Cutaneotrichosporon cavernicola: CcaHIS019_0308330
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Entry
CcaHIS019_0308330 CDS
T09540
Symbol
RPB9, CcaverHIS019_0308330
Name
(RefSeq) uncharacterized protein
KO
K03017
DNA-directed RNA polymerase II subunit RPB9
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03020
RNA polymerase
ccac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CcaHIS019_0308330 (RPB9)
09124 Replication and repair
03420 Nucleotide excision repair
CcaHIS019_0308330 (RPB9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccac03021
]
CcaHIS019_0308330 (RPB9)
03400 DNA repair and recombination proteins [BR:
ccac03400
]
CcaHIS019_0308330 (RPB9)
Transcription machinery [BR:
ccac03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
CcaHIS019_0308330 (RPB9)
DNA repair and recombination proteins [BR:
ccac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CcaHIS019_0308330 (RPB9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_POL_M_15KD
TFIIS_C
zf-C2H2_jaz
C1_1
Zn_ribbon_recom
DZR
Anti-TRAP
Zn_Tnp_IS1595
NMD3
Motif
Other DBs
NCBI-GeneID:
85494633
NCBI-ProteinID:
XP_060456028
LinkDB
All DBs
Position
3:join(2228350..2228400,2228442..2228563,2228746..2228953)
Genome browser
AA seq
126 aa
AA seq
DB search
MPSLKFCGECNNLLYPRSDNLNKVLLYQCRNCQYAENATSEPGWAPCVYKNDLLTIALEQ
AGQTQDLETDPTLQRSQIECPKCHKNGAVFYQDQAKRLTTNMTLFYYCIHCKKPFRDEKA
VAKSSY
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcattaaagttctgcggagagtgtaacaacctcctgtacccgcgtagcgacaac
ctgaacaaagtgctgctgtaccagtgccgtaattgccagtatgcggagaacgcaacgtcg
gagcctggatgggcgccgtgcgtgtacaagaatgacctgttgactattgcacttgaacag
gcaggccagacacaggacctcgagaccgacccgacgctgcagcgttcgcagatcgagtgt
cccaagtgtcacaagaatggcgccgtcttctaccaggatcaggcgaagcggctcacgacc
aacatgaccctcttctactactgtatccactgcaagaagccgttccgtgacgagaaggct
gtggccaagtcttcgtattag
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