Petrocella atlantisensis: PATL70BA_0424
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Entry
PATL70BA_0424 CDS
T05737
Symbol
polC
Name
(GenBank) DNA polymerase III (alpha subunit)
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cbar
Petrocella atlantisensis
Pathway
cbar03030
DNA replication
cbar03430
Mismatch repair
cbar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PATL70BA_0424 (polC)
03430 Mismatch repair
PATL70BA_0424 (polC)
03440 Homologous recombination
PATL70BA_0424 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbar03032
]
PATL70BA_0424 (polC)
03400 DNA repair and recombination proteins [BR:
cbar03400
]
PATL70BA_0424 (polC)
Enzymes [BR:
cbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PATL70BA_0424 (polC)
DNA replication proteins [BR:
cbar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PATL70BA_0424 (polC)
DNA repair and recombination proteins [BR:
cbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PATL70BA_0424 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NI
DNA_pol3_a_NII
tRNA_anti-codon
HHH_3
RNase_H_2
DUF655
DEDDh_C
HHH_5
Motif
Other DBs
NCBI-ProteinID:
VDN46277
UniProt:
A0A3P7PP65
LinkDB
All DBs
Position
1:complement(414827..419215)
Genome browser
AA seq
1462 aa
AA seq
DB search
MSKKLDEVFRGIPLTGQLNRVFDDAIVENVYFNKEQNKLYIQMLLKQVIHPQIIQLLRDK
IMEFLDEEGLFVRIEERYAGNHGLDIKELYTYYQPSLMYLIKEESPFVAAKLGLLEPQWE
AEQLTYALEEFDYDYMKQYTIDEFIQLTFKMKFDVDLKVAFIKKEKHHSVFEEFVENRKR
EEKKLIKDMMISGNNASQSAVKEVKAPEMPKGKGKPLPENLVIGRKGISGIITKIKDLNG
DYDSIIIEGYVLSQEIRITKTGKVLLIMDITDFTDSITCKAFLKKEEFDNRIAAMLSKNM
FVRLEGRVAFDTFSNELGIMISTMEKIEDFRLKKMDNSETKRVELHVHTQMSDMDGMTSA
KALIKRAKEWGHKAMAITDHGVVQAFPEAFHAIDASDDFKILYGVEAYLVDDLKDIIRHP
RGQNLNSEYVVFDIETTGFYAGKDKITEIGAVKIKEGKIVERYGTFINPQRSIPIKVQQL
TGIDITMVKDAPTIQEELKNFLAFCGDSILVAHNADFDLGFIECFAKELGIEVKNTTLDT
LELARIFLPDLHNHKLQTIAKHYNVPLINAHRAVDDAEATAHILLKMFEHMNQINIHTIE
GILTYANQSSRDVKRLRAAHAIILVKNLVGLRNLYELISKSHLDYFFRQPKIPKSVFNEL
REGLIIGTACEAGELYKAVLEDKPKEEIDRLCDFYDYFEIQPLANNEFLIRNEAVDDWDA
LREINKKIVNLGEEHQKMVVATCDVHFIDPEDEVYRRILMAGKGFGDANQQAPLYFRTTE
EMLEEFAYLGRDKAYEVVVTNTNKIMESIEKIDPVPPDKYPPVIEGSDETLTNICHEKAM
SIYGKELPPQVKERLDRELNSIITNGFAVMYIIAQKLVWKSMEDGYLVGSRGSVGSSFAA
TMAGITEVNPLPAHYICPNCHYTDFESDVIKAHSGNSGCDLPDAHCPNCDTLLIKEGHDI
PFETFLGFYGDKEPDIDLNFSGEYQAIAHQYTEELFGVGHVFRAGTIGTLAEKTAFGFVK
KYFDEHHQSARTAEINRLVQGCTGVRRTTGQHPGGIIVVPKDQSIYKFTPVQHPANDQST
SIITTHFDYHSIDHNLLKLDILGHDDPTMIRMMEDLTGIDATTIPLDEPKVMSLFLGLDA
LGITADQIGGTNLGCLGVPEFGTEFVIQMLQDTKPKSFSDLCRISGLSHGENVWLNNAQE
LIRDKKANIKEIISTRDDIMTYLIHMGVDKGLSFKIMESVRKGKGLVPEMETAMKEANVP
EWYIWSCKQIRYMFPKAHAVAYVMMAYRIAYYKVYHKEAYYATYFSIRATDFDYGTMCHG
KHHLEQHMQLLKAKESRAKSRELDPDEGGIQKFTKKEKDTIKDMKIVQEMYARGIEFLPL
DLYTVDAKKFQIIDGKIMPALSALQGLGEKAAENIVLEREKGPFISIEDLRVRTKISKTV
IEIMKDNGILDGMQESNQLSLF
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaaaattagatgaagtatttcgaggtatcccattaaccggtcagttgaaccgg
gtttttgatgatgccattgtagagaatgtatatttcaataaagaacagaacaaactctat
atacagatgttgctaaagcaggtcattcatcctcagattatccagttattaagagataaa
atcatggaattcttagatgaagagggcctatttgtgcgtattgaggaacgttacgcaggc
aaccatggcttagacataaaagagctgtatacttattatcaacccagtctcatgtacctt
attaaagaggaaagcccatttgtagcagccaagttaggtctattagaaccacagtgggaa
gccgaacaactgacctacgctttggaagaatttgattatgattatatgaaacaatatacc
atcgatgaattcattcaattgacctttaagatgaaattcgatgtagatctcaaagttgct
tttataaaaaaagaaaaacaccatagcgtttttgaagagtttgtagagaaccgaaaaaga
gaagagaagaaactcatcaaagacatgatgatatccggtaacaacgcatctcaatcagct
gtaaaagaagtcaaagcacctgaaatgccaaaaggaaaaggcaagcccctacccgagaac
ctagtcatcgggcgtaaaggcatcagtggcatcatcaccaagatcaaagacttaaacggt
gactatgatagcattattatagaaggttatgtcttaagtcaggagatccgaatcacaaaa
acaggtaaagtcttgctgattatggacattacggactttacggattccatcacctgtaag
gcctttttgaaaaaagaagaatttgacaatcgcattgccgcaatgctgtctaagaatatg
tttgtacgactagaaggccgtgtcgcctttgatacattttctaacgaactgggtattatg
attagcaccatggaaaaaattgaagacttcaggcttaagaagatggacaattcagaaacg
aaaagggtcgagttacatgtgcatacgcagatgagtgatatggacgggatgaccagtgcc
aaagcccttataaaaagagccaaagaatggggccacaaagctatggccattacggaccat
ggcgtagttcaagcgtttcccgaagcttttcatgccattgatgcatccgatgactttaag
attctttatggtgttgaagcttatttggtggacgatctaaaagacatcataagacacccg
agagggcagaatctaaacagtgaatatgtggtctttgatattgagacaacgggcttttat
gccggcaaggacaagattactgagattggtgccgttaagatcaaagaaggcaagattgta
gaacgttatggcacctttatcaatccacagcggagcatacccataaaagtacaacaactc
accggcatcgatataaccatggtcaaagatgccccaaccatccaggaggaactgaagaac
tttctggcattttgtggagacagtattttggtggcgcataacgccgattttgacttaggt
ttcatcgagtgttttgctaaagaactaggcattgaagtaaaaaacacgacccttgatact
ttagagctggcccggatatttttaccggatttgcacaaccataagcttcaaaccatagca
aaacactataatgtaccccttattaacgcccaccgtgctgtggacgatgcagaggcaacc
gctcatatactgcttaagatgtttgaacatatgaatcagatcaacatccataccattgaa
ggcatcttaacctatgccaatcaatctagcagagatgtaaaaagacttcgagcggcccat
gccatcatactggttaagaaccttgtgggtttaaggaacctttatgaattgatatcaaaa
tcccatctggattattttttcagacaacctaagatacccaaaagtgtttttaacgaatta
agagaaggactaataatcggtacggcctgcgaagccggagaactttacaaagcggtacta
gaagataagcccaaagaagaaatagatcgactatgtgatttttacgattattttgagatt
caacccttagccaataatgaatttctaatccgaaacgaagccgtcgatgattgggatgcc
ctaagagagattaataaaaagattgtcaaccttggagaagaacatcagaaaatggtggtc
gcaacctgtgatgtccattttatcgatcctgaagatgaggtctacaggcgtattctaatg
gcgggtaaaggctttggagatgcaaatcagcaagcgcctctttattttagaacaacagaa
gagatgctagaagagtttgcctatctaggtcgtgacaaagcctatgaagtggtagtaacc
aataccaataaaatcatggaaagtattgaaaagatagatccagtaccaccggacaagtac
ccgccggttatagaaggttctgatgagacgttgaccaacatatgtcacgaaaaggccatg
tccatttatggaaaagaattaccaccccaagttaaagaaagactagacagagagctcaac
tccatcattaccaatgggtttgcggtgatgtatatcatcgcccaaaaactggtatggaaa
tcaatggaagacggctacctcgttggttcaagaggttcggtaggatcctcttttgcagcc
accatggctggcattacagaggttaatccactaccggctcattatatatgcccaaattgc
cattataccgattttgagtctgatgtcatcaaggcgcattccggaaactctggttgtgac
ttgccggatgcccattgtcccaattgtgacactctgctcatcaaagaaggtcacgatata
ccttttgagacttttttaggtttctatggtgataaagaaccggatattgacttgaatttt
tccggtgaatatcaagccatagcccatcaatatacagaggaacttttcggtgtcggtcat
gtatttagggcaggcaccataggaacactggctgaaaaaactgcttttggttttgtgaag
aaatactttgatgagcatcatcaaagtgccagaaccgcagaaatcaatcgactggtacaa
ggttgtacaggtgttagaagaaccacaggacaacatccgggtggtattattgttgtgcca
aaagatcagtccatatataaattcacgccggttcagcacccggccaacgatcaaagcact
tccatcatcacgacccactttgattatcattccattgaccataatttattgaagctggat
atacttggacatgatgatccaaccatgattcgtatgatggaggatttgacagggattgat
gcaacgacgataccccttgatgaaccaaaagtcatgtccctatttttaggattggacgct
ctaggcataacagcggaccagatcggcggaaccaatctagggtgtcttggggtacctgag
tttggaacagaattcgtgatccagatgctacaagatacgaagccaaaaagcttttcggat
ttgtgcagaatatccggtctttcccatggtgagaatgtatggcttaacaatgcccaagaa
ttaatcagagacaaaaaagccaacatcaaagaaatcatatccacacgtgacgacatcatg
acctatcttattcatatgggtgttgataagggcctctccttcaaaattatggaaagtgtt
agaaagggaaaaggcttggtacctgaaatggaaaccgctatgaaagaggcaaatgtacct
gaatggtacatctggtcctgtaaacaaatccgctacatgtttccgaaggcgcatgccgtg
gcttatgttatgatggcttaccgtattgcttattacaaggtctatcataaggaagcttat
tatgcgacgtattttagcatcagagcgacagattttgattatggtaccatgtgccatggt
aagcatcatctagaacaacatatgcaacttctaaaagccaaagaatcacgggcgaaaagc
cgagagctggacccggatgaaggtggtatacagaagttcaccaaaaaagaaaaagatacg
attaaggacatgaaaatcgttcaggaaatgtatgccagaggcatagagtttctaccatta
gatctatacacagtggatgctaagaagtttcagatcattgatgggaagattatgccggcc
ctcagtgccctacaaggtctaggagagaaggcagcagaaaacatcgtcctagagcgggag
aaaggtccctttatatccatagaagacctaagggttcgaaccaagatcagtaagaccgtc
attgagattatgaaagacaatggtatcttagatggtatgcaagaatccaatcaactaagt
ctgttttaa
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integrated database retrieval system
