Candidatus Symbiobacter mobilis: Cenrod_0295
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Entry
Cenrod_0295 CDS
T02877
Symbol
rsmD
Name
(GenBank) ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
cbx
Candidatus Symbiobacter mobilis
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbx03009
]
Cenrod_0295 (rsmD)
Enzymes [BR:
cbx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
Cenrod_0295 (rsmD)
Ribosome biogenesis [BR:
cbx03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Cenrod_0295 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
Methyltransf_31
Methyltransf_25
MTS
MethyltransfD12
SAM_MT
Methyltransf_24
Methyltransf_11
Methyltransf_15
Response_reg
UPF0020
Motif
Other DBs
NCBI-ProteinID:
AGX86419
UniProt:
U5N8C6
LinkDB
All DBs
Position
325745..326503
Genome browser
AA seq
252 aa
AA seq
DB search
MVCGFLFGVDSSSITRLDRVCMSGSSSTERLSVQPLVRPTAPHTVRLIGGAFRGRKLPVL
DAPGLRPTPNRVRETLFNWLGQDLRGRRCIDAFAGTGALGFEAASRGAVAVAMVDRNPAV
VARLRAACKALGAGQVQVQCGDAMAALQRCAAGSMDVVFLDPPFQEDVAMADLLRWAARA
IGPHGCVYLESGQPWEPKALHPLRLHRHTRAGAVHAHLLVPGADGAASLVDGNAHVSATV
CAHVGMEGRKNG
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgtggattcctcttcggtgtggattcttcttcgataacccgcctcgaccgtgtt
tgtatgagcggttcatcgtctacggaacgactttcggtgcagcccctggtgcggcctaca
gcgcctcacacggtgcgcctgattggaggcgcattccgtggcagaaagttgccggtgctt
gatgcacccggcttgcgccccacgccgaatcgggtacgggagacgctcttcaattggctg
gggcaagatttgcgtggacggcgctgtatcgatgcgttcgccggtaccggcgccctgggt
ttcgaggctgcgtcgcgcggggctgttgcggtggccatggtggatcgcaatcccgccgtc
gttgcgcggttgcgtgcagcatgcaaagccttgggggcagggcaggttcaagtgcagtgc
ggtgatgccatggctgccttgcagcgttgcgcagcggggagcatggatgtcgtctttctc
gaccctccttttcaggaagacgtagcaatggcggaccttttgcggtgggcggcgcgagct
attggcccccatggctgcgtctatctggagtccggccagccttgggaaccaaaggcattg
catcccttgcgcctgcatcgccacacccgcgctggcgctgtccatgcgcatttgctggtg
cctggggctgatggggctgcttcgctggtggatgggaatgcgcacgtcagtgcgactgtg
tgcgcgcatgtcggcatggaaggacgcaagaatggctga
DBGET
integrated database retrieval system
