Cognaticolwellia beringensis: B5D82_01000
Help
Entry
B5D82_01000 CDS
T05628
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
cber
Cognaticolwellia beringensis
Pathway
cber00730
Thiamine metabolism
cber01100
Metabolic pathways
cber01240
Biosynthesis of cofactors
cber04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
B5D82_01000
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
B5D82_01000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cber03016
]
B5D82_01000
Enzymes [BR:
cber01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
B5D82_01000
Transfer RNA biogenesis [BR:
cber03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
B5D82_01000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
tRNA_Me_trans
ADH_N_2
Motif
Other DBs
NCBI-ProteinID:
ASP46474
UniProt:
A0A222G526
LinkDB
All DBs
Position
240822..242276
Genome browser
AA seq
484 aa
AA seq
DB search
MKFIVKLQAEITIKSRPVRKRFTKILESSVKNVLRRVDDQVTTRMNWDNIEVNTANNTPE
NRLKLIETLKSIPGIPMFLEVQQTDFTDLHDIYEKTLAVHAKNIENKTFCVRVKRTGKHD
FNSIKVEQYVGGGLNQQVESARVKLTKPDVTVYLEIKNENLFIVTERHKGMGGFPIATQE
DVLSLMSGGFDSGVASYQMIKKGARTHYCFFNLGGDAHEVGVKQVSYYLWDKFGASHRVK
FFAVDFEPVVAEILENIENGLMGVVLKRMMMRAAEKIAAKMGIQALVTGEAVGQVSSQTL
TNLNVIDRVTETLILRPLVAYDKQDIIDIARQIGTEDFAKTIPEYCGVISKKPTVKAVLS
KVEAEEANFDFAILDKVIAETRIFDIRDIGKESEAEIHAVDTLDNIPANAVVLDIRSPEE
EDDNPLDLEGVEVVHLPFYKLTTQFGDLDKSKDYLLYCDQGVMSKLQALYLLGAGFTNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgttaagttacaggctgaaattacgattaaaagccgtccggtgcgtaag
cgttttactaagattttagaatcgagtgtgaaaaatgttttacgtcgagttgatgatcaa
gtcacaacacgcatgaactgggacaatattgaagtaaatacagccaacaacacgccagaa
aaccgtttgaaattgatcgaaacattaaagtcaattccaggtattccgatgtttcttgaa
gtgcaacaaacagattttaccgacttgcacgatatttatgaaaaaactttagctgtgcat
gctaaaaacattgagaataaaaccttttgtgttcgagtaaaacgtaccggtaagcacgat
tttaactctataaaagtggaacaatatgtgggtggtggcttaaatcagcaggttgagtct
gctcgagttaaattaaccaaacccgatgttacggtttatttagaaattaaaaatgaaaat
ttatttatagtcactgaacgccataaagggatgggcggtttcccaattgccacacaagaa
gatgttttatcgcttatgtctggtggttttgattcaggcgttgctagttatcaaatgata
aaaaaaggggctcgtacccattattgcttttttaacttgggtggtgacgcgcacgaagtt
ggtgttaagcaggttagctattatttatgggataagtttggtgcttctcatcgagtgaag
ttttttgctgtagattttgaacctgtcgtagctgaaatcttagaaaacattgaaaatggc
ctcatgggcgttgtgcttaaacgtatgatgatgcgagcggctgaaaaaatagctgcaaaa
atgggtattcaagcgctagtcactggcgaagcagtagggcaagtatctagtcagacatta
actaacttgaatgtaattgaccgtgttaccgaaaccttgattctacgaccattagttgca
tacgataaacaagatattattgatatagcacgccaaattgggactgaagattttgctaaa
actatcccagaatactgtggtgttatttctaaaaaaccgacagtaaaagcggtattgtca
aaagttgaggcagaagaagctaattttgattttgcaattctcgataaagtcattgctgag
actcgtatatttgatattcgtgacattggcaaagaaagtgaagccgagattcatgctgtt
gataccttggataatattcctgctaatgcggtagtactcgacattcgtagccctgaagaa
gaagatgataatccattagaccttgaaggggtagaagtggtgcacttacctttttacaag
ctaacgactcagtttggcgacttagataagtctaaagattacttactttattgcgaccaa
ggtgtcatgagtaaacttcaggcactgtatttattaggtgcaggctttaccaatgttaaa
gtgtatcgcccttaa
DBGET
integrated database retrieval system
