Clostridium botulinum B1 Okra: CLD_2143
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Entry
CLD_2143 CDS
T00671
Symbol
rsmD
Name
(GenBank) RNA methyltransferase, RsmD family
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
cbb
Clostridium botulinum B1 Okra
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbb03009
]
CLD_2143 (rsmD)
Enzymes [BR:
cbb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
CLD_2143 (rsmD)
Ribosome biogenesis [BR:
cbb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CLD_2143 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
Met_10
MTS
MethyltransfD12
Methyltransf_31
N6_N4_Mtase
Methyltransf_15
RsmJ
Methyltransf_25
TRM
Methyltransf_16
SAM_MT
N6-adenineMlase
Methyltrans_SAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
ACA46430
UniProt:
B1IIK5
LinkDB
All DBs
Position
complement(2618223..2618780)
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AA seq
185 aa
AA seq
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MRIISGSARGRKILSPQSSVTRPTLDRIKESIFNIIQNQVYGSGVLDVFAGTGSLGLEAA
SRGAKFSYLVDKSPETYPLLRENIKNLKFEDLCKSFNMDAYSALEEFARKSIVFDLIFID
PPYAKEMIPPAMESIDKKELLNKEGLIVTKIDSSEEIYEGTERIKLFDHRKYGNTTVCFY
KFKED
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgagaattatctctggatctgctagaggcagaaaaatattatcaccccaaagtagcgtt
acaagaccaactttggatagaataaaagaatctatatttaatataatacaaaatcaggta
tatggatctggagttttggatgtttttgcaggaacaggcagtttgggattggaggcagct
agtaggggagcaaagttttcttatttagtagataaaagtcctgaaacttatcctttatta
agagaaaatattaagaatttaaagtttgaagatctttgcaagagttttaatatggatgct
tatagtgcattagaagaatttgctaggaaatctatagtttttgatttaatatttatagat
cctccatatgcaaaggaaatgattcctccagctatggaaagcatagataaaaaagagcta
ttaaataaagaggggttaatagtgacaaagatagattcttcagaagaaatatatgaagga
actgaaagaataaaattatttgatcatagaaaatatggaaacactaccgtttgtttttat
aaatttaaggaggattaa
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