Cyanistes caeruleus (blue tit): 111936695
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Entry
111936695 CDS
T05602
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03030
DNA replication
ccae03410
Base excision repair
ccae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111936695 (POLE)
03410 Base excision repair
111936695 (POLE)
03420 Nucleotide excision repair
111936695 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccae03032
]
111936695 (POLE)
03400 DNA repair and recombination proteins [BR:
ccae03400
]
111936695 (POLE)
Enzymes [BR:
ccae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111936695 (POLE)
DNA replication proteins [BR:
ccae03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
111936695 (POLE)
DNA repair and recombination proteins [BR:
ccae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
111936695 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
111936695
NCBI-ProteinID:
XP_023793572
LinkDB
All DBs
Position
15
AA seq
2291 aa
AA seq
DB search
MGLRDGAEPEAARWGRRPGGPREPEDGAGSSRDDATALSAFKRLERAQRTDRLDALFGFE
RPAEPGERTGWLINMHPTEVLDEDRRSVSAVDYYFIQEDGSRFKVALPYKPYFYIATQKG
CEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVKVRKEIS
PAVRKNREQDQANDVYTTMLSSALSGGSLSTDEEGASKKIANQMENIVDMREYDVPYHVR
LSIDLKIHVAHWYNVRYRGSTYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDADTD
QIMMISYMIDGQGYLITNREIVSENIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHV
QETKPTIIVTYNGDFFDWPFVEARAAAHGINMYQEIGFQKDSQGEYKASQCIHMDCLRWV
KRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATDEPQTLATYSVSDAVATYYMYM
KYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDG
HVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLVQHVEKTLQHAIEEEEGLPLD
QVTNFQEVCDEIKAKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATC
AACDFNKPGANCQRRMMWQWRGEFMPASRSEYHRIQQQLESEKFPPLFPDGPPRAFHELS
REEQAKYEKRRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGL
HKVWKKKLSAAVETGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEM
AGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNIKKPKVTIS
YPGAMLNNLVKEGFTNDQYQELQDPASLTYITRSENSIFFEVDGPYLAMILPASKEEGKK
LKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVAD
YWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKD
AGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVCKHYLRKWLKSPSLQDFNIRAILDWD
YYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFISEG
KKQVLANRPVEGTPSSQVGDIEDFGAVKIPQPLVPITNKRKRIPAAEESQQLSQDLELSQ
SWREILGPPPPFGTTKEEHLVWLRFHQKKWELQARQRQERRKRRRLEDGGVAAGGGVVRD
APSKGLSSYLRRTARSILDLPWQVVQIAETSQPGLFRLWAVIGSDLHCIKLSIPRVFYVN
QRVPKPEEGAAYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYET
QVPLLFRALIHLGCVCMVSRQLVRHLAGREAETFNIEHLEMCSLAQFTYLEPGSIRHIYL
YHSSKGSKALLGLFIPSQGKAAVFVLDKVRSNQMPNLTTLFSVEREALLEKVGKELLPLD
KHTFEVRAETDPKAIYKGVQRLLLGYKDERRGPTLLAVQSNWDLKQLASGIPIIEEFPLV
PIRLVDDISYSVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGS
DLFFSRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLEL
DIQSLAVNTVLQSHHVNDMEGGSSMSISFDVIQQASLEDMVTGNQAANIPASYDETALCS
NTFRILKSMVVSWVKEITQYHNVYADNQVIHFYRWLHSPSSLLYDPALHRTLHNMMKKLF
LQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSR
CWEFLLWMDPANYGGIKGKVDSRIHYGEKDTSKRQALEEEEESEEEEEAREEEEEEGEPD
VQELLENSWNIAQFLPQAGSCQSYFLMIISAYIVAVYHNMKEELRCNTPGSTPIKRRNTS
QVSQETSGDLRAMSGMITFSQDYVANELTQSFFTITQKIQKKMAGSQNATEPSDMFPVLP
GSYLPLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSEAAQFRDPCRSY
VLPEVICRNCNFCRDLDLCKDPTLSQDRLVLPGWLCPNCHVQYNTDAIETALVEALQKKL
MAFVLQDLVCKKCHGVKETHMPVYCSCAGDFALTISSQAFMDHVSVFQNIARHYGMAYLL
ETIEWLLHTNL
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atgggactgagggacggtgccgagcccgaggcagcgcggtggggacggcggccaggtggg
ccccgggagccggaggacggcgcggggtccagccgtgacgatgccaccgcgctgtctgca
ttcaagcgcctggagcgggcacagcgaacggaccgtctggacgcgctgttcggcttcgag
cggcccgcggagcccggagagcggacgggctggctcatcaacatgcacccgacggaggtg
ctggatgaggaccggcggtcagtgagtgcagtggactactacttcatccaggaggatggg
agtcgcttcaaggtggccctaccctacaagccctacttctacattgctacccagaagggc
tgtgagcgggaagtgtcctccttcctctccaagaagttccaagggaagattgcaaagctg
gaaactgtccccaaagaagacttggacctgccaaaccacttggtgggcctgaagaggaac
tatatcaagctctccttcaacacagtggaggacttggtgaaggtgcggaaggagatctct
cctgctgtgaggaaaaacagggagcaggaccaggcgaatgatgtctacacgaccatgctg
tcaagtgctctgagtgggggcagtctaagcacagatgaggaaggagcctccaaaaaaatt
gccaaccagatggaaaacattgtggacatgcgggagtatgatgtcccctaccacgttcgc
ctttccatcgacctgaagatccatgtggctcactggtacaacgtgcgataccgaggcagt
acctacccccccgaaatcacccgccgagatgaccttgtggaacgaccggatcctgttgtt
cttgcctttgatattgaaacaaccaaactccctttgaagtttcctgatgcagacacagac
cagatcatgatgatctcctacatgattgatgggcagggctacctgatcacaaacagggag
attgtctcagagaatattgaagactttgagtttactcccaaacctgagtatgagggtcca
ttttgtgtctttaatgaaccagatgaggctcatttaatccagagatggtttgaacatgtc
caggagaccaaacccaccatcattgtcacatacaatggagacttctttgactggcccttt
gtggaagcaagagcagcagctcatggaattaatatgtatcaggaaattgggtttcagaag
gatagccagggagagtacaaagcatcccagtgcatccacatggactgtctgaggtgggtg
aagagagacagttacctcccagtgggaagtcacaacctgaaagcagcagctaaagcaaaa
ctgggttatgatccagtggagctggaccctgaggagatgtgccggatggccacagacgaa
cctcagacactggccacctactcagtgtccgatgctgttgctacttactacatgtatatg
aagtatgtgcatcccttcatttttgccttgtgtaccatcattcccatggagcctgatgag
gtattaagaaaaggatctgggacactgtgcgaggcactgctgatggttcaggcctaccat
gccaacatcatcttcccaaacaagcaggagcaggaattcaacaaacttacagaagatggg
catgtgctggactcagagacctacgtgggaggccatgtggaggcactggaatctggggtc
ttccgcagtgatattccctgccgcttcaaaatgaatcctgctgccttcgacttcctggtg
cagcatgtggagaagaccctgcagcacgccattgaggaagaggagggtctgcccttggat
caggtcaccaactttcaggaggtttgtgatgaaatcaaggccaaactgaattccctgaag
gatgttcccaacagaattgagtgtcctcttatctatcatctggatgtgggggccatgtac
cccaacatcattctgaccaacaggttgcagccctcagccatggtggatgaggccacttgt
gctgcctgtgacttcaacaaaccgggtgccaactgtcagcgtcggatgatgtggcagtgg
agaggagagttcatgcctgccagccgcagtgagtaccaccgcatccagcagcagctggag
tcagaaaagttccctcccttgttccctgatggaccaccccgtgccttccacgagctctcc
cgggaagaacaagccaagtatgagaaaaggcgtctggcagattactgccgcaaggcatac
aagaagatccatgtcaccaaggtggaggagcgagtcactaccatctgccaaagagaaaac
tctttctatgtggacacggtgcgagcattccgggaccgccgatatgagttcaagggactg
cacaaggtgtggaagaagaagctgtctgcagcagtggagacaggagatgcctctgaagtg
aaacgctgcaagaacatggagatcctctatgactccctgcagctggctcacaagtgcatc
ctcaactccttctatggatatgtcatgcggaaaggagctcgctggtattccatggaaatg
gctggcattgtctgcttcacgggggcaaatatcatcacccaggccagagagctgatcgag
cagattgggagacctctagaactggataccgatgggatttggtgtgtccttcccaacagc
ttcccagagaactttgtcatcaagtcaaccaatatcaagaagccaaaagtgactatctct
tacccaggtgccatgctgaacaacctggtgaaggaaggcttcacaaatgatcagtaccag
gaactgcaggatccagcctcactcacctatatcacacgctcagagaacagcatctttttt
gaagtggatggtccatacctggccatgatccttccagcctccaaagaagagggcaagaag
ctgaagaaaaggtatgcggtgttcaacgaggatgggtccctggctgagctgaaggggttt
gaggtgaaacgccggggagaactgcagctggtgaagatattccagtcatctgtgtttgaa
gcctttctaaaaggcagcaccttggaggaggtctacgcttctgtggccaaggtggctgat
tactggctggatgtgctctacagcaaggctgccaacatgcctgattctgagctgtttgag
ctcatctcagagaaccgatctatgtcacgcaaactggaggactacggggagcagaagtcc
acctccatcagcactgctaagcgcctggcagagtttttgggggaccagatggtgaaggat
gcagggctgagctgtcgcttcatcatttccaagaaaccagaagggtctccggtcactgag
agagccatcccccttgccatcttccaagctgagcccagcgtgtgcaagcactatctccga
aaatggctgaagagcccctcactgcaggacttcaacatccgtgcgatcctggactgggac
tactacattgagagattgggcagcaccatccagaaaatcatcaccattccagcagccctg
cagcaggtaaagaacccagttccacgggtccgacacccagactggcttcacaagaaactc
ctggagaagaatgatgtgtacaaacagaaaaaaatcaatgagctcttcatttcagaaggc
aaaaaacaggttcttgccaatcggcctgtggaggggacacccagctcacaggtgggtgac
atagaggattttggggctgtcaagatccctcagccactggttcccattacaaataagcgg
aagcgtatccctgcagcagaggaaagccagcagctgtcccaggacctggagctgtcccag
tcctggcgggagattctgggcccacctccaccctttggcaccaccaaggaagagcatttg
gtctggctgcgcttccaccagaagaagtgggagctgcaggctcggcagcggcaggagcgg
cggaagaggaggcggctggaggatggtggggtggcggcaggtggaggcgtggttcgcgat
gccccttccaaagggctgagcagttacctgcgccggacagcgcgcagcatcctggacttg
ccctggcaggttgtgcagattgctgagaccagccagcctgggctcttccggctgtgggcg
gtgataggaagtgacctgcactgcatcaagctgagcatcccccgtgtcttctatgtcaac
cagcgtgtcccaaagcctgaggagggagcagcctacaggaaggtaaacaggatcttgccc
cgttcaaacttagtttacaacttgtacgaatactctgttcctgaagacatgtaccaagag
cacatcaacgaaatcaacgcagacctctctgctccagacatcgagggagtgtatgagaca
caggtgccactgctcttccgtgccctgatccacctgggctgcgtgtgcatggtcagcagg
cagcttgttcgacacctggcagggcgagaggctgaaaccttcaacattgagcacctggag
atgtgctcactggcccagttcacttacctggagccaggaagcattcgccacatctacctg
taccacagctccaagggcagcaaggcactcctgggcctcttcatcccctcacagggcaag
gctgctgtcttcgtgctggacaaggtacgcagcaaccagatgccaaacctcaccaccttg
ttctcggtggagcgtgaggctctgctagagaaggtgggcaaggagctgttgcccctggac
aaacacacttttgaggtgcgtgctgagactgaccctaaggccatctacaaaggtgtccag
cggctgctcttgggctacaaggatgaacgccggggccccacgttgctggctgtgcagtcc
aactgggacctgaaacagctggcaagtgggatccccatcattgaggagttccccttggtc
cccatccggctggtagatgacatcagttactcagtcctggactggcagcgccatgctgcc
cgccgcatgattcgccactacctcaacctggacacctgcctctcccaggcttttgagatg
agcaggtactaccacatccccattgggaacctccctgatgacatctccacctttggctct
gacctattcttttcacgccaccttcgtcgtcacaaccacctgttgtggctgtcccctacg
gcccgacctgacctgggggggaaagaggccgatgacaaccgcctggtcatggagtttgat
gagagggcctcagttgagatcaacaatcctggctgctactccacagtgtgtctggagctg
gacatccagagcctggctgtgaacacagtgttgcagtcccaccacgtgaatgacatggaa
ggaggctccagcatgagcattagcttcgatgtgattcagcaggcatccttggaggacatg
gtgacagggaaccaagctgccaacatcccagccagctatgatgagactgccctctgctcc
aacactttcaggattctgaagagcatggtggtgagctgggtgaaggagattacacagtac
cacaacgtctatgcagacaaccaggtcattcacttttaccgctggcttcactctccttcc
tccctgctctatgacccggcactgcaccgcacactccacaacatgatgaagaagcttttc
ctgcagctggtggccgagttcaaacgtctgggctcctctgtggtctatgccaacttcaac
cgcatcatcctgtgcaccaagaagcggcgcattgaggatgccatcagctacatggagtat
atcatcaacagcatccattccaaggagatcttccattctttgaccatctcattctcccgc
tgctgggagtttttgctctggatggacccagcaaattatggaggtatcaagggaaaagtg
gattctcgcatccactatggagagaaggacaccagcaagaggcaggcattggaggaggag
gaggagagcgaggaagaggaggaagcaagggaagaagaggaggaggaaggggagccagat
gtgcaggagctgctggagaacagctggaacattgcgcagttcctgccccaggctggctcc
tgccagagttacttcttgatgatcatatcagcatacatcgtagctgtgtaccacaacatg
aaggaggaactgcggtgtaacacccctgggagtacccccatcaagaggaggaacaccagc
caggtgtcccaggagacttcgggggacctgagggccatgtctggcatgatcaccttctca
caagattacgtggccaatgagcttacccaaagcttcttcaccatcacccagaagatccag
aagaagatggctggttcccagaatgccacagagccctcagacatgttcccagtcctgcct
ggctcctaccttccactcaacaacccagctctggagttcatcaaatatgtttgcaaggtc
ctctccctggatgcaaacataaccaaccaggtgaacaaactacgccgggacctgctgcgc
cttattgaagtgggagagttctcagaagcagcccagtttcgggacccttgccgctcctat
gtgcttcctgaagtcatctgcaggaactgcaacttctgcagggatctggacctgtgcaaa
gaccctaccctttcccaggacaggttggtgctgcctggctggctctgccccaattgccat
gtgcagtacaatactgatgccattgagacagcactggtggaagccctgcagaagaagctg
atggctttcgttcttcaggacctggtgtgcaaaaagtgtcatggtgtgaaggagacacac
atgcctgtgtactgcagctgtgctggagacttcgccctcaccatttcctcccaggccttc
atggaccatgtcagtgtcttccagaacatcgcccggcactatggcatggcctacctgctg
gaaaccattgagtggctgctgcacaccaacctctag
DBGET
integrated database retrieval system
