Cervus canadensis (wapiti): 122436633
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Entry
122436633 CDS
T07554
Name
(RefSeq) vascular cell adhesion protein 1-like isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04064
NF-kappa B signaling pathway
ccad04514
Cell adhesion molecules
ccad04668
TNF signaling pathway
ccad04670
Leukocyte transendothelial migration
ccad04933
AGE-RAGE signaling pathway in diabetic complications
ccad05143
African trypanosomiasis
ccad05144
Malaria
ccad05417
Lipid and atherosclerosis
ccad05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
122436633
04668 TNF signaling pathway
122436633
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122436633
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
122436633
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
122436633
05143 African trypanosomiasis
122436633
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
122436633
05418 Fluid shear stress and atherosclerosis
122436633
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
122436633
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ccad04090
]
122436633
04091 Lectins [BR:
ccad04091
]
122436633
CD molecules [BR:
ccad04090
]
Proteins
122436633
Lectins [BR:
ccad04091
]
I-type lectins (Siglecs)
122436633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set
I-set
ig
Ig_2
V-set
C2-set_2
Ig_4
Ig_6
Ig_5
ICAM1_3_5_D2
ICAM_N
Adhes-Ig_like
C1-set
Receptor_2B4
TrkA_C
HTH_34
Motif
Other DBs
NCBI-GeneID:
122436633
NCBI-ProteinID:
XP_043316452
LinkDB
All DBs
Position
2:complement(40764471..40787522)
Genome browser
AA seq
735 aa
AA seq
DB search
MFRKMFVIFGASDILWMVFAVSQASQIDIFPSEPEIFAQIGHSVSLTCSTASCESPSFSW
RTQMDSPLNGKVRNEGTTSMLIMDPVSFGNEHQYLCTVICGAIKLEKAIQVKIYSFSKDP
EIHFSSPPEVGKQVTVTCSVPDVYPFERLEIELFKGNRSMKIQDFLEPSEEKAQETKSLE
VTFSPTDEDIGKALVCQATLHIYDDDSPPKVRKTTKQLEVYISPKDTAISVDPSTRLQEG
DSVTMTCTSAGLPAPRILWSKKLDNGNLQLLSENATLTLISMRAEDSGIYVCEGDNPVGK
DRKEVELIVQEKNFTVEILPGPQIAAQIGDSVVLTCDVRDCDSPSFSWRTQIDSPLKGEV
RSEGSKSTLTLSPVSPENEHFYLCTVMCGQKKLEKRIQVKPYSFSSDPEIEMSGPLVSGN
PVTVSCKVPNVYPFDRLEIELLKGESIMMNKIFSKDVSKKALETKSLEKTFIPTTEDTGN
VLVCLARLSIDEMEFEPKQRQSTQTLYVNVAPRDTTILVSPSSILEEGSSVNMTCASDGL
PAPKILWHRQLSNGDLQLISENATLTFTSTKMEDSGIYVCEGINQAGRSRKEVELIIQVA
PKDIQLTAFPSESVKEGDTVIISCTCGNVPPTLIILKKKAETGYTVLQSTDGAYTIHRAQ
LEDAGVYQCESKNEVGSQLRSLTLDVKGRESYKDYFSPGLLVLYCASSLIIPAIGMIIYF
ARRANMTGSYSLVEA
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtttaggaagatgtttgtgatctttggagcctcagatatactttggatggtgtttgca
gtttctcaagcttcccaaatcgacatattcccaagtgaacccgaaatttttgctcagatt
ggtcactctgtttcactgacttgcagcacagcaagctgtgagtccccatcattttcttgg
agaactcagatggacagtccactgaacgggaaggtgagaaatgaggggaccacatccatg
ctgatcatggatcctgttagtttcgggaatgaacaccagtacctgtgcacagtgatttgc
ggagctataaaactggagaaagcaatccaagtgaagatctactctttctctaaggatcca
gagattcatttcagtagccccccagaggttgggaagcaagtcacagtcacgtgctcggtg
cctgatgtttacccatttgaaaggctggagatagagttgttcaaagggaaccgttccatg
aaaatacaggattttctggagccttcagaagaaaaggcccaggaaacaaagagcttggaa
gtgaccttctcgcctactgatgaggatattgggaaagctcttgtttgtcaagctacatta
cacatttatgatgatgattctccacccaaagtaaggaaaactaccaaacaactggaagtc
tacatctcacccaaagacacagctatatctgtggatccatccacaaggctgcaggaaggc
gactctgtgacaatgacatgtaccagtgcaggtctaccagctccccggattctctggagc
aagaaattagacaatgggaatctacagctcctttctgagaatgcaactctcactttgatt
tctatgagggcagaagattctgggatttatgtgtgtgaaggagataaccctgttgggaaa
gacagaaaagaggtggaattaattgttcaagagaaaaactttactgttgagatcttgcct
ggaccccagattgctgctcagattggagactcagtcgtgttgacctgtgatgtcagggac
tgcgattccccatctttctcttggagaacccagatagacagccctctgaaaggggaggtg
aggagcgagggctccaagtccacgttgacactgagccctgtgagtcctgagaacgaacat
ttctacctgtgcactgtgatgtgtgggcaaaagaaactggaaaaaagaatccaggtgaag
ccttactccttctctagtgatccagaaattgaaatgagtggtccattagtgagtggaaac
ccagtcactgtaagctgcaaggttcctaatgtatatccttttgaccggctggagattgaa
ttgttaaaaggagagagtattatgatgaataaaatcttctcaaaagatgtaagtaagaaa
gccctagagaccaagagtttggaaaagaccttcatccccaccactgaagatactggaaat
gttcttgtttgtctggctcggttatcaattgatgaaatggaatttgaacccaaacaaagg
cagagtacacaaacactttatgttaatgttgctcccagggatacaaccattttggtcagt
ccctcctccatcctggaggaaggtagttctgtgaatatgacatgtgctagcgatggcctt
ccagctcccaaaatcctgtggcacaggcagttaagtaatggggatctacagcttatttct
gagaatgcaactctcaccttcacgtctacaaaaatggaagattctggtatttatgtctgt
gaaggcattaaccaggctggaagaagcagaaaagaagtcgaattaattatccaagttgct
ccaaaagatatacaacttacagcttttccctctgagagtgtcaaggaaggagacactgtc
attatctcctgtacatgtggaaatgttcccccaactttgataattctgaagaaaaaagca
gagactggctacacagtgctacagtctacagatggtgcatataccattcacagggctcag
ttagaggatgcgggagtataccaatgtgaatccaaaaatgaagttggctcacagctaaga
agcctaacacttgatgttaaaggaagagaaagttacaaggactatttttctcctggactt
ttggtactctattgtgcatcctccttaataatacctgccattggaatgattatttacttt
gctagaagagctaacatgacagggtcgtacagtcttgtagaagcatag
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