Corylus avellana (European hazelnut): 132168853 Help Entry 132168853         CDS       T09426                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism cave  Corylus avellana (European hazelnut) Pathway cave03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cave00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     132168853  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cave03400]     132168853 DNA repair and recombination proteins [BR:cave03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      132168853 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor LBR_tudor DUF3437 Motif Other DBs NCBI-GeneID:  132168853 NCBI-ProteinID:  XP_059435898 LinkDB All DBs Position ca2:complement(16114670..16124777) Genome browser AA seq 1317 aa AA seqDB search MAPSRRQSSGRSPLVNPQRQITSFFSKTASSPSPTLSKRSPKTVPDSVPKNPKSNPNPSP SSSPGPTTPSPLQSKPKKPILVIGGSPSTPVEKRSYGEDVAGRRIKIYWPLDQAWYEGSV KSFDKDANKHLVQYDDAEEELLDLEKEKIEWVDESVKKKLKRLRRGSSDSKDGEEVEIVK EEEEGVKEFKRSRRRGGRVVVEDEDEEVESDGGGGGDGHDDSSDEDWGKNVEEEVVEDGE EDMDLEEENEGVKGSKAKRDGLKKRKVSEGEKLGSAKKSKNGSGGSGGGVGKGGLKVSSV EPAGNGGKASNDLGNALMGDAAERFGMRDAQKFRFLGEERRDAKRRRPADASYDPRTLYL PPDFIKSLSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHIGSKELHLQYMKGEQPH CGFPEKNFSMNVEKLARKGYRVLVVEQTETPEQLEFRRKEKGSKDKVVKREICAVVSKGT LTEGEMLSANPDASYLMAIAEGCQRLVNQNADRIFGVCVVDVATSRVILGQFGDDTECTA LCCLLSELRPVEIVKPAKQLSPETEKVLLRHTRNPLVNELVPLLEFWEAEKTVHEVKSIY SRIVQESVSGSLTEYLPDVLSELVRAGENGTCALSALGGTLFYLKQAFLDETLLRFAKFE LLPCSNFGNIVSKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTW LARPLYHPESIRERQDAVSGLRGVNLAFALEFRKALSRLPDMERLLARVFASSEANGRNA NKVTLYEDAAKKQLQEFISALRGCELMAQACSSLGVILESVESRVLHHLLTPGNGLPDIH SVINHFKGAFDWVEANKSGRIIPHEGVDAEYDSACKKVKEFELSLTKHLKEQRKLLGDAS ITYVTVGKEAYLLEVPESLRGSIPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKES SLKSILQRLIGHFCEHHDKWRQLVSATAELDVLISLAIASDYYEGPTCRPIILGSSNPDE VPCLSAKNLGHPVLRSDSLGKGAFVPNDVSIGGSDHASFILLTGPNMGGKSTLLRQVCLA VVLAQVGADVPAESFELSPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLSSATRNSLV ALDELGRGTSTSDGQAIAESVLQHFVHKVQCRGMFSTHYHRLAVDYQKDPKVSLCHMGCR VGNKVGDVEEVTFLYRLTPGECPKSYGVNVAWLAGLPDSVLQKAAAKSIEFEGAYGKHQK KFEDDLSHQSLVDEMVVFVRKFMDTAANLSCHKSPESIGTSSLTELQHRAQILLQKG NT seq 3954 nt NT seq  +upstreamnt  +downstreamnt atggcaccgtcgcggcgccagagcagtggtcgatcgccactcgtcaatccgcagcgccaa atcacttcgttcttctccaaaacggcgtcgtctccttctccgactctttccaagcgaagc cctaaaactgttcctgattcagtccctaaaaaccctaaatccaatcccaatcctagtcca agctcgagccctggccccaccaccccttcccctctccaatccaagcccaagaagcccatc ctggtcatcggcggatctccgtcgactcccgttgagaagagatcctacggcgaggatgtt gcgggaaggaggatcaagatctattggccgttggatcaggcctggtacgaaggttctgtg aaatcatttgacaaggatgctaacaagcatttggttcagtacgacgacgctgaggaggag ttgttggatttggagaaggagaagattgagtgggtcgacgagagcgtcaagaagaaactg aagaggttgcgacggggttcttcggattcgaaggatggtgaggaggtagagatcgttaag gaggaggaggagggtgttaaggagttcaagcggtcgcggcggcgaggtgggagggttgtg gttgaggacgaggacgaggaggtggagagtgatggcggtggcggtggtgatggtcatgat gattctagcgatgaggattgggggaagaatgtggaggaagaggtggttgaggatggtgag gaagatatggatttggaggaagaaaatgaaggggtgaaggggtcgaaagcaaagcgtgat ggattgaagaagcggaaggtgagcgagggagagaagttggggtctgctaagaagagtaag aatggtagtggtggtagtggtgggggtgtgggtaagggagggttgaaggtttcttcggtg gagcctgctggtaatggtgggaaggcatctaacgaccttggtaatgccctaatgggtgat gctgcagaaaggtttggtatgcgtgacgctcaaaagtttcgcttccttggggaggaacgt agggatgcaaaaagaagacgtccggcggatgcaagttatgatccgaggacactttacttg cctcctgattttataaagagtttatcaggtggtcagagacaatggtgggagttcaagtca aagcatatggacaaggttttgtttttcaagatgggaaaattttatgaactttttgaaatg gatgcacatattggatcaaaagagcttcacttgcaatatatgaagggagaacaaccacat tgtggattcccagaaaagaacttctcaatgaacgtggaaaaattggctagaaagggttat cgagttcttgttgtagagcagacagaaacccctgaacagctagagtttcgtcgcaaagag aaaggttccaaggataaggttgtgaaacgtgaaatatgtgccgtggtttctaaaggaaca ctgactgagggagagatgctgtcagcaaatcctgatgcttcttacctaatggcaatagct gaaggctgtcagagattggtgaaccaaaatgcagaccgtatttttggtgtttgtgttgtt gatgttgctaccagcagggttattcttggtcagtttggggatgatacagagtgcactgcc ttgtgctgtctcttgtctgagttaaggccggtggaaattgtaaaacctgccaaacagctc agccctgaaacagagaaagtattgctgagacatacaagaaatcctttagtgaatgagtta gttccactcttggaattctgggaagctgagaaaactgtgcatgaagtcaaaagcatctac agccggattgttcaagagtcagtttctggatctttaactgagtacctaccagatgttctt tcagagctagtgagggcaggcgagaatggcacctgtgcactttcagctcttgggggcacc cttttctatcttaagcaggctttcctggatgagacattacttcgttttgcaaagtttgag ctacttccatgctctaatttcggtaatattgtctcaaaaccatacatggttcttgatgca gctgccctggagaatcttgagatttttgagaatagcagaaatggagactcatcagggacg ctctattcccaattgaaccattgtgtgacagcctttgggaagaggttgctgaaaacatgg ttggcaagacctttatatcatccagagtcgattagggaacgccaagatgctgtttcaggt ttacggggagttaatctagcttttgcacttgaatttcgaaaagcattgtccaggctgccc gacatggagcggttacttgcacgtgtttttgctagcagtgaagcaaatggaaggaatgcc aacaaagtgactctatatgaggatgcagcaaaaaagcagcttcaagagtttatatcggct ttacgtggttgtgaattgatggcccaagcatgttcttcgcttggtgttattttggaaagt gttgaatctagagtgcttcatcatttgttaacacctggtaatggtctccctgacatccat tcagttataaatcatttcaagggtgcctttgattgggtggaagccaataagtcaggacga ataatcccccatgaaggagttgatgcagagtatgactctgcctgtaaaaaagttaaggag tttgagttgagtttaacaaaacacctcaaggaacagcgtaaactacttggagatgcatct attacatatgtcacagttggaaaagaggcatacctcttagaagtaccagaaagtttgcgt ggaagcattcctcgtgattatgagttacgatcatctaaaaagggcttcttcaggtattgg actccaaatatcaagaagttgttgggagagctctcacaagctgaatctgaaaaggaatcc tcgttgaaaagcattttgcagaggttaataggacatttctgtgaacatcatgataagtgg agacagttggtttctgctactgcagagctggatgttttgatcagtctagcaattgcaagt gactattatgaagggccaacgtgccggccaattatattaggctcatcaaatccagatgaa gttccatgcctttctgcgaaaaatttgggacatcctgttcttagaagtgattctttaggc aagggtgcatttgtccccaatgacgtttcgattggcggttctgatcatgccagcttcatc cttctcactggtcctaacatgggtggtaaatcaactcttcttcgccaagtttgcttggct gtagttttggcccaggtaggagcagatgttcctgcagaaagctttgagttgtcacctgtg gaccgaatatttgttcggatgggtgccaaagatcatattatggcaggccaaagtacattt ttaacagaactttcagaaactgcattaatgctgtcttcggcaacacgtaattcactggtg gcactagatgaacttggacgcggaacatcaacttcagatggacaagccattgctgaatca gtccttcaacattttgttcacaaagtgcagtgtcgaggaatgttttctactcactatcac cgattagctgttgactatcagaaagatcccaaggtttcactctgccatatgggatgccga gttggaaataaagttggagatgtggaagaagttacatttctttacaggttgacacccggt gaatgccctaaaagctatggtgtcaatgttgcgtggttagctggacttcctgattccgta cttcaaaaagctgctgctaaatcgatagaatttgagggtgcatatggtaaacaccagaag aaatttgaagatgatttgtcccatcaaagtttggttgacgaaatggtagtatttgtccga aagttcatggatactgcagcaaatttgagttgccacaagtctcctgagagcataggcact agctccctgactgaacttcaacatagagcacaaatacttctgcagaaaggttga

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