Corylus avellana (European hazelnut): 132175662
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Entry
132175662 CDS
T09426
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave00900
Terpenoid backbone biosynthesis
cave01100
Metabolic pathways
cave01110
Biosynthesis of secondary metabolites
Module
cave_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
132175662
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cave01006
]
132175662
Enzymes [BR:
cave01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
132175662
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
132175662
2.5.1.29 geranylgeranyl diphosphate synthase
132175662
Prenyltransferases [BR:
cave01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
132175662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
132175662
NCBI-ProteinID:
XP_059443659
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All DBs
Position
ca3:complement(37222674..37223982)
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AA seq
317 aa
AA seq
DB search
MLFLDTPNTTAPHLYYNFCSNSHILLLSSMAGALLRLNGSALPRSTARRPCPSLPHRPIA
VTMSQNQSYWASINAEIDAHLKQAIPLRPPLEVFEPMHHLAFAAPQNNAPALCVAACELV
GGRRDQATAAASALHLMYAASFAHEQLPLTDRPRPTTQHAYGPNIELLIPDGMTPFGFEL
LAKSGDPAQNNSGRILRVTIEIARTMGSQGMVDGQYHELDRPQSDDIGWIEHMSKKKEGG
FYACGAACGAILGGGSEEEIEKLRRFGLYVGMIQGMLHGVGRKEKGLAKVVEELRNLALK
ELEEFKGGKVEAIASFV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgctttttcttgacacccccaacacaactgctccacatttgtactacaacttctgctca
aattctcatatcctcctcctcagttcaatggcaggagctcttctccgccttaatggcagt
gctctgccgagatcaactgctcgccggccatgtccatcactccctcacaggcctatagcg
gtcaccatgtcccaaaatcaatcctactgggcctccatcaacgctgaaatcgacgcccat
ctcaagcaggccattcctctacggcctccacttgaagtcttcgagcccatgcaccacctg
gccttcgcagccccacaaaacaacgccccggccttgtgtgttgcggcctgcgagctcgtc
ggcggccgcagggaccaagccacggcagcggcgtcagcactccacctcatgtacgcggct
tccttcgcccacgagcagctcccactaacagacaggcccaggcccacgacccaacacgca
tacggcccaaacatagagcttctaatcccagatggcatgacgccatttgggttcgagttg
ttggctaaatccggcgacccagcccaaaacaattctggccgtattttgcgcgtgacgatt
gagatcgcacgcaccatgggctcgcaaggaatggtggatggacaataccacgaattggac
cgcccccaatctgacgacatcgggtggattgagcacatgtccaaaaaaaaggaaggcggg
ttttacgcgtgcggcgccgcatgtggggcaatactaggagggggaagtgaggaggaaata
gagaagctaaggaggtttgggctctatgtggggatgatacaaggaatgttacatggggtt
ggaagaaaagagaagggtttagcaaaagtggtggaagagctaagaaatttggcactcaag
gagttggaggaattcaagggaggaaaggttgaggcaattgctagctttgtgtaa
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