Cajanus cajan (pigeon pea): 109813015
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Entry
109813015 CDS
T04868
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109813015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109813015
Enzymes [BR:
ccaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109813015
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
109813015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
109813015
NCBI-ProteinID:
XP_020232702
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MVVGLKHDQFSGGNKVQSDPLDDSGFDQRILTAPIKSAVDKFQLLPEFLKVRGLVKQHLD
SFNYFVRTGIRKIVRANNLMVASRYQHIYVRFSNVRIGKPSRTVEGITEELTPQMCRLSD
QTYAAPIYVDVEYTQGSHDNPTKERRPGVVIGSMPIMLRSCCCVLYGRDEAELAKLGECP
LDPGGYFVIKGTEKVILIQEQLSKNRIIIDTDKKKNITASVTCSTEKIKTKTVIVMENEK
LWLQLNQFPKKVPLMVVMKAMGMESDQEVIQMVGRDPRYSLLLLPSIEECTKCKVYTQEQ
ALEYLDSKVKRPMYSNNSAEKEGRAFSVLRDVFLANVPVDQDNFRQKCIYVAVMMRRILD
AILNQDAMDDKDYVGNKRLELSGQLISLLFEDLFKSMTTELKNLTDKLLDKPDKAKNIDI
SKNLVRLGDTISLGLERTLSTGNFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFE
KSRKVSGPRALQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEAPLISLCYYLGV
EDTGRLSAEELHTPDSFLVIFNGLILGKHRRPQRFAAAIRKLRRAGKIGEFVSVYVNDKQ
QCVYLASDGGRVCRPLVIADKGISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENN
ALIALYEGDATPETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFN
QLRRMDSLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKA
SLDRGFGRCIVMKKYSAIIQKHSNRTSDRILRPNRAADTAGRMQILDNDGIAAPGEILRP
NDIYINKESPIDTRTPITGSAANLPDSAYRSNAQSFKGHGGEVVDRVVLCPDKDNNMCIK
FLIRHTRRPELGDKFSSRHGQKGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGK
MIELLGGKAGVSCGRFHYGSAFGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCP
LQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIA
YGASMLIYERLMLSSDPFEVQVCTACGLLGYYNHKLKTGICSSCKNGDKISTMKLPYACK
LMIQELQSMNIVPRLKLADA
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgggtctcaaacacgatcagttcagtgggggcaacaaggtacagagtgaccct
ttggatgactctggctttgaccaaaggatcctaactgctcctataaaatctgctgttgac
aagttccagcttcttcccgagttcctcaaggttaggggattggtgaagcaacatttggat
tcctttaactattttgttaggactgggataaggaaaattgttcgggctaacaatcttatg
gtggcaagtaggtaccagcatatatatgtaaggttttcaaatgtcagaattggtaaacca
tcaagaacagttgagggtattactgaggaacttactccacaaatgtgccgcttaagtgac
caaacgtatgcggctccaatatatgttgatgttgagtacacacaaggaagtcacgataac
ccaacaaaagaaagaaggcctggtgttgttattggaagtatgcctattatgctgcggagt
tgttgttgtgtcttgtatgggagagatgaagctgaacttgctaaactcggtgagtgcccc
cttgatcctggaggatattttgtaatcaaagggactgagaaggtgattttgatacaagag
caactgtcaaagaatagaataattatagacactgacaagaaaaaaaacattactgcatct
gttacatgcagcacggagaaaataaaaacaaaaactgttattgtgatggaaaatgagaag
ctgtggttacaattgaatcaatttcctaagaaggttcctcttatggtagttatgaaagct
atggggatggagagtgatcaagaagttatacagatggttggaagagatcctcgttacagt
ttgctactgttgccctctattgaggaatgtacaaaatgtaaggtatatacgcaagagcaa
gcattagaataccttgattcaaaggtaaaacgtcccatgtattcaaacaattcagctgaa
aaggaaggaagagctttttctgtcctaagagatgtatttcttgcaaatgtgcctgtggat
caagataattttcggcagaaatgtatatatgttgctgttatgatgagacgcatactggat
gcaattttaaatcaagatgctatggatgacaaggattatgtgggaaacaagcggttggag
ttatctggccagttaatatctctgctttttgaggatctctttaagtcaatgacaaccgag
cttaagaatttgactgacaaattgttagataaaccagacaaggctaagaacatcgacata
agtaagaatcttgttcgtttgggggataccatcagtcttggtctggagaggactctgtcc
actggaaattttgaaattaagaggtttagaatggaaaggaaaggaatgacacaggtgttg
caaaggttatcgtttattggtgctttgggccacatgacaagagtctcaccacagtttgag
aagtcaaggaaagtaagtggacctagagctttgcagcctagtcagtggggcatgctttgt
ccttgtgatacccctgaaggtgagtcttgtggactagtgaagaacttggctttgatgact
catgttactaccgatgaagaggaagcccccttgatttctctgtgctattatttgggtgtt
gaagacacgggacgtctctctgccgaggagcttcatacaccagattcctttcttgtcatt
tttaatggtttgattcttggcaaacataggaggccacagcgttttgctgctgcaattaga
aagttacgtagagctggtaaaattggcgagtttgtgagcgtctatgtcaacgataagcag
caatgtgtctacttagcttctgatggtggcagagtttgccgtccccttgtcattgcagac
aagggaatatcaagaatcaaacagcatcatatgaaagagttaatggatggagttcgcaca
tttgatgattttttacgagatgggttgcttgagtatcttgatgttaatgaagaaaacaat
gctttgattgctttatatgaaggagatgccacgccagaaactactcacattgagattgag
ccttttactatattgggagttattgcggggttaattccatatcctcatcataatcagtca
cctagaaacacatatcagtgtgcaatggggaagcaagctatgggaaatatagcatttaat
cagctacgccggatggatagcttgctttacctactggtttatcctcaacgacctttgctt
acaacaaagacaattgagctggttggatatgataagcttggagctggtcaaaatgccaca
gtagctgtaatgagctatagtggttatgatatagaagatgccattgtcatgaacaaggca
tctcttgatcgtgggtttggtcgttgtattgttatgaagaagtatagtgccatcattcag
aaacattccaatcgcacatcagaccgaatacttcggcccaatagagctgcagacactgca
ggacgcatgcagatacttgataatgatggtattgccgctccaggggaaatccttaggcca
aatgacatctatatcaataaggaatcacctattgatacacgtactccaattacaggatct
gctgcaaatttgcctgatagtgcatatcggtccaatgcacaatcattcaagggtcatgga
ggggaagtagttgatagggtggttctatgccctgataaggataacaacatgtgtatcaaa
tttcttattcgtcacactcgtaggcctgagcttggtgataaatttagcagcagacatggg
caaaaaggtgtttgtggaactattgtcccgcaagaagactttccattttctgagaaaggc
atttgtcctgatctgattatgaatcctcatggtttcccaagtcgaatgactgttggaaag
atgatagagcttcttggagggaaagcaggggtttcatgtggcaggtttcactatggcagt
gcttttggggaaagaagtggtcatgctgacaaggttgaaaccataagtgaaactcttgtc
agtaaaggattcaactacagtgggaaagatttcatttattcaggtattacaggttgccca
ttgcaagcatatatttttatgggtccaatttactaccagaaattaaaacatatggtgctt
gataagatgcatgctcgtggtagtggtcctcgtgtcatgctaactagacagcctacagaa
gggagagctagaaatggaggtcttcgtgttggagaaatggaacgggattgcttgattgcg
tatggtgctagtatgttaatttatgagcgactcatgttgtctagtgatccttttgaagtc
caggtgtgtacagcgtgtggattgttagggtattataaccacaagctgaaaactggtatt
tgttcatcttgtaagaatggagacaagatttctaccatgaagctgccatatgcatgtaaa
ctcatgattcaggaactccaatcaatgaatattgttcctcgcttaaagctggcagatgcg
tga
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