Ceratina calcarata (carpenter bee): 108627245
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Entry
108627245 CDS
T06061
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3 isoform X1
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03020
RNA polymerase
ccal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108627245
09124 Replication and repair
03420 Nucleotide excision repair
108627245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccal03021
]
108627245
03400 DNA repair and recombination proteins [BR:
ccal03400
]
108627245
Transcription machinery [BR:
ccal03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108627245
DNA repair and recombination proteins [BR:
ccal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108627245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
108627245
NCBI-ProteinID:
XP_017883898
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MPYANQPSVHISDLTEENVKFQVEDTELSVANSMRRVFIAETPTMAIDWIQLEANSTVLS
DEFLAHRIGMIPLISDDVVDRIQYTRDCQCMDFCPECSVEFTLDVKCTEDQTRHVTTADF
KSSDPRVLPVTSRHREDDASEYGETDEILIVKLRKGQELKLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNSMRHTLYPKPDEWPKSEYSELEEDQYEASFNWEAKPNKYYFNVESSGALK
PENIVMMGIAALKNKLSNLQTQLSHEVQSDALSIHH
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgcaaatcaaccgtcggttcacatctcggatctgaccgaggagaacgtaaaa
ttccaagtagaagatacagaattgagtgtagcaaatagcatgagacgcgtatttatcgct
gaaacacctaccatggctatcgattggatacaattggaagccaattcgactgtgctgagt
gatgaatttttagctcacagaatcggaatgataccattgataagtgacgatgttgttgat
aggatacaatatacaagagattgccaatgcatggatttctgtccagaatgtagtgtggag
tttacccttgatgtaaaatgtacagaagatcaaacacgacatgttaccacagcagatttt
aaatccagtgacccaagagtacttcctgttacgtccagacacagagaagatgatgctagt
gaatatggagaaacagatgagatcttaatagtaaaattgagaaagggtcaagaattgaag
ttaagagcatatgcaaagaaaggttttggaaaagaacatgcgaaatggaatcccactgcg
ggagtgagctttgaatatgatccagacaattcaatgagacacacactgtacccaaagcca
gatgaatggccaaagtcagagtatagtgaattagaagaagatcaatacgaggcatcattc
aattgggaagctaagccaaacaagtattattttaatgtggaaagcagtggagctttgaag
cctgaaaatattgtaatgatgggcatcgcagcactgaaaaataaattatccaatttgcaa
acgcaattgagccatgaggttcaaagtgatgccctcagcattcatcattga
DBGET
integrated database retrieval system
