Cervus canadensis (wapiti): 122439454
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Entry
122439454 CDS
T07554
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad00310
Lysine degradation
ccad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122439454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122439454
03036 Chromosome and associated proteins [BR:
ccad03036
]
122439454
Enzymes [BR:
ccad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
122439454
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122439454
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
122439454
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
122439454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SSXRD
zf-C2H2_5
zf-C2H2_6
SET
Zn_ribbon_SprT
zf_PR_Knuckle
Zn-ribbon_8
zf-C2H2_12
zf_C2H2_ZHX
Motif
Other DBs
NCBI-GeneID:
122439454
NCBI-ProteinID:
XP_043320418
LinkDB
All DBs
Position
4:complement(259607..273269)
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AA seq
644 aa
AA seq
DB search
MGEWEKIRYRNMKRNYEALIAIGFKATRPDFMHHRRQVIKPQVDDTEDSDEEWTPRQQGK
PSSMAFRVEHSKHQKRMSRAPLSKESSLKELPGAAKSLKTSGSKQAQKPVPHHRKARTPG
QHPRHKVELRRKETGVKRYCLRERKGHVYQEVSEPQDDDYLYCEECQNFFIDSCAAHGPP
TFVKDCAVEKGHANRSALTLPPGLSIRLSGIPDAGLGVWNEASDLPLGLHFGPYEGQITD
DEEAANSGYAWLITKRRNCYEYVDGKDTSWANWMRYVNCARDDEEQNLVAFQYHGQIFYR
TCQVVRPGCELLVWYGDEYGQDLGIKRNSRGKSELAAGREPKPKIHPCASCSLAFSSQKF
LSQHIKRSHPSQTVLSPSERDLLQPEDPCPGNQNQQYSDPHSPSDKPESPEAKDRPQQLL
KSIRLKRISRASSYSPGVQMGGSGVHERMREEPSTSQKLNPEDTGPLLMGAGISGIMRVM
YRECGQGSRDRSSLSTHERTHTGEKPYVCGECGRSFSQKSVLIRHQRTHTGEKPYVCGEC
GRSFIQKSDFIRHQRTHTGEKPYVCRECGRSFSRKSLLITHQRTHTGEKPYVCGECGGSF
SQKSVLITHQRTHTGEKPYICGECGRNFSQKTHLIRHQRTHTGE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatgggaaaaaatccgatataggaatatgaaaagaaactacgaagcgctgatt
gctataggtttcaaagccactcgaccggatttcatgcatcaccgcaggcaggtcatcaag
ccccaggtagatgacactgaggattctgatgaagaatggacaccaaggcagcaaggtaaa
ccttcttcgatggccttcagagtggagcacagtaaacaccagaagagaatgtccagggca
ccattaagtaaggaatctagtttgaaggaattgccaggagcagcaaaatcgctaaagaca
agtggctccaagcaggctcagaaaccagtgccccatcacagaaaagcaagaacccctgga
cagcaccccagacataaagtcgaactcagaagaaaggagactggagtgaagaggtactgt
ctacgagaaagaaagggccatgtgtaccaagaggtcagcgagccccaggatgatgactac
ctctattgtgaggagtgtcagaacttcttcatcgacagctgtgctgcccatgggccccca
acctttgtaaaggactgtgcagtggaaaaggggcatgccaatcgctcagccctcactctg
ccccctgggttaagcatcagactgtcgggcatccctgacgctgggcttggagtgtggaac
gaggcgtccgatctgccgctgggcctgcactttggcccctatgagggccagatcacagac
gatgaagaggccgccaacagtggatatgcctggctgatcaccaaaaggaggaactgctac
gagtatgtggatggaaaggacacgtcttgggccaactggatgaggtatgtgaactgtgcc
cgcgacgacgaggagcagaacctggtggccttccagtatcacgggcagatcttctaccga
acctgccaggtggtcaggccgggctgtgagctgctggtctggtacggggacgagtatggt
caggaccttggcatcaagcggaacagcagggggaagagtgagctcgcggccgggagagaa
ccgaagcccaagatccacccatgtgcctcctgctctctggccttctccagtcagaaattc
ctcagccaacacatcaaacgcagtcacccctctcagaccgtcctgagcccatctgaaaga
gacctcctccaaccagaggatccctgcccaggcaatcaaaatcagcaatattcagatcca
cacagcccgagcgacaaacctgagagtccggaggccaaggacaggccccaacaattgctg
aaaagcataaggctgaagaggatttcaagggcctcttcctactcacccggagtacaaatg
gggggttctggggtgcatgagagaatgagagaagagcccagcacaagccagaaactgaat
ccagaggacacaggcccattgctcatgggggcagggatctcagggattatgagagtcatg
tacagagagtgtgggcaaggctccagggacaggtcaagtctcagcacacacgagaggaca
cacacaggggagaagccctatgtttgcggggagtgtgggcgaagcttcagtcagaagtca
gtcctcatcagacaccagaggacacacacaggggagaagccctatgtttgtggggagtgt
gggcgaagcttcattcagaagtcagatttcatcagacaccagaggacacacacaggggag
aagccctatgtttgcagggagtgtgggcgaagcttcagtcggaagtcactcctcatcacc
caccagaggacacacacaggggagaagccatatgtttgcggggagtgtgggggaagcttc
agtcagaagtcagtcctcatcacccaccagaggacacacacaggggagaagccctatatt
tgtggggagtgtgggcgaaacttcagtcagaagacccatctcatcagacaccagaggaca
cacacaggggagtag
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