Clostridium beijerinckii NCIMB 14988: LF65_03112
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Entry
LF65_03112 CDS
T04773
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
cbei
Clostridium beijerinckii NCIMB 14988
Pathway
cbei00190
Oxidative phosphorylation
cbei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbei00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LF65_03112
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LF65_03112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbei03019
]
LF65_03112
Enzymes [BR:
cbei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LF65_03112
Messenger RNA biogenesis [BR:
cbei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LF65_03112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
AJG99678
UniProt:
A0A0B5QS71
LinkDB
All DBs
Position
complement(3428412..3430469)
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AA seq
685 aa
AA seq
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MDENYTYDNYENFFNRELSWLEFNQRVLDEAKDNTNPLLERLKFLSISSSNLDEFFMVRI
GSLYSQIQAGFDEREVSGLTPSEQISKILYRVREMVKDQYHTYEHLYDHLGSRNIRIFTY
DMLNEEQLEFINDYYKNILYPVLTPMVIDSGRPFPLLLNKTLNIGVILKESKSEQELFAT
IQVPSVLGRLVPIPGGIGENFVLLEDVIKNHLKELFGFKVLTTACYRITKNADLSLNEEG
AEDLLETIEESLKQRRWGLAVRLEIEETNDTRIINKLEQEFEISEDQIFCIKGPIDLTFI
NKLYSIKGYSELKFEQIKSLQVKELQEEDIFQEISKKDIFLHHPYESFSLVVKLVETAAQ
DEKVLAIKQTLYRVSGNSPIIAALSKAAENGKQVTVLVELKARFDEENNIHWARQLEKAG
CHVIYGVIGLKTHSKILLIVRKEKKGIKRYVHLGTGNYNDVTAKFYTDIGIITSKPEYGE
DASVIFNMLSGYFKPENMSKITIAPYGLRKKLEHLVERETEHAKNGKKAKIIAKMNSLVD
RKLMIALYKASQAGVKVELIVRGICSLRPGVKGLSDNITVRSIVGRYLEHSRIYYFYNNG
KEDTYISSADWMYRNLDKRVETMTVIEDNLIKKELKEMLELYIKDNVKSRILLEDGSYTK
IKSEGKIVNAQKDMIEICKKFNQKS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaattatacatatgataattacgaaaatttttttaatcgtgaacttagttgg
ttggaatttaatcaacgagttttagatgaagctaaggataatacgaaccccttattggaa
cgattaaaatttttatccatatcaagttccaatctcgatgaattttttatggtgagaatt
ggatcattatatagtcaaattcaagcaggatttgatgaaagagaagtttctggattaaca
ccaagtgaacaaattagtaaaatactttatagagttagggagatggttaaggaccaatat
catacatatgagcatttatatgaccacttaggttctagaaatataagaattttcacgtat
gatatgttaaatgaagagcaattagaatttataaatgactattataaaaatatattatat
ccagttttaacacccatggtaattgattcaggcagaccatttcctttgttgttaaataaa
acattaaatataggggttatattaaaagaaagcaagagtgaacaagaactatttgctaca
attcaagtaccatcagttttaggaagactagttcctataccaggggggataggtgaaaac
tttgtattattggaagatgtcataaaaaaccacctaaaggaattgtttggatttaaagta
ttaacaacagcgtgctatagaataactaaaaatgcagatttaagtttaaatgaagaaggc
gcagaagatttgcttgaaacaatagaagaatctcttaagcagagaaggtgggggcttgcc
gtaagattagaaattgaagaaacaaatgacaccaggattataaataaattagaacaagaa
tttgaaatttcggaggatcaaatattttgtataaaagggccaattgatttaacatttata
aataaattatatagtattaagggatatagtgaacttaagtttgagcaaataaagagtctg
caagttaaggaattacaagaagaggatatatttcaagaaataagcaagaaggatattttt
ctacaccacccatatgaaagtttttcattagtagtaaaattagtagaaactgctgctcag
gacgaaaaagtactagctataaagcaaaccctatacagagtaagtgggaattcacctata
atagctgcgctttcaaaagcagcagaaaacggaaagcaggtaacagtattagttgaactt
aaagctaggtttgacgaagaaaataacattcattgggcaaggcagcttgaaaaagcggga
tgtcatgttatatatggtgtgattggattaaaaactcatagtaaaatattattgattgtt
agaaaagaaaaaaaaggtattaaaagatatgttcatttaggaactggaaattataatgat
gtaacagctaaattctatacagatattgggataataacatcaaagcctgaatatggagaa
gatgcatcagttatatttaatatgctttcaggatattttaaacctgaaaatatgagtaaa
ataactattgcaccgtacggattacgaaaaaagttggagcatctagttgaaagagaaact
gagcatgctaaaaatggaaagaaagcaaaaataattgcaaaaatgaattcgttagttgat
agaaaacttatgatagccttatataaggcatcacaagctggagttaaagtagaacttata
gttagaggaatttgctcattaagacctggagttaaaggcttaagtgataatataacagtg
agaagcattgtaggaagatatttggaacacagcagaatatattatttttataataatgga
aaagaagacacatatatatcaagtgctgactggatgtataggaatttagacaaaagagtt
gaaactatgacagtaatagaagataatcttataaaaaaggaacttaaagaaatgcttgaa
ttatatataaaggataatgttaaaagtaggatattgctagaagatggttcttatacaaaa
attaaaagtgaaggtaaaatagttaatgcacagaaggatatgatagagatttgtaaaaag
tttaatcagaaaagttag
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