Caenorhabditis briggsae (nematode): CBG_20576
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Entry
CBG_20576 CDS
T01054
Symbol
Cbr-xpo-1
Name
(RefSeq) Protein CBR-XPO-1
KO
K14290
exportin-1
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03008
Ribosome biogenesis in eukaryotes
cbr03013
Nucleocytoplasmic transport
cbr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CBG_20576 (Cbr-xpo-1)
03008 Ribosome biogenesis in eukaryotes
CBG_20576 (Cbr-xpo-1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CBG_20576 (Cbr-xpo-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbr03019
]
CBG_20576 (Cbr-xpo-1)
03009 Ribosome biogenesis [BR:
cbr03009
]
CBG_20576 (Cbr-xpo-1)
03016 Transfer RNA biogenesis [BR:
cbr03016
]
CBG_20576 (Cbr-xpo-1)
03036 Chromosome and associated proteins [BR:
cbr03036
]
CBG_20576 (Cbr-xpo-1)
Messenger RNA biogenesis [BR:
cbr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CBG_20576 (Cbr-xpo-1)
Ribosome biogenesis [BR:
cbr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
CBG_20576 (Cbr-xpo-1)
Pre-60S particles
CBG_20576 (Cbr-xpo-1)
Transfer RNA biogenesis [BR:
cbr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
CBG_20576 (Cbr-xpo-1)
Chromosome and associated proteins [BR:
cbr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
CBG_20576 (Cbr-xpo-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
IBN_N
CRM1_repeat
Motif
Other DBs
NCBI-GeneID:
8577583
NCBI-ProteinID:
XP_002635588
UniProt:
A8XY44
LinkDB
All DBs
Position
V:complement(2147300..2155480)
Genome browser
AA seq
1075 aa
AA seq
DB search
MEVLAQAKQQFAQNDRIDVNLLDQVVRIMNQMSGKEQAEANHILMSLKEDRDSWTKVDAI
LQYSNLNESKYFALQILEGVIQHKWKSLPQVQREGIKTYIISKMLELSSKQETMASNQLL
LHKMNLVLVQIVKQDWPKAWPTFITDIVDSSKTNETVCINNMNILSLLSEEVFDFGSQNL
TQAKEQHLKQQFCGQFQEVFTLCVSILEKCPSNSMVQATLKTLQRFLTWIPVGYVFETNI
TELLSENFLSLEVYRVITLQCLTEISQIQVETNDPSYNDKLCKMFCSTMRHISSVLSLDL
DLAAVYKEASDQDQKFISSLAQFLVAFLKEHVHLIEITDEPLSEAKIMIRDAHDYAIRLL
LKITLIEEMEVFKVCLDCWCWLTAELYRISPFIQPSSIYGMMNNTREHPRRQLYREYLST
LRSAMISRMAKPEEVLIVENDQGEVVREMVKDTDSIALYRNMRETLVYLTHLDNKDTEMK
MTEKLASQVNGGEFSWKNLNRLCWAVGSISGTMVEEDEKRFLVLVIRDLLGLCEQKRGKD
NKAVIASNIMYVVGQYPRFLRAHWKFLKTVINKLFEFMHETHEGVQDMACDTFIKIAIKC
KRHFVIVQPAENKPFVEEMLENLTGIICDLSHAQVHVFYEAVGHIISAQIDGNLQENLIM
QLMDIPNRTWSDIIAAASTNDGVLEEHEMVRSVLNILKTNVAACKSIGSAFVSQLGNIYG
DLLSVYKILSEKVSRAVTAAGEEALRNPLVKTMRAVKREILILLSTFISKNGDAKLILES
IVPPLFDAVLFDYQKNVPQAREPKVLSLLSILVTQLGSLLCPQVPNILGAVFQCSIDMIN
KDMEAFPEHRTNFFELVLSLVQECFPVFMEMPSDDLGTVIDAVVWAFQHTMRNVAEIGLD
ILKELLARVSEQEDKVSQPFYQRYYTALLKHVLAVACDSSQVHVAGLTYYAEVLCALFRA
PEFSIKVPLNMENPQQSNIDYIYESIGSDFQNHFDNMNADQIRIIIKGFFSFNTEISSMR
NHLRDFLIQIKEHNGEDTSDLYLEEREAEIQQAQQRKRDVPGILKPDEVEDEDMR
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggaagttctcgcgcaagccaaacagcaatttgcccaaaatgaccgcatcgacgtcaac
ctgctcgaccaagtggtccgtatcatgaaccaaatgagcggaaaagaacaagccgaagcg
aaccacatcctcatgtcgctcaaggaggatcgcgactcgtggaccaaagtcgacgcgatt
ttgcaatattcgaatctcaacgagtcgaaatatttcgcgcttcaaatcctcgaaggtgtc
attcagcacaaatggaagtcgttgccgcaggtgcaacgcgagggcatcaagacttacatc
atttcgaagatgttggagctctcgagcaagcaggagaccatggcttccaaccaactgttg
ctccataaaatgaacctggtgttggtgcaaatcgtcaagcaagactggccaaaagcgtgg
ccaacgttcatcaccgatattgtcgactcgtcgaagaccaacgagacggtttgcatcaat
aacatgaacattttgagcttgttgagcgaggaagtgttcgactttggatcccaaaacctc
acgcaagccaaggagcaacacctcaagcaacagttctgtggacagttccaagaggtcttc
accctctgtgtctccatcctagagaaatgtccatccaactcgatggttcaagctaccctg
aaaacccttcaacgcttcctgacctggattccagttggctacgtcttcgagaccaacatc
accgagctcctctcggaaaacttcctctccttggaagtctaccgtgtgatcacccttcaa
tgtctcactgagatctcccaaatccaagtggagactaacgatccgagctacaacgacaag
ctttgcaagatgttctgctccaccatgcgccatatctcttcggttctctcgttggatcta
gatttggcggctgtctacaaggaggcctctgatcaggatcagaagtttatcagcagcttg
gcccagttcctggtcgcattcttaaaggagcacgttcacctcatcgaaatcactgacgag
ccgctgtccgaagccaaaatcatgattcgcgacgctcacgactacgccattcgcctcctt
ctcaagatcactctgatcgaggagatggaagtgttcaaagtgtgcctcgattgctggtgc
tggctgaccgctgagctctacagaatctcaccgttcattcaaccaagctccatctacgga
atgatgaacaatactcgtgagcatccacgtcgccagctctaccgagagtatctatccact
cttcgctctgctatgatctccagaatggcgaaaccagaagaagtgctgattgtggagaat
gatcagggagaggtggttcgtgagatggtcaaggataccgattccattgctttgtatcgg
aacatgcgtgagactttagtctatttgacccatttggacaacaaggataccgagatgaag
atgactgagaagctcgcgtcgcaggtcaacggaggagagttctcgtggaagaatctgaat
cgattgtgctgggcggttggatccatttcgggaactatggttgaggaggacgagaagaga
ttccttgttcttgtcattcgggatctccttggtctctgtgagcagaaacgaggaaaggat
aacaaggctgtgattgcttcgaacatcatgtacgtcgtcggacagtacccaagattctta
agagctcactggaagttcctgaagactgtcatcaacaaactattcgaattcatgcacgag
acacacgaaggagtccaggatatggcttgcgacaccttcatcaaaatcgccatcaagtgc
aagagacactttgttatcgttcagccagctgagaacaagccgtttgttgaggagatgctt
gagaatctcaccggaatcatttgtgatttatcgcacgcccaagtgcacgttttctatgaa
gccgtcggtcacataatctcggcgcagatcgacggaaatcttcaggagaatctcatcatg
cagttgatggatattccaaatcgcacttggagcgatatcatagccgccgcttcgacgaac
gacggcgttctcgaggagcacgaaatggttcgatccgttttgaatattctgaagaccaat
gtggcggcgtgcaagtcgattggatccgcgtttgtctcgcagcttggaaatatctatggg
gacttgctctcggtctacaaaatcctctccgagaaggtgtctcgtgcagtgaccgcggct
ggagaagaagcgctgcgcaatccgttagtgaagacgatgcgtgctgtgaagcgagagatt
ctcatcctcctctccacgttcatctcaaagaacggtgatgccaagctgattctagagagc
atcgtcccaccgctcttcgacgctgtgctattcgattatcagaagaatgtgccacaagcc
agagagccgaaggttctctcattgctcagcattctcgtcacccagcttggatccctcctg
tgcccacaagtaccaaacatcctcggcgccgtgttccaatgcagcatcgacatgatcaac
aaggatatggaggcgttccccgagcaccgtaccaacttcttcgagctcgtcctctcgctg
gtccaagagtgtttcccagtgttcatggagatgccttccgatgatctcggcactgtcatc
gacgccgtcgtctgggcattccagcacacaatgcgtaatgttgccgagattggtctcgac
atcctcaaagaacttttggctcgtgtctcggagcaggaggacaaggtctcccagccattc
taccaacgatactacaccgctctcctgaagcacgtccttgccgtcgcttgtgacagctcc
caggtccacgtagccggtctgacctactacgccgaggtgctgtgtgctctgttccgtgcg
ccagagttctcgatcaaggtgccgttgaacatggagaatccgcaacaatcgaacattgac
tacatctacgagagcattggtagcgacttccagaatcattttgataacatgaatgccgac
caaatccgcatcatcatcaagggcttcttctcgttcaacactgagatctcgtcgatgcgc
aaccatctccgcgacttcctcatccagatcaaggagcacaatggcgaggacacatcggac
ctgtatctcgaggagcgcgaggccgagattcaacaagctcaacagcgaaagcgcgacgtg
cccggaattctgaagccagatgaggtggaagatgaggatatgcgctaa
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