Cognaticolwellia beringensis: B5D82_07800
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Entry
B5D82_07800 CDS
T05628
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cber
Cognaticolwellia beringensis
Pathway
cber03030
DNA replication
cber03410
Base excision repair
cber03420
Nucleotide excision repair
cber03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B5D82_07800
03410 Base excision repair
B5D82_07800
03420 Nucleotide excision repair
B5D82_07800
03440 Homologous recombination
B5D82_07800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cber03032
]
B5D82_07800
03400 DNA repair and recombination proteins [BR:
cber03400
]
B5D82_07800
Enzymes [BR:
cber01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B5D82_07800
DNA replication proteins [BR:
cber03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B5D82_07800
DNA repair and recombination proteins [BR:
cber03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
B5D82_07800
NER (nucleotide excision repair)
GGR (global genome repair) factors
B5D82_07800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Paxillin
Motif
Other DBs
NCBI-ProteinID:
ASP49943
UniProt:
A0A222GE56
LinkDB
All DBs
Position
complement(1832801..1835545)
Genome browser
AA seq
914 aa
AA seq
DB search
MPTSDQSPLILVDGSSYLFRAYHVPYLQALSTSDGQPTGAITGVLNMIRSLKKDYPNGNI
IAIFDAKGKTFRNDMYPEYKANRPPMPDDLRTQIAPIHEIITAMGLPLLVIDGVEADDVI
GTLSHQATALGIETVISTGDKDMAQLVNPHVRLINTMTNVEMDEAGVIEKFGVRPDQIID
YLALMGDKVDNIPGVDKCGPKTAVKWLTAYPTLKEVMQHADEVKGKVGENLRTALAHLPL
SYELATIKLDVALEQNAAELKPSAPDTEKLRTLYQKYELKRLLADLDAVDKKPDSLVTEN
NDEVADLPAAVDSEYGIILDKTSFNVWLEKLKAAELFAFDTETTSVDYMKAKLVGLSFCI
EVGKAAYVPLAHDYIDAPEQLELSWVLEQLKPLLESDTLFKVGQNLKYDANVLSHYDIAM
QGIAFDTMLESYCLNSVATRHNMDALADKYLGYKTVHFEDIAGKGAKQLTFNQIEIEKAG
HYAAEDADITLRLHEAIYPQLSKISAQLSVFADIEMPLLPVLARMEQHGVLIDCDMLAEQ
SQSIGARLAELEIEAHNLAGKSFNLSSPKQLQVILFEELKIPVIKKTPKGAPSTAEEVLQ
ELALDYPLPKVILENRGLSKLKSTYTDKLPLLVGAKTNRVHTSYHQAVTATGRLSSTDPN
LQNIPIRSEEGRKIRLAFIAPPEHKIVAIDYSQIELRIMAHLSDDPGLVKAFSEGKDVHK
ATAAEIFAVPLDEVTSDQRRSAKAVNFGLIYGMSAFGLAKQLNVPRHTAQAYMDKYFERY
PNVSQYMEDTRQQATEKGYVETLFGRRLYLPDIKAKNAMRKKAAERAAINAPMQGTAADI
IKKAMLAVDDWIQAQNDPRIKMTMQVHDELIFEIHQDIVEATTATLVEIMNNAITMSVPL
IAEAGIGDNWEQAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgccaacttctgaccaatcaccgcttattttagtcgatggttcatcttatttattccgc
gcatatcacgtgccatatttacaagcattatcaacttcagacggtcaacctacaggtgcc
attacaggtgtcttgaacatgatcagaagcctgaaaaaagactatcctaatggtaatatt
attgcgatatttgatgccaaaggaaaaacctttcgtaatgacatgtatcccgaatataaa
gctaaccgtccgccaatgccggatgatttacgcacgcaaattgcgccaatacatgaaatt
atcactgccatgggtttaccacttttagtgattgatggtgttgaggcggacgatgttatt
ggtacgttatcgcatcaagcaacagcgctgggtattgagacggtgatctctaccggtgat
aaagatatggcacagttagttaacccgcatgtgcgcttaattaacaccatgaccaatgta
gaaatggatgaagctggcgtcattgaaaagtttggcgttcgcccagatcagatcatcgac
tatcttgccttaatgggcgataaagttgacaacattccgggtgttgataaatgtggtccg
aaaaccgccgtaaaatggttaaccgcttatccgactttaaaagaagtaatgcaacatgcc
gatgaagttaaaggtaaagtaggtgagaacctgcgtactgctttagcccacttaccactt
tcttatgaactagccacgattaagcttgatgttgcacttgagcaaaacgctgctgaatta
aaaccaagcgcacctgatacagaaaaattaagaaccttgtatcaaaaatacgaacttaag
cgtttattagcagatctagatgccgtcgataaaaaacctgattcgttagttacagagaat
aacgatgaagttgcagacttgccggctgctgttgatagtgaatatggcattattttggat
aaaaccagctttaatgtttggcttgaaaagttaaaagcggctgagctatttgctttcgat
actgaaaccaccagtgtcgactatatgaaggctaagctagtgggcttatcattttgtatt
gaggtcggtaaagcggcttatgtaccattagcacatgattatatcgatgcacctgaacag
ttagaacttagctgggtgcttgagcaacttaaacccctattagaaagtgatactttattt
aaagtagggcaaaatttaaaatacgatgccaatgtgttatcgcattatgatattgctatg
caaggcattgcttttgataccatgctagagtcgtattgtttaaatagtgtagctactcgc
cataatatggatgcgctagcggataagtatttaggctataaaacggtacattttgaagat
atagcaggcaagggcgctaaacaactcacttttaatcaaattgagattgaaaaagccggc
cattatgccgctgaagatgccgatattactctgcgcttgcatgaagccatttatccacaa
ttatcaaaaataagtgcgcagctatcggtttttgctgatattgaaatgcctttattacca
gtacttgctcgtatggagcagcatggcgtgttaattgattgcgatatgctggctgaacaa
agccagtcaattggtgcgcgtttagcagagttagaaattgaagcgcataatctggcaggt
aaaagctttaatttaagttcacctaagcagttacaagtcattttgtttgaagagttaaaa
attcctgttattaagaaaacgcctaaaggtgcgccttcaacagctgaagaagtgctgcaa
gaattagccttagattatccattaccgaaagttattttagaaaaccgaggtttaagtaaa
ttaaagtctacttacactgataagctaccgctcttagttggcgctaaaacgaatcgtgtt
catacttcgtatcatcaagcggttactgcaacaggacggttatcttcaaccgatccaaat
ctacaaaacattccaattcgtagtgaagaaggacgtaaaatccgtcttgcttttatcgct
ccacctgagcataaaattgtcgcgatagattattctcaaattgaattacgcattatggcg
catttgtctgacgatccaggcttagttaaagcattttctgagggtaaagatgtacataaa
gcgacagccgctgagatattcgctgtgccacttgacgaagttactagcgaccaacgccgc
agcgcgaaagcagttaactttggtttaatttatggtatgtcggcatttggcttagcaaaa
caattaaacgttcctcgccatacggcgcaagcttatatggataaatactttgagcgttat
ccaaatgtttctcaatatatggaagatacgcgtcagcaagcaacagaaaaaggttatgta
gaaaccttatttggccgccgactttatttaccggatattaaagctaaaaatgccatgcgt
aaaaaggcagcagaacgagctgccattaatgcgccaatgcaaggcactgctgctgatatc
attaaaaaagccatgttggctgtagacgactggatacaagcgcagaacgatcctagaatt
aaaatgaccatgcaagtgcacgatgaattaatatttgaaatccatcaagacattgttgaa
gcaaccacagcgactttggttgagataatgaacaatgctattaccatgagtgtgccacta
attgcagaggcgggcataggagataactgggaacaagcgcattag
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