Cervus canadensis (wapiti): 122446342
Help
Entry
122446342 CDS
T07554
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03020
RNA polymerase
ccad04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122446342 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
122446342 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccad03021
]
122446342 (POLR3A)
Enzymes [BR:
ccad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122446342 (POLR3A)
Transcription machinery [BR:
ccad03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
122446342 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
122446342
NCBI-ProteinID:
XP_043332359
LinkDB
All DBs
Position
8:60005646..60052974
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEEMRQQAHIQVVSKNLYSQDNNHAPLLYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKTCCHIMLSQE
EKKQFLDYLKRPGLTYLQKRGLKKKISDKCRKKNACHHCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPIVSSFLQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDIPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPEVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIRVRLPPPTILKPVTLWTGKQI
FSVILRPSDDNPVRANLRTKGKQYCGRGEDLCVNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIKAVFPCRSEPALSKNELLLSAESIMKKNEFLC
CQDSFLQEIKKFIKEVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQIEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQFLKEDLPKVV
VQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTRTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKANRDPSPPRRPLIFD
TSEFHIPLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttccgggagacagatgtggccaagaaaataagccacatctgtttt
ggaatgaagtcagccgaggagatgcgccagcaggctcacatccaggttgtgagtaagaac
ctgtacagccaggacaacaaccatgccccactgctctacggggtgcttgaccacaggatg
ggtacaagtgagaaggaccgtccttgtgaaacctgtgggaagaacttggccgactgtctg
ggccactatgggtacattgacttggaattgccatgttttcacgtggggtacttccgagca
gttatcggcatcttacagatgatctgtaaaacctgctgccacatcatgctgtcccaggag
gagaagaagcagtttctggattatctaaagaggcccggcctgacctacctccagaagcga
gggctgaagaagaaaatctctgacaagtgccggaagaagaacgcgtgccatcactgtggc
gccttcaacggtactgtcaagaaatgcggcttactgaagataatccacgagaagtacaag
actaacaagaaagtggtagatcccatcgtatcaagtttccttcagtcttttgaaaccgcc
atagagcataataaagaagtagagcctctcctgggaagggcacaggaaaacttgaatccc
ttagtagttttgaatttatttaaacgaatcccagctgaagacatccctctacttctgatg
aatccggaagctggaaagccctccgatctgattctcacacgactcttagtgccccctttg
tgtatcagaccctctgtcgtgagcgatttgaagtctggcaccaatgaagacgatctgaca
atgaagttgacagaaatcattttcctaaatgacgtcattaaaaagcatcggatatcagga
gctaagacccagatgatcatggaagactgggacttcctgcagctgcagtgcgccctctac
attaacagcgagctctcaggcattcccctcaatatggcacccaagaaatggaccagaggg
tttgtccagcgcctgaagggaaagcagggtcgattcagaggcaatctctcaggaaagaga
gtagatttttctggcagaacagtcatctcacctgaccccaacctccgaattgatgaggta
gctgtgccagttcacgtggccaaaattctgacatttcctgagaaggtaaacaaagcaaac
atcaactttttgaggaaactggttcgaaatggccctgaagttcacccaggagccaatttc
attcagcagagacacacgcagatgaaaaggtttctgaaatacggaaacagagaaaagatg
gcccaggagctcaagttcggggacattgtggagaggcacctcatagatggagacgtggtc
ctgttcaaccggcagccctcgctgcacaaattgagcatcatggcacacctggccagggtc
aagccccaccggactttcagatttaatgagtgtgtctgtacaccctacaatgcagatttt
gatggagatgaaatgaaccttcatcttcctcaaacagaagaagctaaagcagaagccctt
gttctcatggggactaaagcaaaccttgtaacaccaagaaatggagaaccactaattgct
gctattcaggattttctgacaggtgcctatctcctcactcttaaggacactttctttgac
cgagccaaagcttgtcagatcatcgcttcaatactggtgggcaaggatgagaaaattaga
gttcgtctcccaccccccacaatactaaagcctgtcaccctgtggacgggaaagcagatc
ttcagcgtcatcctcagacccagcgatgacaatccagtgagggccaacctccgaaccaag
ggcaagcagtactgcggcagaggagaggacctctgtgtcaatgactcctatgtcacaatc
cagaacagcgagctgatgagtggcagcatggacaaaggcacactggggtcaggatccaag
aacaacattttttacattttgctgcgagactgggggcagaatgaagctgccgacgcgatg
tcacggcttgccaggctggctcccgtctacttgtctaaccgtggattctcaatcgggatt
ggtgacgtcacacctggccaagggctgctgaaggccaagtatgagttgctgaatgctggc
tacaaaaaatgcgatgagtacatcgaagccctgaacacaggcaagctgcagcagcagccc
ggctgcaccgccgaggagactctggaggctttgatcctgaaggagctgtccgtgatccgt
gaccacgcaggtagcgcctgcctccgggagctggacaagagcaacagccccctcaccatg
gcgctgtgtggttccaaaggttccttcattaacatatcacagatgattgcctgtgtggga
cagcaagctatcagtggctctcgagtgccagatggctttgaaaacaggtccctgcctcac
tttgaaaaacactcaaagctcccagctgccaaaggctttgtggctaatagcttttattcc
ggtttgacaccaaccgagtttttcttccacacgatggctggccgggaaggtctggttgac
acggctgtgaagacagctgaaacaggatatatgcagagaaggctcgtcaagtccctggaa
gatctttgctcacagtatgacctgacagtccgcagctctacgggcgatatcatccagttc
atttacgggggagacggcttagatcctgcagccatggaggggaaagatgagcccttagag
tttaaaagggttctggacaacatcaaagcagtcttcccgtgccggagcgagcctgctctc
agtaagaacgagctgctcctcagcgccgagtccatcatgaagaagaacgagtttctctgc
tgccaggacagcttcctgcaggagataaaaaagtttatcaaggaggtttctgagaagatc
aagaagaccagagataaatacggcatcaacgacaatggcacaacagagccccgtgtgctg
taccagttggaccggatcaccccaacccaaatagagaagtttctggagacatgtagggac
aagtacatgagggcacagatggagccaggttccgcggtgggtgcactctgtgctcagagc
attggcgagccaggcacccagatgaccctgaagactttccacttcgcaggcgtggcctcc
atgaacatcaccctgggcgtgccccgcatcaaagagatcatcaacgcctccaaggccatc
agcactcccatcatcacagcacagctggacaaggacgacgatgcagattacgctcgtctg
gtgaaagggagaattgagaaaaccctcttgggagagatttcagagtacattgaagaagtg
tttcttcctgatgattgcttcattctcgtcaagctctccctagaacggatcagacttctg
aggctggaagtgaacgctgagacggtgaggtactccatctgcatgtccaagctgcgcgtg
aagcccggcgacgtggccgtgcacggggaggcagtggtgtgcgtcaccccccgagagaac
agcaagagctccatgtactacgtgctgcagttcctgaaagaggatctccccaaggtggtg
gtgcagggcatcccggaggtgtcccgagctgtcatccacatcgatgagcagagcgggaag
gagaagtacaagctcctggtggagggtgataacctgcgggccgtcatggccacccacggc
gtgaagggcacccggaccacctccaacaacacatacgaggtggagaaaaccctgggcatc
gaagctgcccggacaactatcatcaacgagatccagtatacgatggtcaaccacggcatg
agcatcgaccggcggcacgtgatgctgctgtccgatctcatgacctacaagggtgaagtc
ctgggcatcaccaggtttggcctggccaagatgaaggagagcgtgctgatgctggcctcg
tttgagaagacggccgaccacctctttgatgctgcctactttgggcagaaggactctgtg
tgtggggtatctgaatgcatcatcatggggatccccatgaacattggcactggactcttc
aagctgctccacaaggccaacagggaccccagccctcccaggaggcccctcatcttcgac
acgagcgaattccacatcccccttgtcacctag
DBGET
integrated database retrieval system
