Cyanistes caeruleus (blue tit): 111936905
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Entry
111936905 CDS
T05602
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04020
Calcium signaling pathway
ccae04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111936905 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111936905 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccae04040
]
111936905 (GRIN1)
Ion channels [BR:
ccae04040
]
Ligand-gated channels
Glutamate (ionotropic)
111936905 (GRIN1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
111936905
NCBI-ProteinID:
XP_023793798
LinkDB
All DBs
Position
17
AA seq
729 aa
AA seq
DB search
MLSLVLAVPGAGHGPSNAEPSPLPSAGVIGLQLINGKNESAHISDAVAVVAQAVHDLFEK
ENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVEFNEDGDRKFANYSIMNLQN
RKLVQVGIYNGSNVLTNDRKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQADG
TCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIRLAGVMNFTYEVHLVA
DGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTI
LVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDA
LTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRP
EERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQA
VRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSH
ENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRH
KDARRKQMQLAFAAVNVWRKNLQRELRRRSKCIPEHALRTSGIHFGYPRAVAEPDLVTPS
PVGKVTLIGTKAIGEDSLPAPGAERGRAPRPAAPAPWRLVLPACANQQYHPTDITGQLNL
SDPSVSTVV
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcctcgtgctcgctgtccccggagcggggcacggtcccagcaatgctgagccc
tcccctctgccctcggcaggagtgatcggcctgcagctcatcaatggcaagaacgagtca
gcccacatcagtgacgctgtggccgtggtggcccaggccgtgcatgacctgtttgagaag
gagaatatcacagacccaccgcggggctgcgtgggcaacaccaacatctggaaaacagga
cccctttttaagagggtgttgatgtcctccaagtactcagagggtgtcaccggccgggtg
gagttcaacgaggacggggacaggaagtttgccaactacagcatcatgaacctgcagaat
cggaaactggtccaggttgggatttacaacggcagcaatgtcctgaccaacgacaggaag
atcatctggccagggggggaaacggagaaacctcaaggctatcagatgtcaaccaagttg
aagattgtgaccatccaccaagagccttttgtgtatgtgaagcccactcaggcagatggg
acgtgcagggaggaattcaccatcaatggagatcctgtcaaaaaggtcttctgcactgga
cccaatgagaccatcccaggccgtcccaccgtggcactgtgctgctacggcttctgcatc
gacctgctcatccgcctggcaggggtgatgaacttcacctatgaggttcacctggtggct
gatggtaaatttggtacccaagagcgggtgaacaacagcaacaagaaggagtggaacggg
atgatgggggagctgctgagcggccaagcagacatgatcgtggctcccctcaccatcaac
aacgagcgggctcagtacatcgagttctccaagcccttcaagtaccagggcctcaccatc
ctcgtgaagaaggaaatcccccgcagcaccctggactcgttcatgcagcccttccagagc
acactctggctgctggtggggctgtctgtgcacgtggtggcagtgatgctgtacctgtta
gaccgattcagcccatttggccggttcaaagtaaacagtgaggaggaggaggaagatgcc
ctgactctctcctcagccatgtggttctcctggggagtcctgctgaactctggcattgga
gaaggtgctccccggagtttctctgcccgtatccttggcatggtgtgggctggctttgct
atgatcattgtggcttcatacactgccaacctggcagccttcctggtgttagaccgacct
gaggagaggatcacaggcattaacgacccccggctgcgcaacccctcggataaattcatc
tacgccacggtgaagcagagctccgtggacatctacttccgacggcaggtggagctgagc
accatgtacaggcacatggagaagcacaactacgagagcgctgccgaggccatccaggca
gtgagggacaacaagctccacgccttcatctgggactcggcagtgctggagtttgaggcc
tcccagaagtgtgacctggtgacgacgggggagctcttcttccgctccggcttcgggatc
gggatgcgcaaggacagcccctggaagcagaacgtctccctggccatcctcaagtcccac
gagaacggcttcatggaggatttggacaagacttgggtgaggtatcaagagtgtgattcc
cgtagcaatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtg
gctggaggtattgttgccgggatatttttaatattcatagagatagcttacaaaaggcat
aaggacgcgcggaggaagcagatgcagctggcgttcgcggccgttaatgtgtggaggaaa
aacctgcagagagaactgagaaggaggagcaaatgtatccccgagcatgctctacgcacc
agcgggatacattttggttacccccgtgcggtagcagagccagacctggtcactccgtcc
cccgtcggaaaggtcacactcattggcaccaaagcaattggggaggactcgttgccagcg
cccggcgccgagcgcggccgggccccccggcccgcggcccccgcaccatggcggctggtg
ctcccagcctgcgccaaccagcagtatcaccccaccgacatcactggccagctcaacctc
tccgacccctcagtcagcactgtggtgtga
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