Clostridium botulinum A Hall: CLC_2253
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Entry
CLC_2253 CDS
T00575
Name
(RefSeq) RNA modification protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cbh
Clostridium botulinum A Hall
Brite
KEGG Orthology (KO) [BR:
cbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbh03009
]
CLC_2253
Enzymes [BR:
cbh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CLC_2253
Ribosome biogenesis [BR:
cbh03009
]
Prokaryotic type
ribosomal protein modification factors
CLC_2253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
TTRAP
DUF2122
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
5398864
NCBI-ProteinID:
YP_001388097
UniProt:
A5I4I1
LinkDB
All DBs
Position
complement(2378769..2380106)
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AA seq
445 aa
AA seq
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MEKIKVALVSLGCDKNRIDSELMLYKLNEEAELVKDPKEAQVIIVNTCGFIETAKEESIN
TILQMASYKKTHNCKVLVVTGCLTQRYKGELKELIPEMDIMLGVNDYDKLLESIKVFLKS
GEKSFYHKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSRKKENI
LKEVENLAKQGVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRLLYCYPEE
ITKELIEEIKNNDKVCKYLDLPIQQISNSVLKRMGRKTTKETIINIIKKLRKEIEGITLR
TSLIVGFPGETEGEFSELKEFVSDVKLDKLGVFKYSKEEGTSAALMEEQIDEEIKEKREE
EIMILQQSISKDINKEKIGKTYEVIVEGTKEDMYYGRNYEMSPEIDGEIYFEKDENVKIG
DIIKVKVTHSLEYDLIGVVYNELSK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaattaaagtagcattagttagcttaggttgtgataaaaatagaattgattca
gaacttatgctatacaaattaaatgaagaagcagaactagtaaaagatcctaaagaagca
caggtaattatagtaaatacctgtggatttattgagaccgctaaggaagaatctataaat
accattttacaaatggcttcctataaaaaaactcataattgcaaagtattagtagttaca
ggatgtttgactcaaagatataaaggggaacttaaagaacttatcccagaaatggatatt
atgttaggggtcaatgattatgataagttacttgaaagtataaaagtttttttgaaatca
ggagaaaaaagtttttatcataaatatagtgatacaaaaataaatgagggaaatagaata
ttaactacgccaacatacacagcctatgtgagaatagcagaaggatgtaataatttttgt
acttactgtgccataccacgcataagaggaaagtatagaagtagaaaaaaagaaaatata
ttaaaggaagtagaaaatttagctaaacaaggagttaaagaaataatattgatagctcaa
gatacaaccatgtatggaatagatatatatggcaaaaaagttttacatgagcttctaaga
gatatttctaaagttgaaggtgtaaagtggataagattattatactgttacccagaggaa
ataactaaggaacttatagaagagattaaaaataatgataaggtatgtaaatatttagat
ttgcctatacagcagataagtaattctgttttaaaaagaatgggaagaaaaactacaaag
gaaactatcataaatataataaaaaaattaagaaaagaaatagagggtattactttaagg
acttcattaatagtaggatttccaggggaaacagaaggagagtttagtgaacttaaagaa
tttgtttcagatgtaaaattagataaattaggtgtatttaaatattcaaaggaagaagga
acgtcagcagctcttatggaggaacaaatagatgaagaaataaaagaaaaaagagaagaa
gaaataatgatacttcagcaaagtatatctaaagacataaataaagagaaaataggtaaa
acatatgaagtcatagtagaaggtaccaaagaagatatgtattatgggagaaattatgaa
atgtcaccggagatagatggagaaatttactttgaaaaggatgaaaacgtaaaaattggt
gatataataaaggtgaaggtaactcatagtttagaatatgatttaataggagttgtttat
aatgaacttagcaaataa
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