Cognaticolwellia beringensis: B5D82_08530
Help
Entry
B5D82_08530 CDS
T05628
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
cber
Cognaticolwellia beringensis
Pathway
cber00860
Porphyrin metabolism
cber01100
Metabolic pathways
cber01110
Biosynthesis of secondary metabolites
cber01120
Microbial metabolism in diverse environments
cber01240
Biosynthesis of cofactors
Module
cber_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
cber_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
B5D82_08530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cber04147
]
B5D82_08530
Enzymes [BR:
cber01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
B5D82_08530
Exosome [BR:
cber04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
B5D82_08530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
ASP47794
UniProt:
A0A222G8X0
LinkDB
All DBs
Position
2020057..2021073
Genome browser
AA seq
338 aa
AA seq
DB search
MNNVFGQYPARRMRRMRSDDFSRRLMSEHQLTVNDLIYPVFVLEGENQCEAIESMPGVER
KSIDLLLEECQELVELGVPAIAIFPVTPTDKKSLLAEEAYNIDGLAQRAVRAVKAKFPSL
GVITDVALDPFTTHGQDGIIDDTGYVLNDVTKDILVKQALSHAQAGADIVAPSDMMDGRI
GAIRKELEHHHFVNTKILAYSAKYASSYYGPFRDAVGSAGNIKGGNKFSYQMDPANSNEA
LHEVAQDIQEGADMVMIKPGMPYLDVVRRVKDTFQVPTYAYQVSGEYAMHMAAIQNGWLA
EKPCVMEGLLAFKRAGADGILTYFAKQVARWLKEEQNA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgtctttggacaatacccagcacgccgcatgcgtcgtatgcgttctgatgac
ttttcacgacgtttaatgtcagaacatcaactgacggttaatgacctaatttatccggtt
tttgttttagagggtgaaaaccagtgcgaagctattgagtctatgcccggagtagagcgc
aaaagtatcgatttgttattagaagaatgtcaggagttggttgaattaggcgtacctgca
attgccatttttcctgttacaccaacggataaaaaatcactgctggctgaagaagcttat
aacattgacggtttagctcagcgtgcagttcgtgccgtaaaggcaaaattcccaagttta
ggtgtgatcaccgacgttgccttggatccattcactacccatgggcaagatggtattatc
gatgacaccggttatgttctaaatgatgtgactaaggatattttggttaaacaagcttta
tcacatgcacaagccggtgctgacatcgttgccccttcggatatgatggatgggcgtata
ggcgcaatacgtaaagaactggaacatcatcattttgttaatacgaaaatactggcttat
tctgccaagtatgcttcgagctactatggcccgtttcgtgatgctgtcggttcagcaggc
aatataaaaggcggcaataaattctcttatcaaatggaccccgccaacagtaatgaagca
ttacatgaagtcgcacaagatattcaggaaggcgcggacatggtaatgatcaagccggga
atgccatatttagatgttgttcgccgggtaaaagatacctttcaagtaccgacttatgct
taccaagtcagtggtgaatatgccatgcatatggcggcaattcagaatggctggttagcc
gaaaaaccttgcgtaatggaaggtttattagcgtttaaacgagcaggtgctgatggcatt
ctcacctattttgctaagcaggtagcccgttggttaaaagaagagcaaaacgcttaa
DBGET
integrated database retrieval system