Citrobacter braakii: A6J81_05240
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Entry
A6J81_05240 CDS
T04825
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
cbra
Citrobacter braakii
Pathway
cbra02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cbra00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A6J81_05240
Enzymes [BR:
cbra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
A6J81_05240
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
ARC40178
LinkDB
All DBs
Position
1051596..1053587
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AA seq
663 aa
AA seq
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MKDVRELVTLYSYVGTHNPYWRLSEDCNILHFSIDETSGADQTIELSPEQADRIREMTVI
TSSLLMTLPIEDDDIPVHLVGRKINKREWAGSASAWDDTPSVARDLAHGLSFAEQVVSEA
NSVIVILDRMGNIQRFNRLCEEYTGLKEREVIGQSVFTLFMSRREAAASRRNIEVFFREG
NSYEVERWVKTCKGQRLFLFRNKFVHNGSGKNEIFLICSGTDITEERRAQERLRVLANTD
SITGLPNRNAIHELIGNAIENAGDTQVGIVYLDLDNFKKVNDAYGHMFGDQLLQSVSLAI
LSCLDDNQILARFGGDEFIVLATETSQGTLEATASRILTRLRQPFRIGLIEIYTGCSIGI
SLAPQHGQDCESVIRNADTAMYTAKEGGRGQFCVFSPEMNQRVFEYLWLDTNLRKALEND
QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVILDVV
RQVAKWRAKGINLRVAVNVSARQLADQTLFTALKQVLQELNFEYCPIDVELTESSLIENE
QLALSVIQQFSQLGAQIHLDDFGTGYSSLSQLARFPLDAIKLDQTFVRDVHKQSISQSLV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGVNERQGFLFAKPMPAAAFERWYRRHLSK
KMR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgtccgggagctggttacgttgtatagctatgtgggcactcataacccctac
tggcgtttgtcagaggattgcaacatcctgcatttctctatcgacgaaacgtcaggcgcc
gatcagaccatcgagttatcacctgaacaagccgatcgcattcgcgagatgacggtgatt
acgtcaagtctgttaatgacgttgcccattgaagatgacgacatacctgtgcatctggtc
ggtcgaaaaatcaataaacgcgaatgggccggaagcgcatccgcctgggatgacacccct
tccgtcgcccgcgacctggctcacgggctctcttttgccgaacaggtcgtttctgaagcc
aattccgttattgtcattcttgaccggatgggcaacattcagcggtttaatcgcctgtgt
gaagagtacactggcctcaaagaacgtgaagttattggccaaagtgtattcacattattt
atgagtcgacgtgaggctgcggcttcacggcgcaatatcgaggtctttttccgcgaaggt
aattcgtatgaggttgagcgctgggtgaaaacctgcaaaggccagcgtctgtttctgttt
cgcaataaatttgtgcataacggtagcggcaagaacgaaatatttctgatctgttccggg
accgatatcactgaagaacgccgcgcgcaggagcgactacgggtgttggcaaataccgac
tccatcacaggcttacctaaccgcaacgcaattcatgaactgatcggcaatgcgattgag
aacgcaggcgatacgcaggtcgggattgtgtacctcgatctggataacttcaaaaaggta
aacgatgcctacgggcatatgtttggcgatcaattattacaaagcgtatcgctggcaatc
ctcagttgtctcgacgacaaccagatactggcgcggtttggcggcgatgaattcattgtc
ctggccaccgaaacatcccagggcacactggaagctaccgcatcacgcattctgacgcgc
ctgcgccagccatttcgcatcggcctgattgaaatctataccggatgctctattggtatt
tccctcgcacctcagcatggtcaggactgcgagagcgtcattcgtaatgcggatacagcc
atgtacaccgcaaaagaaggcggtcgcggacagttttgtgttttctctccggaaatgaat
cagcgcgtatttgaatatctgtggctggataccaatctgcgtaaggcgctggaaaacgat
cagttggttatccattatcagccaaagataacctggcgcggtgaagtgcgtagtctggag
gcgctggtacgctggcagtccccggaacgtggcctcattcccccactggagtttatatcc
tacgccgaagaatcggggctcatcgtcccgctgggtcgttgggttattctcgacgtagtg
cgccaggtcgcgaaatggcgcgccaagggcataaacctgcgcgtggcggtaaacgtttct
gcccgccagctcgccgaccagacgctttttaccgcactgaagcaggtacttcaggaactc
aactttgagtattgccccatcgatgttgaattaacggaaagcagcctgattgaaaatgaa
caactggcgttgtccgttattcagcaatttagtcagttgggagcgcaaatccatttggat
gattttggtaccggttattcgtcgctgtcgcaactggcccgcttcccgctggatgcaatt
aaactggatcagacctttgtccgagatgtacacaagcaatccatttcacagtcgctggtg
cgagccattgttgcagtagcacaggcgctcaacctgcaggtgattgctgaaggcgtggaa
agcgcgaaagaggatgcgtttctgaccaaaaatggcgtcaatgagcgtcaggggttttta
ttcgctaaaccaatgccagcagccgcatttgaacgttggtatcgccgacatctgagtaaa
aaaatgcgttaa
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