Conexivisphaera calida: NAS2_0242
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Entry
NAS2_0242 CDS
T06635
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
ccai
Conexivisphaera calida
Pathway
ccai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NAS2_0242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccai03021
]
NAS2_0242
Enzymes [BR:
ccai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NAS2_0242
Transcription machinery [BR:
ccai03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NAS2_0242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BBE41636
UniProt:
A0A4P2VAW8
LinkDB
All DBs
Position
227341..231156
Genome browser
AA seq
1271 aa
AA seq
DB search
MSSMMFEAPKVVRAIKFGVFLPTEIRKYSVVEITIPETYDEDGLPIPGGLMDNRLGVLEP
GQVCGTCGNPAPECPGHFGHIELAEPVVHASFADDIKQLLTVTCRSCGRLLIPEAEIEAY
RKELEENAPYKPDLGEKIAKEIYAKARKAKICPHCGAKKLEVEFTRPHIFHEIMEDGSAV
RLTPAVIRERLEKITDDDYRLLGYDPSSARPEWFVLQVLPVPPVSMRPSITLESGVRSED
DLTHKLVDIVRTNARVKEAKESGSPPLIMQDLMDLLQYHVTTYFDNEASSIPPAHHRSGR
PLKTLSQRLKGKEGRFRGSLSGKRVDFSARTVISPDPSMDISEVGVPVEVAKKLTVPERV
TPWNIEFLRELVRNGPGKYPGANYIVRPDGVKIRLEFVPDRDAYASSLEVGYVVERHLMN
GDVVLFNRQPSLHRMSIMAHYVRVLPYRTFRLHPAVCPPYNADFDGDEMNLHVPQGEEAR
SEAHELMSVQGQIISPRYGGPIIGAIRDYLSAGYLLTKDDTLLDPQTFAYLAYEGGYTGP
LPEPAVKDPTPMYSGKQLFSLFLPRGFNYVLTSRWAKSMRKRRDVVVRDGQLVSGIIDKA
SIGAEEPDSLLHRIVKDYGNEEARRFLNSVLKVLKEYITDRGFSYGYDDLEIPADVKAQI
KEAVDEAYRKIQQYVDDYMNGRMTPVRGLRLEDVLEQKIMDALGEARDRAGELLERVLPS
NNPGVIMSRTGARGSSLNLGQMMALLGQQAVRGKRIKRGYRHRPLPHFKEGEPSPDAYGF
VKSSFRDGLTPIEFFYHSMAGREGLVDTAVRTQQSGYMQRRLVNAMEHLRVEYDYTVRDP
EGNIIQFTYGEDGIDPAKSDHGEAVNLDRLADTIMLNDDPSEPRATQDEKASILSKYGGD
LNEHVRDKLRSVLMSREMSVKSAEAICSRAIQMIDAARIEPGEAAGIVSAQSIGEPGTQM
TLRTFHFAGVKEKDVTLGLPRLIELVDARKQPSTPVMEIYLDEEHRRDRDKALEVAREIL
FTRVGDIASSVEIDYSTGSVVISLNRGLLEDRGCTVEEVAKALSVGKRKVEYDSDSATIS
VSLESFDITSLYSLRDKVLRTRVKGIAGINRVSLEERDGEWVIVTSGSDLRKVFQIPGVD
PTRTRTNSINEIAMVLGIEAARQALIEEMLSTLEEQGLEVDVRHIMLVADLMTHKGIVQQ
VGRHGVAGTKASILARAAFEITVPTLAEAAAKGETDELRGVTENVIVGGIIPVGTGMVDL
YMSSAGEGGAQ
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccatgatgttcgaggccccgaaggtggtccgggccataaagttcggcgttttc
ctgccgaccgagataaggaagtactcggtcgtcgagataactataccggagacctacgac
gaggacggcctcccgataccgggcggcctcatggataacaggctgggcgtcctcgagcca
ggccaggtctgcggcacctgcggaaatcccgcgccggagtgccccggccacttcggtcac
atagagcttgccgagcccgtggttcacgcgtcgtttgccgacgacataaaacagctcctc
acagtcacctgcaggtcgtgcggtcgcctcctgatcccggaggcagaaatagaggcctac
aggaaggagctggaggagaacgccccgtacaagccggatctgggcgagaagatagctaag
gagatctacgcaaaggccaggaaggccaagatatgtcctcactgcggcgcgaagaagctt
gaggttgagttcacgaggccccatatattccacgagataatggaggatggaagcgcagtg
aggctaactcccgcagtcataagggagcgcctcgagaagataaccgacgatgattatcgt
ctcttgggctacgatccgagctccgcccggcctgaatggttcgtgctgcaggtgcttccc
gtgccgcccgtctccatgaggccctcgataaccctcgagagcggagtgaggtcggaggac
gacctcacgcacaagctggtcgacatagtgaggaccaatgcgcgcgtgaaggaggccaag
gagtccggctctccaccgctcatcatgcaggatctgatggacctactccagtatcacgtg
accacttacttcgacaacgaggcatccagcatacctccagcccatcacaggtcagggcgc
cccctcaagacgctctcccagaggctcaagggcaaggagggccgcttcagggggagcctt
tccggcaagcgcgtggacttctcagccaggaccgtgatatcaccagatccgagcatggat
atatccgaggtgggcgtgccggtcgaggtggcgaagaagctgacagttcccgagcgcgtc
actccatggaacatagagttcctgagggaactcgtgaggaacggtcccgggaagtatccg
ggcgcaaactacatagtgaggccggacggcgtcaagataaggctggagttcgtccccgac
agggatgcctacgccagctccctcgaggtcgggtacgtcgtcgagcgtcacctgatgaac
ggtgacgtcgttctgttcaacaggcagccgtcgctccaccgcatgtcgataatggcgcac
tacgttcgcgtgctcccctaccgcacgttccgcctgcaccctgctgtctgcccgccctac
aacgcagacttcgacggggacgagatgaacctgcacgtaccccagggcgaggaggcgcgc
tcggaggcgcacgagctcatgagcgtgcaggggcagataatatcgcccagatacggcggt
cccataataggtgcgataagggattacctgtccgccggatatctcctcacgaaggacgac
acgctgctggatccgcagaccttcgcgtatctcgcatatgagggaggttacacgggtccc
ctcccggagcctgcggtgaaggatcccacgccgatgtacagcgggaagcagctgttttcg
ctcttcctcccgcgcggattcaattacgtactgacttctaggtgggccaagagcatgaga
aagaggcgcgacgtggtcgtcagggatggccagctagtgtccgggataatcgataaggcg
tcgataggggcggaggagcccgatagtctactccacaggatagtgaaggactacgggaac
gaggaggccaggaggttcctcaactcggtgctcaaggtcctgaaggagtacataactgac
agggggttcagctacggatacgacgatctggagatacccgctgacgtcaaggcgcagata
aaggaggcggtggacgaggcgtaccggaagatacagcaatacgtcgacgactacatgaat
gggcgcatgacgcccgtcagggggctcaggctcgaggacgtgctggagcagaagataatg
gacgcgctgggcgaggccagggatcgcgctggtgagctcctggagcgcgtgctccccagc
aacaatccgggcgtcataatgagcaggaccggcgcgcgcggcagctcgctgaacttgggg
cagatgatggcgctcctgggccagcaggcggtcaggggcaagaggataaagcgcggatat
aggcacaggccgcttcctcacttcaaggagggggagcccagccccgacgcctacggcttc
gtgaagtccagtttcagggacggactgacgccgatagagttcttctatcactccatggct
ggaagggagggtctggtggacaccgcggtcaggacccagcagagcggttacatgcagcgc
aggctcgtgaacgcgatggagcatctgagggtcgagtatgattacaccgtgcgtgatccc
gagggcaatataatccagttcacatacggcgaggatggaatagatccggcgaagagcgat
cacggggaggccgtgaacctagatcgcctcgctgacacgataatgctgaacgacgacccg
agcgagcccagggcgacgcaggacgagaaggcctccatactttcaaagtatggaggggat
ctcaatgagcacgtacgcgacaagctaagatcagttctcatgtccagggagatgagcgtc
aaatccgcggaggcaatatgctcccgcgcgatccagatgatagatgccgccaggatagag
cccggggaggccgccgggatcgtctccgcgcaatccataggtgagccgggaacccagatg
accctcaggacgttccacttcgcaggcgtgaaggagaaggacgtgacacttggattgccc
aggctcatagagctcgtcgacgccagaaagcagccgagcactccggtgatggagatatac
ttggacgaggagcacaggcgtgacagggacaaggcactggaggtggcgcgcgagatactg
ttcacgcgcgtcggagatatagcgtcgagcgtggagattgactactcgacgggatccgtc
gtgatatcgctcaacaggggactcctagaggacagaggctgcacggtggaggaggtagcg
aaggcactcagcgtgggcaagcgcaaggtagaatatgactctgattcagcaacgatatca
gtctcgctcgagagcttcgacataacgtccctctatagcctccgcgacaaggtgttgagg
acccgcgtgaagggaatagctggaataaatcgcgtgagcttggaggagagggacggcgag
tgggtgatagtgacctccggatccgatctcaggaaggtcttccagatacccggcgtggat
cccaccaggacgaggacgaacagtataaacgagatagcgatggtcctggggatagaggcc
gctagacaggcattgatagaggagatgctgagcacgcttgaggaacagggattggaagtc
gacgtgaggcacataatgctggtggcggatctaatgacccacaagggcatagtgcagcag
gtgggcaggcatggggtcgcgggcacaaaggccagcatactggctagggccgcgttcgag
ataaccgtgccgacgttggcggaggccgctgccaagggcgagaccgacgagctcagaggg
gtgaccgagaacgttatagtgggcggaataatccccgttggcacgggaatggtcgaccta
tatatgagctcagccggggagggtggtgcacaatga
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