KEGG   Cupriavidus basilensis: RR42_m4098
Entry
RR42_m4098        CDS       T03642                                 
Name
(GenBank) Transcriptional repressor of PutA and PutP
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
cbw  Cupriavidus basilensis
Pathway
cbw00250  Alanine, aspartate and glutamate metabolism
cbw00330  Arginine and proline metabolism
cbw01100  Metabolic pathways
cbw01110  Biosynthesis of secondary metabolites
Module
cbw_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:cbw00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    RR42_m4098
   00330 Arginine and proline metabolism
    RR42_m4098
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cbw03000]
    RR42_m4098
Enzymes [BR:cbw01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     RR42_m4098
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     RR42_m4098
Transcription factors [BR:cbw03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    RR42_m4098
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH
Other DBs
NCBI-ProteinID: AJG21446
UniProt: A0A0C4YLD3
LinkDB
Position
main:complement(4349292..4353293)
AA seq 1333 aa
MATTTLGVKLDDASRERLKRVAQSIDRTPHWLIKQAIFTYLEQVERGNIPHETSAAGTGS
EGAADGADAFDGAASDGAIQPFLEFAQSVQPQSVLRAAITAAYRRPESECVPVLLEQARL
PHQQAEAALAMARTLATRLRERKVGTGREGLVQGLIQEFSLSSQEGVALMCLAEALLRIP
DKATRDALIRDKISGANWQSHLGQSPSVFVNAATWGLLFTGKLVATHTEAGLSKALTRII
GKGGEPLIRKGVDMAMRLMGEQFVTGETISEALANARKYEAEGFRYSYDMLGEAAMTEAD
AQRYLASYEQAINAIGQASRGRGIYEGPGISIKLSALHPRYSRAQHERVIGELYGRLKSL
TLLARQYDIGINIDAEEADRLEISLDLLERLCFEPELAGWNGIGFVVQGYQKRCPFVIDY
LIDLARRSRHRLMIRLVKGAYWDSEIKRAQVDGLEGYPVYTRKVYTDVSYVACARKLLSV
PDVIYPQFATHNAHTLAAIYQIAGHNYYPGQYEFQCLHGMGEPLYDQVVGPLADGKFNRP
CRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADDTISLDELVADPVAVVEQMHADEG
ALGLPHPRIAQPRTLYGESRANSAGIDLSNEHRLASLSSALLAGTSEAVSAVPLLGTEAA
AGEDVNQPAPVRNPSDQRDVVGHVTEASMAEVEAALQAAVNAAPIWQATPADVRAAALER
AAELMEAQMQSLMGIIVREAGKTFSNAIAEVREAVDFLRYYAAQVRETFSSDTHRPLGPV
VCISPWNFPLAIFTGQVAAALAAGNTVLAKPAEQTPLIAAQAVRLLREAGVPAGAVQLLP
GRGETVGAALVGDARVKGVMFTGSTEVARLLQRSVAGRLDAAGRPVPLIAETGGQNAMIV
DSSALAEQVVGDVVNSAFDSAGQRCSALRVLCLQEEVADRVLEMLKGAMDELTMGNPDRL
STDVGPVIDEEARGNIVRHIDAMRAKGRRVHQADPNGALSAACRNGTFVSPTLIELDSIE
ELQREVFGPVLHVVRYPRAGLDTLLAQINGTGYGLTMGIHTRIDETIEHIVERAEVGNLY
VNRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYLHRLLSVCPLDAVARVVRASDTVGGADE
TGPVRRTLTETLATLKEWAQRESAALPGLVAACERFAAASAAGLSVTLPGPTGERNTYTL
LPRAAVLCLAQQETDLAVQLAAVLAAGSQAVWVESPMARALFARLPKAVQSRVRLVADWS
AGDTGFDAVLHHGDSDQLRAVCEQLATRPGPIISVQGLAHGEPNIAIERLLIERSLSVNT
AAAGGNASLMTIG
NT seq 4002 nt   +upstreamnt  +downstreamnt
atggccaccaccaccctcggcgtcaaactcgacgacgcctcccgcgagcgcctcaagcgc
gttgcgcagtcgatcgaccgcacgccgcactggctgatcaagcaggcgatcttcacgtat
ctggagcaagtcgaacggggcaacatcccgcatgagaccagcgccgccggtacggggagc
gagggtgcggcggacggcgccgacgcctttgacggtgcggctagcgatggcgcgatacag
cctttcctcgagtttgcgcagagcgtgcagccgcaatcggtgctgcgcgccgccatcaca
gccgcttatcgccgcccggagtccgagtgcgtgccggtgctgcttgagcaggctcgcctg
ccacatcagcaggccgaagccgcacttgccatggcccggaccctggccacgcgattgcgt
gagcgcaaggtcggcaccggccgcgaagggctggtgcagggcctgatccaggagttctcg
ttgtcctcgcaggaaggcgtggcgctgatgtgcctggccgaggcgctgctgcgcattccc
gacaaggccacccgcgacgcgctgatccgcgacaagatcagcggcgccaactggcagtcg
cacctgggccagagcccgtcggtgttcgtcaatgccgccacctggggcctgctgtttacg
ggcaagctggtggctacgcataccgaagccggcctgtccaaggcgctgacccgcatcatc
ggcaagggcggcgagccgctgatccgcaagggcgtggacatggcgatgcgcctgatgggc
gagcagttcgtcaccggcgagaccatttccgaggcgctggccaacgcgcgcaagtacgag
gccgagggcttccgctactcctacgacatgctgggcgaagcggccatgaccgaggccgac
gcgcaacgctacctggcctcctacgagcaggccatcaatgccatcggccaggcttcgcgc
gggcgcggcatctatgaaggccccggcatctcgatcaaactctcggcgctgcatccgcgc
tatagccgcgcgcagcatgagcgcgtcatcggcgagctgtacggccgcctcaagtcgctg
accttgctggctcggcagtacgacatcggcatcaatatcgacgccgaggaagccgaccgc
ctggaaatctcgctcgacctgctggagcgcctgtgcttcgagcccgagctggccggctgg
aacggcatcggcttcgtggtgcagggctaccagaagcgctgcccgttcgtgatcgactac
ctgatcgacctggctcgccgcagccgccaccgcctgatgatccgcctggtcaagggcgcg
tactgggatagcgagatcaagcgcgcccaggtggacgggctggagggctatccggtctac
acgcgcaaggtctataccgacgtgtcctacgtagcctgcgcgcgcaagctgctgtcggtg
ccggacgtgatctacccgcagttcgctacccacaacgcccacacgctggcggccatctat
cagatcgccggtcacaactactaccctggccagtatgagttccagtgcctgcacggcatg
ggcgagccgctgtacgaccaggtggtcggcccgctggctgatggcaagttcaaccgcccg
tgccggatctacgcgccggtcggcacgcatgagacgctgctggcctacctggtgcgccgc
ctgctggaaaacggcgccaacacgtccttcgtcaaccgcatcgccgacgacaccatctcg
ctggacgaactggtggccgacccggtggccgtggtcgagcagatgcacgccgatgagggc
gcgcttggcctgccgcatccgcgcattgcgcagccacgcaccctttacggcgagtcgcgc
gccaattctgccggcatcgacctgtccaacgagcatcgcctggcctcgctgtcgtccgcg
ctactggccggcacgagcgaggcggtcagcgctgtgccgctgctgggcacggaagccgcc
gcgggcgaggacgtcaatcagccggcacccgtgcgcaacccgtccgaccagcgcgacgtg
gtcggccatgtcaccgaggccagcatggccgaggtggaagccgcgctgcaggccgccgtc
aacgccgcgccgatctggcaggcgaccccggccgacgtgcgcgccgccgcgctggagcgc
gccgcggaactgatggaagcgcagatgcagtccctgatgggcatcatcgtgcgcgaggcc
ggcaagaccttctccaatgccatcgccgaagtgcgcgaggccgtggactttctgcgctat
tacgccgcgcaagtgcgtgagaccttctccagcgacacccatcgtccgctcgggccggtg
gtctgcatcagcccgtggaatttcccgctggccatcttcaccggccaggtcgcggccgcg
ctggctgccggcaacaccgtgctggccaagcccgccgagcagaccccgctgatcgccgcc
caggcggtgcgcttgctgcgcgaggctggggtgccggctggcgccgtgcagttgttgccg
ggccggggcgaaaccgtgggcgccgcgctggtcggcgacgctcgcgtcaagggcgtgatg
ttcaccggctccaccgaagtggcgcgcctgctgcaacgcagcgtggccggccggctggac
gcggctggccgcccggtgccgctgatcgccgagaccggcggccagaacgcgatgatcgtg
gactcctccgcgctggccgagcaggtggttggcgatgtggtcaactccgccttcgactcg
gccggccagcgctgttccgcgctgcgcgtgctgtgcctgcaggaagaagtggccgaccgc
gtgctggaaatgctcaagggcgcgatggatgagctcaccatgggcaacccggaccgtttg
tccaccgatgtcggcccggtcatcgacgaagaggcgcgcggcaacatcgtgcgccatatc
gacgccatgcgcgccaagggccgccgcgtccaccaggccgacccgaacggcgcgctcagc
gcggcctgccgcaatggcacgtttgtgtcgccaacgctgatcgaactcgacagcatcgaa
gaactgcagcgcgaagtctttggccccgtgctgcatgtggtgcgctacccgcgagccggc
cttgacacgctgcttgcgcagatcaacggcaccggctacggcctgaccatgggcattcac
acccgtatcgacgagaccatcgagcacatcgtcgagcgcgcggaagtgggcaacctctac
gtcaaccgcaatatcgtgggcgcggtggtgggcgtgcagcccttcggcggcgaaggcctg
tccggcaccggccccaaggcgggcggcccgctgtacctgcaccgtctgttgtcggtctgc
ccgctggacgccgtggcccgcgtggtgcgcgcctccgacaccgtcggcggcgccgacgag
accggcccggtgcgccgcacgctgaccgagacactggctacgctcaaggaatgggcgcag
cgcgagagcgcggcgctgcccgggctggtggcggcgtgcgagcgctttgccgcggcctcg
gcggccggcctgtcggtcacgctgcccggccccaccggcgagcgcaacacctacacgctg
ctgccgcgcgccgccgtgctgtgcctggcccagcaggagaccgacctggctgtgcaactg
gcggcggtactggcggctggcagccaggcggtgtgggttgaaagccccatggcccgggcc
ctgtttgcgcgcctgcccaaggcagtacaatcgcgcgtccgcctggtggccgactggtcg
gccggcgataccggcttcgacgcggttctccaccatggcgattccgaccagctgcgcgcg
gtatgcgaacagctggccacgcgccccggcccgatcatttcggtgcaaggcctggcacat
ggtgaaccgaatatcgccatcgagcgtttgttgatcgagcgttcgctgtccgtcaatacg
gcggcagcgggtggcaatgcgagtttgatgacgatcggctaa

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