Clavibacter californiensis: FGD68_14810
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Entry
FGD68_14810 CDS
T08592
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
ccaf
Clavibacter californiensis
Pathway
ccaf00190
Oxidative phosphorylation
ccaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccaf00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
FGD68_14810
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGD68_14810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaf03019
]
FGD68_14810
Enzymes [BR:
ccaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
FGD68_14810
Messenger RNA biogenesis [BR:
ccaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FGD68_14810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
UKF80030
LinkDB
All DBs
Position
3086459..3088642
Genome browser
AA seq
727 aa
AA seq
DB search
MDSETYIGDAKAVAESLDDFDDEDELLEDDGTLPEGRFLDRELSWLAFNRRVLELAEDPE
LPVLERANFLAIFASNLDEFFMVRVAGLKRRIATGLAVPTNIGRTPAEVLSAINETAYRL
QVRHAAAFNDSVRPALEEHGIRIVRWDSLDEAQQDRLHELFSEQVFPVLMPLAVDPAHPF
PYISGLSLNLSVRIRNPKTNRQEFARIKVPQMLPRFMPLTPDTRSGPIDFIALEDLIANQ
LQTLFPGMEIVEHHVFRVTRNEDVQIEEDETENLIQALEKELLRRRFGPPIRLEISDDMD
AVTLDLLMRELDITEQEVFTLPSPLDLGGLFDLAKLDRPALHYPNNVPTTAVALKPAEDN
SRADIFRSIAQQDILLHHPYESFTTSVQAFLEQAAADPHVLAIKQTLYRTSGDSPIVEAL
IDAAEAGKQVLALVEIKARFDEQANITWARKLEKAGVHVVYGVAGLKTHCKLALVIRQEK
GGVLRHYSHIGTGNYNPKTSRIYEDLGLLTADDVVGKDLTRLFNELSGYGIEKKFKRLLV
APLHLRKGLLKRIAVETQNALDGKPSGIRIKVNSIVDEKIIDALYRASNAGVPVQVWVRG
ICSLTPGQPGLSENIEVRSILGRYLEHSRVFSFVNDGDQATFIGSADMMHRNLDRRVEAL
VRLVDPAHLQEIEDLFDRAMADTTSAWILDSAGEWTRRNKGADGTTLEDLQTAVMGIVSK
RKRRVLR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgagacgtacatcggcgatgcgaaggcggtcgccgaatccctggacgacttc
gatgacgaggacgagctcctcgaggacgacgggaccctccccgaggggcgcttcctcgac
cgggagctgagctggctggcgttcaaccgccgcgtcctcgagctggcggaggatcccgag
ctgcccgtcctcgagcgcgccaacttcctcgccatcttcgcgagcaacctcgacgagttc
ttcatggtccgcgtcgccggcctcaagcgccgcatcgccacgggcctcgccgtccccacg
aacatcggccgcacccccgccgaggtgctctccgccatcaacgagaccgcctaccgcctg
caggtccgccatgcggcggccttcaacgacagcgtccgtccggcgctcgaggagcacggc
atccgcatcgtgcgctgggactcgctcgacgaagcgcagcaggaccgcctgcacgagctc
ttctccgagcaggtgttccccgtgctcatgccgctcgcggtggatcccgcgcacccgttc
ccctacatctcgggcctgtcgctcaacctctcggtgcgcatccgcaatccgaagacgaac
cgccaggagttcgcgcgcatcaaggtgccgcagatgctgccgcgcttcatgccgctcacg
cccgacacgcgctccggccccatcgacttcatcgcgctcgaggacctcatcgcgaaccag
ctccagacgctgttcccgggcatggagatcgtcgagcaccacgtgttccgcgtcacgcgc
aacgaggacgtgcagatcgaggaggacgagaccgagaacctcatccaggccctcgagaag
gagctgctgcgccgccggttcggcccgcccatccgcctcgagatctcggacgacatggac
gcggtcacgctcgacctgctcatgcgcgagctcgacatcaccgagcaggaggtgttcacg
ctgccgtccccgctcgacctcggcggcctgttcgacctcgccaagctcgaccgcccggcg
ctgcactacccgaacaacgtgcccaccacggccgtcgcactgaagcccgccgaggacaac
tcgcgggccgacatcttccgctccatcgcgcagcaggacatcctgctgcaccacccctac
gagtcgttcaccacgagcgtgcaggcgttcctcgagcaggccgccgcggatccgcacgtg
ctcgccatcaagcagacgctctaccgcacgagcggtgacagccccatcgtcgaggcgctc
atcgacgcggccgaggccggcaagcaggtgctcgcgctggtggagatcaaggcccgcttc
gacgagcaggccaacatcacgtgggcgcgcaagctcgagaaggccggggtgcacgtcgtc
tacggcgtcgcgggcctcaagacgcactgcaagctcgcgctcgtcatccgccaggagaag
ggcggggtgctccggcactacagccacatcggcacgggcaactacaaccccaagaccagc
cgcatctacgaggacctcgggctcctcacggcggacgacgtggtgggcaaggacctgacg
cgcctgttcaacgagctctccggctacggcatcgagaagaagttcaagcgcctgctcgtc
gcgccgctgcacctgcggaagggcctgctcaagcgcatcgccgtggagacgcagaacgcg
ctcgacggcaagccgagcggcatccgcatcaaggtcaactccatcgtcgacgagaagatc
atcgacgcgctctaccgggccagcaacgcgggcgtgcccgtgcaggtctgggtgcgcggc
atctgctcgctcacgccagggcagccggggctcagcgagaacatcgaggtgaggtcgatc
ctcgggcgctacctcgagcacagccgcgtgttctcgttcgtcaacgacggcgaccaggcc
accttcatcggcagcgccgacatgatgcaccgcaacctcgaccgccgggtcgaggcgctc
gtgcggctcgtggatcccgcgcacctgcaggagatcgaggacctgttcgaccgcgccatg
gccgacacgacctccgcgtggatcctcgactccgccggcgagtggacgcgccgcaacaag
ggcgcggacggaaccacgctggaggacctgcagaccgcggtgatgggcatcgtgtccaag
cgcaagaggcgcgtgctccgctga
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