Cervus canadensis (wapiti): 122435222
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Entry
122435222 CDS
T07554
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04020
Calcium signaling pathway
ccad04024
cAMP signaling pathway
ccad04080
Neuroactive ligand-receptor interaction
ccad04713
Circadian entrainment
ccad04720
Long-term potentiation
ccad04724
Glutamatergic synapse
ccad05010
Alzheimer disease
ccad05014
Amyotrophic lateral sclerosis
ccad05017
Spinocerebellar ataxia
ccad05020
Prion disease
ccad05022
Pathways of neurodegeneration - multiple diseases
ccad05030
Cocaine addiction
ccad05031
Amphetamine addiction
ccad05033
Nicotine addiction
ccad05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122435222 (GRIN2C)
04024 cAMP signaling pathway
122435222 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122435222 (GRIN2C)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
122435222 (GRIN2C)
04720 Long-term potentiation
122435222 (GRIN2C)
09159 Environmental adaptation
04713 Circadian entrainment
122435222 (GRIN2C)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
122435222 (GRIN2C)
05014 Amyotrophic lateral sclerosis
122435222 (GRIN2C)
05017 Spinocerebellar ataxia
122435222 (GRIN2C)
05020 Prion disease
122435222 (GRIN2C)
05022 Pathways of neurodegeneration - multiple diseases
122435222 (GRIN2C)
09165 Substance dependence
05030 Cocaine addiction
122435222 (GRIN2C)
05031 Amphetamine addiction
122435222 (GRIN2C)
05033 Nicotine addiction
122435222 (GRIN2C)
05034 Alcoholism
122435222 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccad04040
]
122435222 (GRIN2C)
Ion channels [BR:
ccad04040
]
Ligand-gated channels
Glutamate (ionotropic)
122435222 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
122435222
NCBI-ProteinID:
XP_043315207
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All DBs
Position
1:complement(6484723..6502037)
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AA seq
1227 aa
AA seq
DB search
MRVALGPALLLTSLLGAWAGLGPGQGEQTVTVAVVFGSSGSPQAQARTHLTPQSFLDLPL
EIQPLTVGVNNTNPSSLLTQICGLLGAARVHGIVFEDNVGTEAVAQILDFISSQTHVPIL
SISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLE
GVRAVADASYLSWRLLDVLTLELGPGGARAHTQRLLRQLDAPVLVAYCSREEAEVLFAEA
AQAGLVGPGHVWLVPSLALGSTDTSPAAFPVGLISVVTESWRLSLRQKVRDGVAILALGA
HGYRRQHGALPAPAGDCRAHPGPLSPAREAFYRHLLNVTWEGRDFSFSPGGYLVQPTMVV
IALNRHRLWEMVGRWDHGILHMKYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVESPD
PGTGGCVPNTVPCRRQSNHSFSSGDAAPYTKLCCKGFCIDILKKLAKVVRFSYDLYLVTN
GKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNG
TVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTSGKRLGGPSFTIG
KSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTV
SGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKM
GKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQF
LGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVY
WKLRHSVPNTSRLDFLLAFSRGIYSCFSGVQSLASPVRPPSPDLTAGSAQASVLKMLQAA
RDMVTTAGVSSSLDRATRTIESWGGCRPAPPPPACPGPRPPTPGPPREPSPTGWRPPDED
RAALGRRAAQPSGRPPTPRPALPDVSRASGRRAWEARWLLRPGRRGRRFSASERRAHPER
PLSPERGHYSSFPRADRCGRPFLPLFPEPPEPEDLPLLGPEQLARREALLRAAWAQGSRP
RHASLPSSVAEAFTRPSSGPARCARPACGRLIPAQSMRLPSYREACQDGLWAGPPAWAHR
PHACLHAHAHLPLCWGVVCPHLPPCAAHGPWLPGAWGPPGHRHRTLGLSPEYSGGGELEG
VSRAACGTHDFPPPCTWRRISSLESEV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgagggtggccctgggcccggccctgctgcttacctcactcctcggggcctgggcaggg
ctgggccctgggcagggagagcagactgtgacggtggccgtggtgtttggcagctcgggg
tccccgcaggcccaggcccgtacccacctcaccccccagagcttcctggacttgcccctg
gagatccagccgctgaccgtgggcgtcaacaacaccaaccccagcagtcttctcacccag
atctgcgggctcctgggggctgcccgggtccatggcatcgtctttgaggacaacgtgggc
accgaggccgtggcccagatcctggacttcatctcctcccagacccacgtgccgatcctc
agcatcagtgggggctctgctgtggtcctcactcccaaggaaccgggctccgccttcctg
cagctgggcgtgtccctggagcagcagctgcaggtgctgttcaaggtgctggaggagtac
gactggagcgccttcgccgtgatcaccagcctgcaccccggccacgcgctcttcctcgag
ggcgtgcgcgccgtcgccgacgccagctacctgagttggcggctgctggacgtgcttacg
ttggagctgggccccggcggggcgcgcgcgcacacccagcgcctgctgcgccagctcgac
gccccggtgctggtggcctactgctcgcgcgaggaggccgaggtgctcttcgctgaggcg
gcgcaggctggcctggtggggcctgggcacgtgtggctggtgcccagcctggcgctgggc
agcaccgacacatcccctgccgccttccccgtgggcctcatcagcgttgtcaccgagagc
tggcgcctcagcctgcgccagaaggtccgagacggcgtggccatcctggccctgggcgcc
cacggctaccggcgccagcacggcgccctgcccgccccggctggggactgccgcgcccac
cctgggcccctcagccctgcccgggaggccttctacaggcacctcctgaatgtcacctgg
gagggccgggacttttccttcagccctggtgggtacctggtccagcccaccatggtggtg
attgccctcaaccggcaccgcctctgggagatggtggggcgctgggaccacggcatcctc
cacatgaagtaccccgtgtggcctcgctacagtgcctccctgcagcccgtggtggacagc
cggcacctgaccgtggccacgctggaggagcgaccctttgtcatcgtggagagccccgac
cctggcacaggcggctgcgtgcccaacactgtgccctgccgccggcagagcaaccacagc
ttcagcagcggtgacgcggccccctacaccaagctctgctgtaagggcttctgcatcgac
atcctcaagaagctggccaaggtggtcaggttctcctacgacctgtacctggtgaccaac
ggcaagcatggcaagcgggtgcgcggcgtgtggaacggcatgatcggggaggtgtactac
aagcgggcggacatggccatcggctccctcaccatcaacgaggaacgctccgagattgtg
gacttctccgtgcccttcgtggagacaggcatcagcgtgatggtggcccgcagcaatggc
accgtctccccctcggccttcctggagccctacagccctgccgtctgggtcatgatgttt
gtcatgtgcctgacggtcgtggccatcactgtcttcatgttcgagtacttcagccccgtc
agctacaaccagaacctcaccagcggcaagaggttggggggcccatccttcaccatcggc
aagtccgtgtggctgctctgggcgctggtcttcaacaactcggtgcccatcgagaacccc
cggggcaccaccagcaagatcatggtgctggtgtgggccttctttgccgtcatcttcctc
gccagctacactgccaacctggccgctttcatgatccaggagcagtacatcgacaccgtg
tccggactcagtgataagaagttccagcggccacaggatcagtacccacccttccgcttt
ggcaccgtgcccaacggcagcacggagcggaacatccgcagcaactaccgcgacatgcac
acccacatggtcaagttcaaccagcgctcggtggaggacgcgctgaccagcctcaagatg
gggaagctggatgccttcatctatgacgccgctgtcctcaactacatggcgggcaaggac
gagggctgcaagctggtcaccatcggctctggcaaggtctttgccaccaccggctatggc
atcgccatgcagaaggactcccactggaagcgggccatagacctggcgctcctacagttc
ctgggagacggggagacccagaagctggagacggtgtggctctcggggatctgccagaat
gagaagaacgaggtgatgagcagcaagctggacatcgacaacatggcgggcgtcttctat
atgctgcttgtggccatggggctggccctgctggtcttcgcctgggagcacctggtctac
tggaagctgcgacactctgtgcccaacacgtcccggctggacttcctgctggccttcagc
aggggcatctacagctgcttcagcggcgtgcagagcctggccagccccgtgcgcccgccc
agcccggacctcaccgccggctcggcccaggccagcgtgctcaagatgctgcaggcggcg
cgcgacatggtgaccacggcgggggtgagcagctccctggaccgcgccacgcgcaccatc
gagagctggggcggctgtcgccctgcgcccccgccgcccgcctgccccggcccgcggccg
cccaccccgggtcctccccgcgagccgagccctacgggctggaggccgccggacgaggac
cgcgccgcactggggcgcagggccgcgcagccctcgggccgccccccgacgccccggccc
gcccttcccgacgtctcccgggcgtcgggccggcgggcctgggaggcgcggtggctgctg
cggccggggcggcgcgggcggcgcttctcggcctccgagcggcgtgcgcacccggagcgt
cccctgtcgcccgagcgcggccactacagctccttccctcgcgccgaccggtgcggacgc
cccttcctgccgctcttcccggagcccccggagcccgaggacctgccgctgctcgggccg
gagcagctggcccggcgggaggccctcctgcgcgcggcatgggcccaggggtcgcgcccg
cgccacgcttccctgcccagctcagtggccgaagccttcactcggcccagttccgggccc
gcccgctgtgcccgcccggcctgcgggcgcttgatacccgcgcagtccatgcggctgccg
tcgtaccgcgaggcctgccaggacgggctgtgggccgggccccccgcctgggcgcacaga
ccgcacgcctgcctccacgcccatgcccacctgccgctctgctggggggttgtctgccct
cacctcccaccctgtgctgcccatggcccctggctccctggggcctgggggcctccggga
cacagacacaggactctggggctgagcccagaatacagcggcggtggggaactggaaggg
gtcagcagggcggcctgtgggacacacgactttccgccgccttgcacctggaggcggatc
tccagcttggagtcagaagtatga
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