Cervus canadensis (wapiti): 122448960
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Entry
122448960 CDS
T07554
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad00310
Lysine degradation
ccad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122448960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122448960
03036 Chromosome and associated proteins [BR:
ccad03036
]
122448960
Enzymes [BR:
ccad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
122448960
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122448960
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
122448960
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
122448960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
PRDM2_PR
zf-C2H2
zf-C2H2_4
SSXRD
zf-C2H2_5
zf-C2H2_jaz
zf-C2H2_6
SET
KRAB
Zn_ribbon_SprT
Zn_ribbon_recom
zf_C2H2_ZHX
Phage_F
zf_PR_Knuckle
Motif
Other DBs
NCBI-GeneID:
122448960
NCBI-ProteinID:
XP_043336547
LinkDB
All DBs
Position
10:82254249..82275321
Genome browser
AA seq
723 aa
AA seq
DB search
MRPNRSPEESTEGDPGRTEWKPTVRDAFKDISVYFSKEQWEEMGEWEKIRYRNMKRNYEA
LMAIGFRATRPDFMHHRRQVVKPQVDDTEDSDEEWTPRQQGKPSLMAFRVDHSKHQKRMS
RAPLSKESSLKELPGAAKSLKTSGSKQAQKPVPHHRKARTPGQHPRQKVELRRKETGVRR
YSLRERKGHVYQEVSEPQDDDYLYCEECQNFFIDSCAAHGPPTFVKDCAVEKGHANRSAL
TLPPGLSIRLSGIPDAGLGVWNEASDLPLGLHFGPYEGQITDDEEAAKSGYAWLITKGRN
CYEYVDGKDTSWANWMRYVNCARDDEEQNLVAFQYHGQIFYRTCQVVRPGCELLVWYGDE
YGQDLGIKRDSRGKSELAAGREPKPKIHPCASCSLAFSSQKFLSQHTQRSHPSQTLLRPS
ERDLLQPEDPCPGNQNQRYSDPHSPSDKPEGHKTKARPQPLLKSIRLKRISRASSYSTGG
QMGGSGVHERMKDEPSTSQKLNPEDTGTLLTGAGFSGIMRVTHGECGQGSKDRSSLSTHE
RTHTGEKPYVCGECGRSFSQKSDFIRHQRTHTGEKRYVCGECGRSFSQKSVLITHERTHT
GEKPYVCGECGRSFSQKAHLISHERTHTGEKPYVCGECGRSFSKNFNLITHQRTHTGEKP
YVCGECGRRFSHKSVLIRHQRTHTGEKPHVCGECGRTFSRKSVLIRHQRTHTGEKSYVCR
ECE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgaacaggtctccagaggagagcactgagggagatcccgggagaacagagtgg
aagcccacggtgagagatgctttcaaagacatctccgtatacttctccaaggaacaatgg
gaagagatgggagaatgggaaaaaatccgatataggaatatgaaaagaaactacgaagcg
ctgatggctataggtttcagagccactcgaccggatttcatgcatcaccgcaggcaggtc
gtcaaaccccaggtagatgacactgaggattctgatgaagaatggacaccaaggcagcaa
ggtaaaccttctttgatggccttcagagtggaccacagtaaacaccagaagagaatgtcc
agggcaccattaagtaaggaatctagtttgaaggaattgccgggagcagcaaaatcgctg
aagacaagtggctccaagcaggctcagaaaccagtgccccatcacagaaaagcaaggacc
cctggacagcaccccagacaaaaagtcgaactcagaagaaaggagactggagtgaggagg
tacagtctacgggaaagaaagggccacgtgtaccaagaggtcagcgagccccaggatgac
gactacctctattgtgaggagtgtcagaacttcttcatcgacagctgtgctgcccatggg
cccccaacctttgtaaaggactgtgcagtggaaaaggggcatgccaaccgctcagccctc
actctgccccctgggttgagcatcagactgtcgggcatccctgacgctgggcttggagtg
tggaacgaggcgtccgatctgccgctgggcctgcactttggcccctacgagggccagatc
acagacgatgaagaggccgccaagagtggatacgcctggctgatcaccaaagggaggaac
tgctatgagtatgtggatggaaaggacacgtcttgggccaactggatgaggtatgtgaac
tgtgcccgggacgacgaggagcagaacctggtggccttccagtatcacgggcagatcttc
taccgaacctgccaggtggtcaggccgggctgtgagctgctggtctggtacggggacgag
tatggtcaggaccttggcatcaagcgggacagcagggggaagagtgagctcgcggccggg
agagaaccgaagcccaagatccacccatgtgcctcctgctctctcgccttctccagtcag
aaattcctcagccaacacacccaacgcagtcacccctctcagaccctcctgagaccatct
gaaagagacctcctccaaccagaggatccctgcccaggcaatcaaaatcagcgatattca
gatccacacagcccgagcgacaaacctgagggtcacaagaccaaggccaggccccaaccg
ttgttgaaaagcataaggctgaagaggatttcaagggcctcttcctactcaaccggagga
caaatggggggttctggggtgcatgagagaatgaaagacgagcccagcacaagccagaaa
ctgaatccagaggacacaggcacattactcacgggggcagggttctcggggattatgaga
gtcacacatggagagtgtgggcaaggctccaaggacaggtcaagtctcagcacacacgag
aggacacacacaggggagaagccctatgtttgtggggagtgtgggcgaagcttcagtcag
aagtcagatttcatcagacaccagaggacacacacaggggagaagcgctatgtttgcggg
gagtgtgggcgaagcttcagtcagaagtcagtcctcatcacacacgagaggacacacaca
ggggagaagccctatgtttgcggggagtgtgggcgaagcttcagtcagaaggctcatctc
atctcacacgagaggacacacacaggggagaagccctatgtttgcggggagtgtgggcga
agcttcagtaagaacttcaacctcatcacacaccagaggacacacacaggggagaagccc
tatgtttgcggggagtgtgggcgacgcttcagtcacaagtctgttctcatcagacaccag
aggacacacacaggggagaagccccatgtttgtggggagtgtgggcgaaccttcagtcgg
aagtctgtcctcatcagacaccagaggacacacacaggggagaagtcctatgtttgtagg
gagtgtgagtga
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integrated database retrieval system
