Corvus brachyrhynchos (American crow): 103613324
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Entry
103613324 CDS
T08418
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03440
Homologous recombination
cbrc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103613324 (BRIP1)
03460 Fanconi anemia pathway
103613324 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbrc03400
]
103613324 (BRIP1)
Enzymes [BR:
cbrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103613324 (BRIP1)
DNA repair and recombination proteins [BR:
cbrc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103613324 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
103613324 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
DUF2703
Motif
Other DBs
NCBI-GeneID:
103613324
NCBI-ProteinID:
XP_017586447
LinkDB
All DBs
Position
Unknown
AA seq
1261 aa
AA seq
DB search
MPSDGAEYTIGGVKILFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSA
LSWQQSLYEKSVPTSSCEKEERKAEPSPPCHCKCHSQSKSNEAATSGTHSAPSSANNPDT
GTSRKPGSPLTNTECKENETLASKLSAKKKLSLRDSENDDFQVDRKRIRPLETEQQQVRK
RHCFAKGVQLVDALEVYHQRKNGELTVHSEKSMKTTSFAPQTPPGPCTECSCSFGKEPDK
DPSHAKKKENGDRLCVPKIFFGTRTHKQITQISRELKRTAYSCVPMTILSSRDYTCIHPV
VSHSSNRNEMCVELLEGKQGKSCSYYHGVHKLSEHHALQSASRVYQAWDIEDLVSLGRKL
RACPYFAARELMMEADIVFCPYNYLLDPQIRESMDIKLKDQVVILDEAHNIEDCARESVS
YGVTESQLRAAREELDFMVNNNIRQKHHEPLRAVCCSLINWLQDSFGQLVERAYETACKV
WSGKEMLNFLHKMGITGISFPILQKHLATVLEKEEKVSMYGREELIEVPVVSPATQIVLK
GLFMVLSCLFKDNSRFADDYRVALQQTYTWMSENQHDDADTSSFFTRPKHKKSSRQKTLV
HMLNFWCLNPAVAFSDLNEVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVW
VGTVGAGPNGRKLCATFQHTETFEFQDEVGALLLSVCQTVGQGILCFLPSYKMLDKLKDR
WMHTGLWRNLEDVKTVIAEPQGGAKSDFDELLKIYYDAIKSKGEKDGALLIAVCRGKVSE
GLDFCDENARAVVTIGIPFPNVKDLQVELKRKYNDQHKSTRGLLSGSQWYEIQAYRALNQ
ALGRCIRHRNDWGALILVDDRFRNNPTKYITGLSKWIRQQIQHHGNFGSALESLHAFALR
NQGTGDASSEHGREFPSHSRDLSQGSQQEATIHLSPDVPAKSQGQNLGSEVHFTAAISSV
HPTASDQPSCRTATVKQSDQKVDVESHSHHVEQRRKHMDSSPKMPAIKMETEKMNGWTSA
DIVEENCCSKPLTSTPVAKNCRATVSSRQEHVNWPSDLSDNLNQCQSSLIAEHKPSGPES
CLETTNFSVQNAEAPAAEGHPDKLQLPAEPCRDFPSAAGRAEPSALNVAEDEDESIYFTP
ELYDDAEPEEQRIESHLPACCAVGNWVECGNSTVPADLFAINAAETLNVTEKTEAGRRSP
HGIMENERSRDSAVDAVEVAGAAEADQGGSQGMDTPKRKISLSRSRNKGVSSFLLGNSGT
R
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgatggggcagaatatacaattgggggggtgaagatcctcttcccctgcaag
gcttacccctcccagctcgctatgatgaatgctattgttaaaggcttgaataacaggcag
cactgtttgctggagagccctacaggaagtggcaaaagcttggcattactttgttctgca
ttatcgtggcagcagtctttgtatgagaaatcagtgccaacctcatcatgtgagaaggaa
gagaggaaggcagagccgtccccaccgtgtcactgcaaatgtcactcccagtctaagagc
aacgaggctgcaacgagtgggactcacagtgctccttcttctgccaataatcctgacacg
ggaacttccaggaaacctggaagcccattgacaaacacagaatgtaaggaaaatgaaaca
ctagcttcaaaactgtctgccaaaaaaaagttatctcttcgtgacagtgagaatgatgac
tttcaagtagacaggaaaaggattcgtcctttagaaacagagcagcagcaggttagaaaa
cgtcactgctttgcaaaaggagtgcagctggttgatgctttagaagtttatcaccagaga
aaaaacggagagttgactgttcactctgaaaaaagcatgaaaaccactagttttgctccc
caaacacctcctggcccttgcactgagtgttcctgttcttttggaaaagaacctgataaa
gatcccagtcacgcaaagaagaaagaaaatggagatcggttgtgtgttcccaaaattttt
tttgggacacgaacacacaagcaaataacgcagatcagcagggagctgaagaggacagcg
tattcttgtgtccccatgacaatcctttccagcagggattatacctgtattcatccagtg
gtatcccacagtagtaacaggaatgaaatgtgtgtagaattgctggaaggaaagcaaggc
aagtcctgttcttattaccatggtgttcataagctcagtgagcaccatgccctgcagtct
gcatccagggtgtaccaggcttgggacattgaagacctggtgagcctgggcaggaagctt
cgtgcctgtccctattttgcagccagagaactcatgatggaggcagacatcgtgttttgt
ccttacaattatctcctggacccacagatccgggagagtatggacattaagctaaaagac
caagtagtcatcttggatgaagcccataacattgaggactgtgctcgggagtccgtgagc
tacggggttaccgagagccagctcagagctgcccgagaggagctcgatttcatggtcaac
aacaacatcaggcagaagcatcatgagcccctccgagctgtgtgctgctccttgataaac
tggttgcaggacagctttgggcagctggtagagagagcctatgaaactgcctgtaaggtg
tggagtggcaaagaaatgctcaactttttgcacaaaatgggaataactgggattagtttt
cccattttacagaaacaccttgccactgtcctggaaaaagaagaaaaagtgtctatgtat
gggagagaggaacttattgaggtgccagttgtgagccctgcaacacagatagtgctcaaa
ggcttgttcatggtcctttcctgtctcttcaaagataacagcagatttgcagatgattac
agggttgctctacaacaaacttacacctggatgagtgaaaaccagcatgatgatgcagat
acaagttccttcttcacaaggcctaagcacaaaaagagttcaaggcagaaaacccttgtc
cacatgctgaatttttggtgcttgaaccctgctgtggctttttctgacttaaatgaagtt
agaacaattgttctgacatcaggcacactctctcccatggattccttttcctcagagctt
ggtgtgaagttttccattcagctggaggcgaatcacgttatccggaattcccaggtttgg
gttggcactgttggagcaggccccaatgggcggaagttgtgtgcaacattccagcacaca
gagaccttcgagttccaggatgaggtgggagcactgctgctttcagtttgtcagacagtt
ggccaaggaattttgtgctttttgccatcctataagatgctggacaagttaaaggatcgt
tggatgcacactggcttgtggagaaacctggaggatgttaaaacagtcattgcagagccc
cagggaggggccaagagtgactttgatgagctgctgaaaatctactatgatgcaatcaaa
agtaaaggagaaaaagatggagctctcctgatagctgtgtgcagagggaaggtcagtgag
gggctggatttctgtgatgagaatgccagggcagttgtgaccatcggaatcccctttcca
aacgtgaaggaccttcaggttgaattgaagaggaagtacaatgaccagcacaaaagtaca
agaggccttttatcagggagtcagtggtatgaaattcaagcttacagagctcttaaccaa
gccctgggaaggtgtataaggcacaggaatgactggggggctcttattttagttgacgac
cgcttcaggaataaccccactaaatacataactggattatctaagtggatccgtcagcag
atccagcaccatgggaatttcggcagcgctctggaatccctgcacgcgtttgccctcaga
aaccaggggactggggatgcttcctcagagcatggcagggaattcccttcccattccagg
gacctgtcacaaggctctcagcaagaggcaaccattcatctgtcaccagatgttcctgct
aaaagtcaggggcagaatttgggctcagaagttcattttactgcagccatcagctcagtt
catcccacagcatcagatcagccaagttgcaggacggcaacagtgaaacaaagtgaccaa
aaagttgatgtagagagccattctcaccatgtagaacaaagaaggaaacatatggactcc
tcccccaaaatgccagcaattaaaatggagacagaaaaaatgaatggatggactagtgct
gatattgtggaagagaattgctgctctaaaccactgacttcaactcctgtggccaagaac
tgcagggccacagtgagcagcagacaggagcatgtgaattggcctagtgaccttagtgat
aatttaaatcaatgccaatcatcattaattgcagaacataaaccaagcggaccagaatca
tgtttggaaacaactaatttttcagttcaaaatgctgaggctccagctgctgaaggacat
cctgataaactccagcttccagctgagccctgcagggatttcccttcagcagcagggaga
gctgagccttcagcattaaatgtggctgaggatgaggatgagagcatttacttcacccca
gaactctatgatgatgcagaaccagaggaacagagaattgaatcccaccttccagcctgc
tgtgctgttgggaattgggtggaatgtgggaactccacagtccctgctgatctttttgcc
atcaacgccgcagaaacactgaacgtgactgaaaaaactgaggctggcaggagaagtccc
catggaattatggaaaatgagaggagcagggacagtgcagttgatgctgtagaggtggct
ggtgcagcagaagcagatcagggaggatctcaggggatggacacccctaaaaggaaaatc
agcctttccagatcccgaaataaaggtgtgtcatcctttctgctgggcaatagtggcacc
aggtga
DBGET
integrated database retrieval system
