KEGG   Corylus avellana (European hazelnut): 132174482
Entry
132174482         CDS       T09426                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03020  RNA polymerase
cave03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132174482
  09124 Replication and repair
   03420 Nucleotide excision repair
    132174482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cave03021]
    132174482
   03400 DNA repair and recombination proteins [BR:cave03400]
    132174482
Transcription machinery [BR:cave03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     132174482
  RNA polymerase III system
   RNA polymerase III
     132174482
  RNA polymerase I system
   RNA polymerase I
     132174482
DNA repair and recombination proteins [BR:cave03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132174482
SSDB
Motif
Pfam: RNA_pol_Rpb6 PTPRCAP
Other DBs
NCBI-GeneID: 132174482
NCBI-ProteinID: XP_059442115
LinkDB
Position
ca3:complement(34307491..34310080)
AA seq 136 aa
MFGCRYEEEPPEPEIEEGAEEDVENNSNEDITGEPVETEEKEEQKPVERRRKTSKYMTKY
ERARILGTRALHISMKAPVMVELEGETHPLEIAMKELRAWKIPFAIRRYLHDGSYEDWGV
DELIVEDSWKRQVGGD
NT seq 411 nt   +upstreamnt  +downstreamnt
atgtttggctgcagatatgaggaagaaccaccagagcctgagattgaagaaggtgccgag
gaagatgtagagaacaatagcaatgaagacattactggagaacccgttgaaactgaggag
aaagaagagcagaaaccggtggaacgtcgtcgtaaaacctcaaaatatatgacaaagtat
gagcgtgccagaatcttgggtacccgcgctctccatatcagcatgaaagcgcctgtgatg
gttgagttggagggtgaaactcacccacttgagattgcaatgaaagagcttcgggcgtgg
aagataccctttgccattcgccgctacctacatgatggaagttacgaagattggggtgtc
gatgaattgattgtagaagactcatggaagaggcaagtggggggtgattga

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