KEGG   Caenorhabditis briggsae (nematode): CBG_03063
Entry
CBG_03063         CDS       T01054                                 
Symbol
Cbr-rpb-6
Name
(RefSeq) Protein CBR-RPB-6
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
cbr  Caenorhabditis briggsae (nematode)
Pathway
cbr03020  RNA polymerase
cbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CBG_03063 (Cbr-rpb-6)
  09124 Replication and repair
   03420 Nucleotide excision repair
    CBG_03063 (Cbr-rpb-6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbr03021]
    CBG_03063 (Cbr-rpb-6)
   03400 DNA repair and recombination proteins [BR:cbr03400]
    CBG_03063 (Cbr-rpb-6)
Transcription machinery [BR:cbr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CBG_03063 (Cbr-rpb-6)
  RNA polymerase III system
   RNA polymerase III
     CBG_03063 (Cbr-rpb-6)
  RNA polymerase I system
   RNA polymerase I
     CBG_03063 (Cbr-rpb-6)
DNA repair and recombination proteins [BR:cbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CBG_03063 (Cbr-rpb-6)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 8572774
NCBI-ProteinID: XP_002631259
UniProt: A8WSV7
LinkDB
Position
II:7586055..7586471
AA seq 138 aa
MADDDDYQDMDNDDFVDDNEMEDVIEEEQQRPDHEEEDDDNNVDENFELFDQGKAVPTSE
HVTTPFMTKYERARVLGTRALQIAMGAPVMVELEGETDPLEIARKELKQRRVPIIIRRYL
PDGSYEDWPTEQLQLADW
NT seq 417 nt   +upstreamnt  +downstreamnt
atggcggacgatgatgattatcaagacatggacaatgatgattttgtcgacgataacgaa
atggaagatgtgattgaagaggaacaacagcgcccggatcatgaagaggaagatgatgac
aacaacgttgatgagaactttgagctgttcgatcaaggaaaagctgtcccaactagtgaa
catgtaactactccgttcatgacaaagtacgagcgtgctcgtgttctcggaactcgtgct
ctccaaattgctatgggagccccagttatggtcgagcttgaaggagagaccgatccactc
gagattgccagaaaagaactcaagcaacgtcgcgttccaataatcattcgtcgatatctt
ccagacggatcgtacgaggactggcccaccgaacaacttcaacttgcagattggtag

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