Chitinophaga caeni: COR50_20720
Help
Entry
COR50_20720 CDS
T05360
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
cbae
Chitinophaga caeni
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
COR50_20720 (ltrA)
Enzymes [BR:
cbae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
COR50_20720 (ltrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
GIIM
Motif
Other DBs
NCBI-ProteinID:
ATL49976
UniProt:
A0A291R176
LinkDB
All DBs
Position
complement(4949437..4950690)
Genome browser
AA seq
417 aa
AA seq
DB search
MDQIVDPLNLSKAYQRVRSNGGSAGVDGMEVEALRCWLGTHLTELQDQLLPGTYEPRAVR
GVEIPKPHGGKRLLGIPTVKDRLVQQAVHQVLSARYERIFSANSYGFRANKSAHQALKAA
GIFIASGKGYVIDLDLEKFFDEVNHHRLMWLLKTRIGDNRVLQLIHRYLKAGMMHGGLTG
QRIKGTPQGSPLSPILSNIVLDELDKELERRGHSYVRYADDVKIFVSSERRAKEVKESIT
GYIMDMLKLKVNGSKSRICRGAKLNFLGHSIFNDGTPGLSRASERRLKDRLRKLTRRNKG
VSLDRIIGQLRTKLQGWLNYFRYARMKSKMESVDGWLRRKLKCFRLKQCKRRIGIVRWLR
KLGVEETLSWRVALSGKGWWRLSNSPALNMGMDKLWFAQQGYYSLSENYKSLHRKLL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatcagattgtggacccattaaatttaagtaaggcgtaccaaagggtgcggagcaat
ggaggaagtgcgggtgtagatgggatggaagtagaagcgttgcgatgctggctgggaacg
catctcaccgagttgcaagatcagctattgccaggcacgtacgaaccccgggctgtgcga
ggagttgagatacccaaaccccatgggggcaagcggttgttgggcatacccacggtgaaa
gaccgcctggtgcagcaagcggtgcaccaggtattaagtgcaaggtatgaaagaatattt
tctgcgaacagttatgggttccgtgccaacaagagtgcgcatcaggcactgaaggcggcg
ggaatcttcattgcatcggggaaggggtatgtaatagacctcgacctggagaagttcttt
gatgaagtgaatcatcaccggttgatgtggttgttgaaaacgcggatcggtgacaacagg
gtacttcaactaatacaccggtatctgaaagcaggaatgatgcatggtggtttgaccggg
caacgcatcaaaggcacaccgcaaggcagcccgctaagtccgatattgtccaacatcgta
ttagacgaactggataaagagctggaaagaagagggcatagctacgtaaggtatgctgac
gatgtgaaaatttttgttagcagtgaacgaagagccaaagaggtgaaagagagtatcact
gggtatatcatggatatgctcaagctcaaggtgaacgggagtaagagccggatctgccgg
ggggctaaattaaacttcctgggtcacagtatcttcaatgacggaaccccgggccttagt
agagcgagcgaaagaaggctaaaggacagattgcgcaagctaacaaggcgtaataaaggc
gtgagtctggatcggatcattggtcaactgcgaacaaaattacagggctggctgaactat
tttcgctacgcccgcatgaagagcaagatggaatcggtggatggttggctaaggcgcaag
cttaaatgcttcagactgaagcagtgcaagcgtaggataggcattgtccgctggcttcgg
aaacttggggttgaagaaacccttagctggcgagttgcactaagcggtaaagggtggtgg
aggctaagcaacagccccgctctgaacatgggtatggataagttgtggttcgcgcaacaa
ggctattacagcctgagcgagaactacaaatccttacatcgtaaactactttaa
DBGET
integrated database retrieval system
