggggtgaaaaacaaccttttg
acgccaaagtctggtgagcctatcattgctgctactcaggatttcatcactggctcgtat
attatctcccacaaggattctttcttcgatagagcttctttggttcagctcttgctgatg
atgtcagacgcagacttgcattttgacattcctccaccggctatcttcaagcccgtggct
ctttggacaggtaagcaggtattttccctcttgatcagacccaacaaaaaatccaaagtt
gtcatcaatgtggatgcaaagaacaagactttccatcctcccgctaaaggtcttccgaac
gaaatgtcgcccaacgatggttttgtggtgatcaggggatcccaaattctcagcggtgtc
atggataagtccacattgggtgatggtaaaaagcactctgtgttttatacaattctcaga
gactacggtcctgatgaggcagcaaatgccatgaatagaatggccaagctttgtgcccgt
tttctcggaaaccacggtttctccattggtattaatgatgtcacaccaggttctgatctt
aagctgaagaaagagtacatggttgagcaagcctacgccaagtgtgatgagctcattgat
ctttacaacaggggtaagttggaaacacaacctggctgtaacgaagagcagacgttggaa
gcgaaaatcagtggtttgctttccaaagttcgtgaagaagtcggtgacgtctgtatcaga
gagcttgattccctcaactctccattgatcatggctacatgtggttccaaaggttccacg
ttaaatgtttcgcagatggtcgctgttgtgggtcagcaaattatctcgggtaacagagtg
cctgatggtttccaggacagatccttgccccacttcacgaaaatgtcgaagacaccccag
tccaagggttttgtacggaactctttcttcagcggtttgagtcctccagagtttcttttc
cacgctatttcgggtagagaaggtttggttgatactgccgtgaagactgccgaaacaggt
tatatgtctagacgtcttatgaagtctcttgaggatctttctgctctgtatgatcagacg
gtgagaaactcgctgaatggtatcgttcagttcacttatggtggtgatggcttggatcct
ttggacatggagggcgatgctcagccagtaaactttaacagacagtgggatcatgcgttt
aacgtcacttttgacatcagcgatagaagcttgagaccatatgaaattatggatgttgta
gacaacgtcctcaggccattggaggacaagctcgtgaggtacgacaaccttggaagggtt
gttgatgttgatattggtgatcgtgtggagttgatcgaccagaaggatgccgagagatct
ttctacaagtcacttcgtgaatatgtgcataagaaggctactcaacttgcccagtacaga
gagaataagcacttgagaccatacttgacgaagatcgatgatgatgttgacatggatgtg
gacgaggtagaagacgaggtcaacacccatgctgtcaatcaattgctcaagatatcggaa
aaatgtgtgattgagttcctcaaccagtgcttctacaagtacaagagggccaaggttgaa
ccaggcaccgcagtgggtgcgattggtgcacactctatcggtgagccaggtactcagatg
acgttgaagacattccactttgctggtgtggcgtccatgaacgtcacgttgggtgtgccc
cgtatcaaagaaatcatcaacgccgcaaaggtcatttccacgccgattatcaactctgta
ttggtcaacgacgacgatgaggttgctgcgagagttgtcaaaggaagaatagagaaaacc
ttgcttcgagatgttgcattctacattgaggatgtctacaaaaatgacatggcattcttg
tcgatcaagattgatctcaaaactatcgaaaagctccagttggagttgactttggacaac
attcgccaggctatcgccaacgctcctaaacttaagatcgccaacaacgaagtgtccatc
tatggtaaagacaggatcaacgttttggtgacccacagagagctgaagctggagagcttg
gccaagacagcgctgtcagactacagattggccgaggccaacaccacgcttttcttcaga
atgcagcatctcaaaagagctcttcccgacgttgtcatcaagggtcttcccaacatctca
cgtgctgtaatcaacattcgtgacgacggcaagaaggagttgttggtggagggctatggc
ttgaaacaagtgatggccacagacggtgtggtgggaaccaagactaccactaaccacatc
ttggaggtgtacgagacccttggtatcgaagcagcaagatcctccatcattggcgaaata
gactacaccatgtccaagcacggtatgagcgtggatcctagacacattcagcttttggga
gatgtgatgacctacaagggtgaggtgttgggtattaccagatttggtctttctaaaatg
agagattctgtgttgcagcttgcttcgttcgagaagaccacggatcacttgtttgacgct
gccttcttcatgaagaacgataagatcgagggtgtttccgaatgtatcattttgggccag
accatgggaattggaaccggtgcattcaaaatggtgaagacgtctaattatgacgagagc
aaaatgaagccgaaggagactcttttcgagagtctttgcgtggcctag
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integrated database retrieval system
