Cyanistes caeruleus (blue tit): 111923736
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Entry
111923736 CDS
T05602
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccae03016
]
111923736 (CDKAL1)
Enzymes [BR:
ccae01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
111923736 (CDKAL1)
Transfer RNA biogenesis [BR:
ccae03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
111923736 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
111923736
NCBI-ProteinID:
XP_023775406
LinkDB
All DBs
Position
2
AA seq
582 aa
AA seq
DB search
MPAACESVLEDIEDIVSAEDLKPHDRQFVRRNVFPKVRKRNSQKIVQTDDEPPSDSIIPG
VQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDNSAEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQEYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFRQVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVELYRFPSLFINQFYPRPGTPAAKMPQVPAAVKKQRTKDLSQ
LFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLLMGKMVEVNIYEA
GKHFMKGQPVSDARVHTASIRRPLAKGEVSGLTEEFRRSPQNGTNWKAQPSAEIPVKTQL
SSCMALQLPWQQEGGGLKILSVSLALLAVLVMFYYGGMKTEL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgagtcagtgcttgaggatatcgaagacatcgtgtcagcagaagat
ttgaagccacacgatcggcagtttgtgagaaggaatgtttttcccaaagtgcgaaaacgc
aactcccaaaaaatcgttcagacagatgatgagcctccaagtgacagcattattcctggt
gttcagaaaatctggattcgtacatggggatgttctcacaataattcagatggtgaatac
atggctgggcagctggctgcatatggatacaaaattacagataactctgctgaagcagat
ttatggttgctgaacagttgtacagtaaaaaatcctgctgaggaccacttcagaaactcc
atcaagaaagcccaagaagggaagaagaaagttgttctagcaggctgtgtaccacaagcc
caacctcgccaggagtacctgaaaggcttgagtattataggggttcagcagatagatcgt
gtagtagaagttgtggaggaaactattaaaggtcattctgtgagactgctgggtcagaaa
aaggataatggaaaacgtttggggggagcccgactggatttgccaaagattaggaagaat
ccactgatagaaataatttccatcaatacagggtgtctcaatgcatgtacctactgtaaa
actaagcatgccagaggagatctagcaagttaccctattgaagaactggtggacagagcc
aaacagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggcagagacattggcacagacctccccacgcttctgtggaagctggttgaagttatt
cctgagggagctatgctgaggcttggcatgacaaaccctccctatattttagagcatctg
gaggaaatggccaagattctcaatcatccaagagtatatgcttttctgcacataccagtc
cagtcagcctctgacagtgtgctcatggacatgaaaagagaatactgtgtggcagacttc
agacaagtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacata
atttgtggttttccaggagagacagatgaagattttcaagaaactatgaaacttgtagaa
ctttacaggtttccaagcttgtttattaatcagttctacccacgtccaggaaccccagct
gcaaaaatgcctcaagttccagctgcagtgaaaaagcagagaacaaaggatctctcccag
ctgtttcattcatacaatccatatgatcataaggttggtgagaggcagagagttctggta
acagaagaatcctttgactccaattactacgttgctcacaatcctttctatgagcaggtt
cttgtaccaaaggatcctctgttaatgggcaagatggtagaagtgaatatttatgaagct
gggaaacatttcatgaaggggcagccagtatcagatgccagagttcacactgcatccatc
agaagaccattagcaaaaggagaagtttctggtttaacagaggagttcagacgttcacca
cagaatggcacaaactggaaagcacagccttctgctgagatcccagtgaaaacacagctc
agctcctgcatggctttgcagctcccatggcaacaagagggaggtggactgaagatcctg
tctgtcagcctggctctactggcagttcttgttatgttttactacggaggaatgaaaaca
gaactgtga
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