Cervus canadensis (wapiti): 122433117
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Entry
122433117 CDS
T07554
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04010
MAPK signaling pathway
ccad04020
Calcium signaling pathway
ccad04713
Circadian entrainment
ccad04925
Aldosterone synthesis and secretion
ccad04927
Cortisol synthesis and secretion
ccad04929
GnRH secretion
ccad04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122433117 (CACNA1H)
04020 Calcium signaling pathway
122433117 (CACNA1H)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
122433117 (CACNA1H)
04925 Aldosterone synthesis and secretion
122433117 (CACNA1H)
04927 Cortisol synthesis and secretion
122433117 (CACNA1H)
09159 Environmental adaptation
04713 Circadian entrainment
122433117 (CACNA1H)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
122433117 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccad04040
]
122433117 (CACNA1H)
Ion channels [BR:
ccad04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122433117 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
122433117
NCBI-ProteinID:
XP_043311616
LinkDB
All DBs
Position
32:40035809..40092983
Genome browser
AA seq
2349 aa
AA seq
DB search
MTEGVQAVDEVRVPLGAPAPGPAAAASPASPGAPGPEAERGSGPSASPPESPAAERGAEL
GADEEQPVPYPALAATVFFCLGQTTRPRSWCLRLVCNPWFEHVSMLVIMLNCVTLGMFRP
CEDVECRSERCGILEAFDDFIFAFFAVEMVIKMIALGLFGQKCYLGDTWNRLDFFIVMAG
MMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFF
IFGIVGVQLWAGLLRNRCFLDSTFARNSNLSFLRPYYQPEEGEENPFICSSRRDNGMQKC
SHIPSRRELRVECTLGWEAYGQPQAEGAGGTGHHTCINWNQYYNVCRSGDSNPHNGAISF
DNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQ
FSETKQRENQLMREQRARYLSNDSTLASFSEPGSCYEELLRYVGHVCRKLKRRGLRLYAR
WQSRWRKKADPGGAVRGRDSGRRPRRAGGRTASVHHLVYHHHHHHHHHYHFSHGSPRRPG
PEPGAGDARLVRAGGPASPGRGPPDAESVHSVYHADCHVEGPQERARVAHAAATAAAGLK
LAAGLGAMNYPTILPSATGTGKGGLGPKGKRPGGPPGAGGHSPLRLSSPDPCEKIQHLVG
EHGLGQTPSRLSGLSVPCPLPSPQAGTLTCELSSCPYCTSALEDPELEFSDSGSGDSDSN
GVYEFTQDVRHGDHRDPMQSPPEAEAPGAGGTRRRGPRRAAAGEQGGLGRIWASFSGKLR
RIVDSKYFNRGIMVAILTNTLSMGVEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAC
GPLGYIRNPYNIFDGIIVVISVWEIIGQADGGLSVLRTFRLLRVLKLVRFMPALRRQLVV
LMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTV
FQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDATRS
DTDEDKTSTHLEEDLDKFRDLRATEMKMYSLAVTPNGHLEGRGSLPPPLIMRTAATPMPT
PKSSPHLDAAPGPLDSRRGSSSSMDPQLGDQKSLSSLRSSPCAPWGPNSAWSSRRSSWNS
LGRAPSLKRRSQCGERESLLSGEGRGSGSTDEEAEDGRPGAGASPGTRATPLRRAESLDH
RSTLDLRPPRPATLLPTKTHDCNGQVLALPSEFFLRIDSHKEDPAEFDDDVEDSCCLRLQ
KVLEPHKPECCRSREPWALYLFSPQNRFRVSCQKIIAHKMFDHIVLVFIFLNCITIALER
PDIDPGSTERVFLSVSNYIFTAIFVVEMMVKVVALGLVSGEHAYLQSSWNILDGVLVLVS
LVDIVVAMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVL
ICCAFFIIFGILGVQLFKGKFYYCEGADTRNISTKAECRAAHYRWVRRKYNFDNLGQALM
SLFVLSSKDGWVNIMYDGLDAVGVDQQPVPNHNPWMLLYFISFLLIVSFFVLNMFVGVVV
ENFHKCRQHQEAEEARRREEKRQRRLERKRRSTFPNPEAQRRPYYADYSPTRRSIHTLCT
SHYLDLFITFIIGVNVITMSMEHYNQPKALDEALKYCNYVFTIVFVVEAVLKLVAFGFRR
FFKDRWNQLDLAIVLLSIMGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGM
RALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCEGLSRHATFSNFG
MAFLTLFRVSTGDNWNGIMKDTLRECAREDKHCLTYLPAISPIYFVTFVLVAQFVLVNVV
VAVLMKHLEESNKEAREDAELDAELEMEMAQGSPARPRPAAPQSPGASPDSPNVLVVRKV
SVSRMLSLPNDSYMFRPVVPAAAAHPHPLQEVEMETYAGASGRVTTAHSPPVESCASLQV
PSAVSSPARGGDTLCALPPRGAARLPSVGRLLCRQEAVRTESLEGQVDGTGASSPYWGES
GGKTPVRQASLGPSMRSPPRSPRPASIRTRKHTSGQHCLSSRPPAPGGEEAEAPDPADEE
VSHITSSARSPSASPTARGMVGGEPDLHRLYSVDARGFLDQPGRVDEQRRPSGEPGVGDS
RPEAGEAKPRALEAELALGARRKKKMSPPCISIEPPAEDEGAARAPAAEGSSTTLRRRTP
SCEAVPHRDPLEPADGAGLDAAAKGERRGQAPCRTEHLTVPNFAFEPLDVGGPSGDLFTD
GGHGAAPEPRPSSSGTTAPPEPRETEPPVPSGDPPEEGRGVHLTVPESPPKRVSPPAVPV
PGDSVDEPV
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagggcgtgcaggcggtcgacgaggtccgcgtgcccctgggcgcgccagccccg
ggcccggcggcagcggcgtccccggcgagccctggggccccggggccagaggcggagcgg
gggtcggggcccagtgcgtcgccccccgagagtccggcggccgagcgcggcgcggagctg
ggcgccgacgaggagcagcccgtcccgtacccggcgctggcggccaccgtcttcttctgt
ctcgggcagaccacgcggccgcgcagctggtgtctccggctggtctgtaacccgtggttc
gagcacgtcagcatgctggtcatcatgctcaactgcgtgaccctgggcatgttccggccc
tgcgaggacgtcgagtgccgctccgagcgctgcggcatcctggaggcctttgacgacttc
atcttcgccttcttcgcggtggagatggtcatcaagatgatcgccctggggctgtttggg
cagaagtgctacctgggagacacgtggaacaggctggacttcttcatcgtcatggcgggt
atgatggagtactccttggacggacacaacgtgagcctctcggccatccgaactgtgcgc
gtgctgcggccccttcgtgccatcaaccgtgtgcccagcatgcggatcctggtcacgctg
ctgctggacacactgcccatgctcggcaacgtcctcctgctctgcttctttgtcttcttc
atcttcggcatcgtgggcgtccagctttgggccggcctgctgcgcaaccgctgcttcctg
gacagcaccttcgccaggaacagcaatctcagcttcctgcggccgtactaccagccagag
gagggcgaggaaaacccgttcatctgctcctctcgtcgggacaacggcatgcagaagtgc
tcgcacatccccagccgccgcgagctgcgcgtggagtgcactctgggttgggaggcctac
gggcagccgcaggccgagggcgccggtggcacgggtcaccacacctgcatcaactggaac
cagtactacaacgtgtgccgttcgggcgactccaacccgcacaacggggccatcagcttc
gacaatattggctacgcctggatcgccatcttccaggtgatcacgctggagggctgggtg
gacatcatgtactacgtcatggacgcccactccttctacaacttcatctacttcatcttg
ctcatcatcgtgggttccttcttcatgatcaacctgtgcctggtggtcatcgccacgcag
ttctcagagacgaagcagcgggagaaccagctgatgcgggagcagcgggctcgctacctg
tccaacgacagcacgctggccagcttctccgagccgggcagctgctacgaggagctcctc
cggtacgtgggccacgtgtgccggaagctaaagcgccggggcctgcgcctctacgcccgc
tggcagagccgctggcgcaagaaggcggaccccggcggcgccgtgcgcggccgggactca
gggcggcggccgcggcgggcgggcgggcgcaccgcctccgtccaccacctcgtgtaccac
caccaccaccaccaccaccaccactaccacttcagccacggcagcccccgccgaccaggc
cccgagccgggggctggtgacgccaggctggtgcgggccggcgggccggcctcgcccggg
cgcgggccccctgacgccgagtcggtgcacagcgtgtaccacgccgactgccacgtggag
gggccgcaggagagggcccgcgtggcgcacgccgcagccaccgctgccgccgggctcaag
ctggccgcggggctgggagccatgaactaccccaccatcctgccctcggccacaggcact
ggcaaaggcggcctcgggcccaaggggaagcggcctggtggccccccgggagctgggggg
cacagccccctgaggctgagcagcccggatccctgcgagaagatccagcacctggtcggg
gagcatggactgggccagacccccagccgcctgtcgggcctgagtgtgccgtgcccgctg
cccagcccccaggcaggcacgctgacctgtgagctgagcagctgcccgtactgcaccagc
gccctggaggaccccgagctggagttcagcgactcgggcagtggagactcagacagcaac
ggggtctacgagttcacgcaggacgtgcggcacggggaccaccgcgaccccatgcagtcg
ccccccgaggcggaggcaccaggcgcgggtggcacacggcggagggggccacggcgggcg
gcggcgggcgagcagggcgggctgggccgcatctgggcctccttcagtggcaagctgcgc
cgcatcgtggacagcaagtatttcaaccggggcatcatggtggccatcctcaccaacacg
ctgagcatgggcgtcgagtaccacgagcagcctgacgagctgaccaacgccctggagatc
agcaacattgtgttcacaagcatgtttgccttggagatgctgttgaagctgctggcctgc
ggcccactgggctacatccggaacccttacaacatctttgacggcatcatcgtggtcatc
agcgtgtgggagatcatcgggcaagcggacggcgggctgtcggtgctgcgcaccttccgg
ctgctgcgggtgctcaagctggtgcgcttcatgcccgctctgcggcgccagctggtggtg
ctcatgaagaccatggacaacgtggccactttctgcatgctgctcatgcttttcatcttc
atcttcagcattcttggcatgcatctcttcggctgcaaattcagcctgaaaacagatacc
ggagacacagtccccgaccgaaagaactttgattccctgctatgggccattgtcacggtg
ttccagatcctcacccaggaggactggaacgtcgtcctgtacaatggcatggcctccacg
tcctcctgggccgccctgtacttcgtggccctcatgacctttggcaactatgtgctcttc
aacctgctggtggccatcctggtggagggtttccaggccgagggcgatgccaccaggtcc
gacacagatgaagacaagacatccacccacttggaggaagacttggacaagttccgagac
ctcagggccacagagatgaagatgtactcgctggcggtgacacccaacgggcacctggag
ggccggggcagcctgccccctccccttatcatgcgcacggcagccacgcccatgcccacc
cccaagagctccccacacctggacgcggcccctgggcccctggactcgcgccgtggcagc
agcagctccatggaccctcagctaggggaccagaaatctctgtctagcctccgaagctcg
ccctgtgccccctggggccccaacagtgcctggagcagccggcgctccagctggaacagc
ctgggccgcgcacccagcctcaagcgcaggagccagtgtggggagcgagagtcgctgctc
tccggtgagggcaggggcagcggcagcactgacgaggaagccgaggacggccggcccggg
gcgggggcctcgccgggcacacgggccacgccgctgcggcgcgccgagtccctggaccac
cgcagcacgctggatctgcggcccccacggccagccaccctgctgcccaccaagacccac
gactgcaacgggcaggtgctggccctgcccagcgagttcttcctgcgcatcgacagccac
aaggaggatccggccgagtttgacgacgacgtggaggacagctgctgcttacggctgcag
aaggtgctggagccgcacaagccagagtgctgccggagccgtgagccctgggccctgtat
ctcttctccccgcagaacaggttccgtgtctcctgccaaaagatcattgctcacaagatg
ttcgatcacatcgtcctcgtcttcatcttcctcaactgcatcaccattgccctggagagg
cccgacattgacccgggcagcaccgagcgcgttttcctcagcgtctccaactacatcttc
acagcgatcttcgtggtggagatgatggtgaaggtggtggccctgggcctcgtctcgggt
gagcacgcctacctgcagagcagctggaacatactggacggggtgctggtcctggtgtcc
ttggtggacatcgtcgtggccatggcctcggctggcggcgccaagatcctgggcatcctg
cgtgtgctgcgcctgctgcggaccctgcggcctctgagggtcatcagccgtgcgccgggc
ctcaaactggtggtggagactctgatatcgtccctcaggcccatcgggaacatcgtcctc
atctgctgtgccttcttcatcatcttcggcatcctcggggtgcagctcttcaaggggaag
ttttactactgcgagggcgccgacaccaggaacatttccaccaaggccgagtgcagggcc
gcacactaccgttgggtgcgacgcaagtacaacttcgacaacctgggccaggcgctgatg
tcgctgttcgtgctctcgtccaaggacggctgggtgaacatcatgtacgacgggctggac
gccgtgggcgtggaccagcagcccgtgcccaaccacaacccatggatgctgctctacttc
atctccttcctgctcatcgtcagcttcttcgtgctcaacatgttcgtgggcgtcgtggtg
gagaacttccacaagtgccggcagcaccaggaggccgaggaggcgcggcggcgcgaggag
aagcggcagcgtcgcctggagaggaagcgcaggagcactttccccaacccagaggcccag
cgccggccctactatgcagactactcgcccacccgccgctccatccacactctgtgcacc
agccactacctggacctcttcatcaccttcatcatcggcgtcaacgtcatcaccatgtcc
atggagcactacaaccagcccaaggctctggacgaggccctcaagtactgcaattacgtg
ttcaccatcgtctttgtcgtggaggccgtgctgaagttggtggcctttgggtttcggagg
ttcttcaaggacaggtggaaccagctggacctggccatcgtcctgctgtccatcatgggc
atcacgctggaggagatcgagatgaacgcagcactgcccatcaaccccaccatcatccga
atcatgcgtgtcctccgcatcgcccgcgtcctgaagctgctcaagatggccacgggcatg
cgggccctgctggacacggtggtccaggcactgccccaggtagggaacctcggcctgctt
ttcatgctcctgttttttatctatgctgccctgggagtggagctgttcgggaggctcgaa
tgcagtgaggacaacccctgcgagggcctgagcagacacgccaccttctctaacttcggc
atggccttcctcacgctgttccgcgtgtccaccggggacaactggaatgggatcatgaag
gacacgctacgtgagtgcgcccgcgaggacaagcactgcctcacctacttgccggccatc
tcgcccatctacttcgtcaccttcgtgctggtggcccagttcgtgctggtcaacgtggtg
gtggccgtgctcatgaagcacctggaggagagcaacaaggaggcccgcgaggacgccgag
ctggacgcggagctcgagatggagatggcgcaggggtcccccgcccggcccaggcccgcg
gccccgcagagccccggcgcctcgccggactcccccaatgtgctggtcgtgcgcaaggtg
tcggtgtccaggatgctctcgctgcccaacgacagctacatgttccggcccgtggtgcct
gcggcagccgctcacccccacccgctacaggaggtggagatggagacctacgcgggcgct
tcgggccgggtcaccaccgcccactcgccgcctgtggagtcctgcgcctccctccaggtc
ccttctgctgtgtcctccccggccaggggtggcgacaccctctgtgccctgccccctcgg
ggtgcagcccgcttgcctagtgtcggccggctgctctgcagacaggaggccgttcgcacg
gagtccctggaagggcaggttgatggcaccggggccagcagcccatactggggagagtcc
ggcgggaaaacccccgtgaggcaggcatccctggggccttccatgcggtccccgccccgg
tccccgcggcccgccagcatccgcacccgcaagcacacttctggacagcattgcctctcc
agccggccgccggccccaggcggggaggaggcagaggccccagacccagccgatgaggag
gtcagccacatcaccagctctgcccgcagtccttcggcctcgcccactgcccgtgggatg
gtgggcggcgagccagatctgcacaggctctacagcgtggacgcccggggcttcctggac
cagccgggccgggtggacgagcagaggcgaccctcgggggagccgggcgtcggagacagc
cgtccagaggccggggaggcaaagccccgggccctggaggccgagctggccctgggggca
cgcaggaagaagaagatgagccccccctgcatctccatagagccccccgcggaggacgag
ggtgcggccagggcccctgcggcggagggcagcagcaccaccctgcggcggcgaacccca
tcctgcgaggctgtgccccacagagaccccctggagcccgcagacggcgcagggctggac
gctgctgccaagggggagcggcggggccaggccccctgccgcacagaacacctgactgtc
ccgaacttcgcctttgagccgctggacgtggggggccccagtggggacctgttcacggat
gggggccatggggctgccccagaacccagaccctcctcttcaggcaccacagcccctcct
gaaccccgggagacggagcccccagtgccctcaggagaccccccagaggaggggcggggg
gtgcacctcaccgtccctgagagccctccgaagagagtgtcccccccggctgtgccagtc
ccgggtgacagcgtggatgagcccgtgtag
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