Cervus canadensis (wapiti): 122448023
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Entry
122448023 CDS
T07554
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04721
Synaptic vesicle cycle
ccad04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
122448023 (SLC6A4)
04721 Synaptic vesicle cycle
122448023 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccad02000
]
122448023 (SLC6A4)
Transporters [BR:
ccad02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122448023 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
122448023
NCBI-ProteinID:
XP_043334824
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Position
1:39029927..39064130
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AA seq
630 aa
AA seq
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METTPLNSQKELSAYKDGEDCQENGVLQKGVPAPGDRAESGQISNGYSAVPNPGAEDDTQ
HSIPAATTTLVAEVHSAGRETWSKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWTKICPIFKGIGYAICLIAFYIASYYNTIM
AWALYYLISSFTEQLPWTSCKNSWNTGNCTNYFSEDNITWMLHSTSPAEEFYTRHVLQIH
QSKGLQDLGGLSWQLVLCIMFIFTIIYFSIWKGVKTSGKVVWVTATFPYIILLILLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQD
ALVTSAVNCMTSFVSGFVIFTVLGYMAEMRKEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIVFFLMLITLGLDSTFAGLEGVITAMLDEFPHIWAKRREWFVLGVVITCFFGSLVT
LTFGGAYVVKLLEEFATGPAVLTVALIEAVAVFWFYGINQFCSDVKEMLGFSPGWFWKIC
WVAISPLFLLFIICSFLMSPPQLRLFQYDYPQWSIILGYCIGTSSFICIPTYITYRLIVT
PGTLKERIIKGVTPETPTEIPCGDIRLNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaccccgttaaattcccagaaggagctgtcagcgtataaggatggagaagat
tgtcaggaaaatggggttctacagaagggtgtccctgcccctggggatagggcagagtcc
ggccagatctccaatgggtactcagcagttccgaaccctggcgcggaagacgacactcag
cactccatcccggctgccaccaccaccctggtggctgaggttcattccgcagggcgggag
acctggagcaagaaggtggatttcctcctttctgtcattggctatgctgtggacctgggc
aacgtctggcgctttccctacatttgttaccagaacggagggggggcgttccttctcccc
tacactatcatggccatttttggggggatcccgctcttctacatggaactcgcactgggg
cagtaccaccgaaatggatgcatttccatatggacgaaaatctgcccaattttcaaaggg
ataggttacgccatctgcctcatcgccttctacatcgcctcctactacaacaccatcatg
gcctgggccctctactacctcatctcctccttcacggagcagctgccctggaccagctgc
aagaactcctggaacactggcaactgcaccaactacttctctgaggataacatcacctgg
atgctccactcaacatcccctgcagaagaattttacacgcggcacgtcctgcagatccac
cagtcgaaggggctccaggacctggggggcctcagttggcaacttgtcctgtgcatcatg
ttcatcttcaccattatctactttagcatctggaaaggtgttaaaacatctggcaaggtg
gtttgggtgacagccaccttcccttacatcattcttttgatcctgctggtgaggggggcc
accctccctggagcctggaggggagttctcttctatttgaaacccaactggcagaaactc
ctagagacaggggtgtgggtggatgcggccgcccagatcttcttctctctcggccctggc
tttggggtcctactggcttttgcgagctacaacaaattccacaacaactgttaccaagac
gccctggtgaccagtgcggtgaattgcatgacgagcttcgtttcaggatttgtcatcttc
acggtgctggggtatatggctgagatgaggaaagaagatgtgtctgaggtggccaaagat
gcaggccccagcctcctgttcatcacatatgcagaagccatagccaacatgccggcatcc
acattctttgccatcgtcttcttcctgatgttaatcaccctgggcttggacagcacgttt
gcaggtttggagggggtgatcacagccatgctggatgagtttccacacatctgggccaag
cgccgggagtggtttgtgcttggcgtggtcattacctgcttctttggctccctggtcacc
ttgactttcggtggggcctacgtggtgaagctgctggaggagtttgccacgggacctgca
gtgctcaccgtggccctgatcgaagcagttgctgtgttttggttctacggcatcaatcag
ttctgcagtgatgtgaaggaaatgcttggtttcagccctggatggttttggaagatctgc
tgggtagccatcagtcctctgtttctcctgttcatcatctgcagttttttgatgagccca
ccacagctacgacttttccagtatgattatcctcagtggagcatcatcctgggttactgc
ataggaacctcatctttcatctgcatccccacatatataacttaccggctgattgttact
ccagggacacttaaggagcgtattattaaaggtgtcaccccagaaacaccaacagagatt
ccctgtggggacatccgcttgaatgctgtgtaa
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