KEGG   Corylus avellana (European hazelnut): 132187717
Entry
132187717         CDS       T09426                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03020  RNA polymerase
cave03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    132187717
  09124 Replication and repair
   03420 Nucleotide excision repair
    132187717
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cave03021]
    132187717
   03400 DNA repair and recombination proteins [BR:cave03400]
    132187717
Transcription machinery [BR:cave03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     132187717
  RNA polymerase III system
   RNA polymerase III
     132187717
  RNA polymerase I system
   RNA polymerase I
     132187717
DNA repair and recombination proteins [BR:cave03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      132187717
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat
Other DBs
NCBI-GeneID: 132187717
NCBI-ProteinID: XP_059458109
LinkDB
Position
ca7:complement(24976558..24981965)
AA seq 206 aa
MTLSDEEINRLFRIRRTVMQMLKDRGYFVGDFEIDMTKEQFRNKYGESMKREDLVINKAK
RNDSSDQIYVFFPEEPKVGVKTMKTYSQRMKSENVFRAILVVQHNLTPFARSSINEISTK
FQLEVFQEAELLINIKEHVLVPEHQVLTIEEKKTLLERYTVKETQLPRIQVTDPVARYYG
LKRGQVVKIIRPSETAGRYVTYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atgacgctgtcggacgaggaaatcaataggcttttcaggattcgaagaacagtgatgcaa
atgctgaaggaccggggatattttgttggggactttgagattgacatgaccaaagagcag
ttcaggaataagtacggtgagagcatgaaaagggaagaccttgttatcaataaagccaag
cgaaacgatagctctgatcagatctatgttttctttcctgaggaaccaaaggttggtgtt
aagacaatgaagacttactcccaacgaatgaagtcagagaatgttttcagagcaatcttg
gtcgttcagcataatttaactccttttgctcggagctccataaatgagatttctacaaaa
ttccaattggaggttttccaggaggcagaattgttgataaacattaaagagcatgttctt
gtccctgagcatcaggtacttacaattgaggagaagaaaactttgctggaaaggtacacc
gtgaaagaaactcagctgcctcgtattcaagtgactgatccagtcgcgagatattatggg
ctgaagcgtggacaagtcgtgaagataatccggccaagcgagactgcaggccgatatgtc
acttaccgttatgttgtataa

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