Ceratina calcarata (carpenter bee): 108631437
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Entry
108631437 CDS
T06061
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108631437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccal03021
]
108631437
Enzymes [BR:
ccal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108631437
Transcription machinery [BR:
ccal03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108631437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
108631437
NCBI-ProteinID:
XP_017890843
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MLVEPKLTNTSPDFGKPPEEQNPLLRSLGSPHTDSFNYMLEDGLSEAVKENPLVYIHLPN
EDKIALWIDDVSIHQPTVPSGTIGVKSHKIYPTECRQRGCTYKGKLTVRLGWSINNKVQE
ALERDLGEIPIMIKSNRCHLNKMSPADLVAHGEHEQEWGGYFVIKGLERLIRMLLMTRRN
YPIAIRRPGWKQRGVQFSDLGLLLRSVRNDNTTSNNTLHYVTNGSAKLMFTYRKVLYYVP
LVLMLKCLMDVSDIFIYNALTAGCEEDLYYKGCILNMMRAIHQEDLHSHEKCKAYIGRIF
RIKFYELPQDATDTDVCDFIIKHCIAIHLDNPTDKFNLLVFMTKKLFALANNKCAVEGAD
AVMMQECLLGGHLYLQVLKEKLYGWLTGLKMGILKRARSAGNRYILNLQEMLNVMKHGNS
LEAQMENFLSTGNIRSPSGLGLMQSSGLTIVAENINRMRYMSHFRAIHRGSFFQEMRTTE
ARQLLPDAWGFICPVHTPDGAPCGLLNHLTMNCIITKHPDQKLLDNIPVILMNLGMVPLS
IADNWKNSYTVMLDGKLIGLIDDNIIARVTDKLRLLKIKGKEVPYTLEIALVPKKSVPSQ
YPGLYLFTSAARMMRPVMNLAAKKVEYIGTFEQVYLNVCVTPEEAYEGLTSHQELSKTAF
LSNLACLIPMPDCNQSPRNMYQCQMGKQTMGTPSHTWQLQSETKLYRLQTPATPLFRPVH
HDKINLDDFAMGTNAIVAVISYTGYDMEDAMIINKAAYDRGFAHGMIYKSEFVDLKDQQS
YFARNPDKPELAEKLDTDGLPIPGTIISEGDPYYCYYDADQSTYSVGRYHGKENAYIDTV
KLCGTLHSNVPRRACITFRIPRNPSVGDKFASRAGQKGICSQKWPAEDLPFTETGMIPDI
VFNPHGFPSRMTIAMMIEVMAGKSAAVHGLVHDATPFRFNEDDTAVEYFGKLLERGGYNY
YGTERMYSGIDGREMTADIFFGVVHYQRLRHMVSDKWQVRSTGPIDVLTRQPIKGRRRGG
GVRFGEMERDSLISHGCSFLLQDRLFHCSDKTTTLVCQKCGTLLGPVMEMTFSATGIRDR
TRCRLCGDDESVREIDIPYIFRYLVTQLTSCNINVKLSFAER
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttggtcgaaccgaagttgacgaacacgtcaccggatttcggtaaaccacccgaagaa
cagaaccccttactacgaagcttgggatctccacataccgattcttttaattacatgttg
gaggacggtctctccgaggctgttaaagagaatccacttgtttatattcacctaccgaac
gaagacaagatagctctttggatcgacgatgtatccatccatcagcctaccgttccatcc
ggtacgatcggcgttaagagccacaaaatttatcccacggaatgtcgacagagaggctgt
acttacaaaggaaaactgacggtccgattaggatggtcgatcaataataaagtgcaggag
gctctcgaaagagatttaggagagatcccgatcatgattaaatctaacagatgccattta
aataaaatgagcccggcagatttagtggctcatggcgagcacgaacaagaatggggcgga
tacttcgtgatcaaaggactcgaaagacttataagaatgttactaatgactagaaggaat
tacccgatcgctattagaagacctggctggaagcaacgcggtgtgcagttcagcgatctc
ggtttgcttctgaggagcgtgagaaacgataacaccacgtctaacaacactttacactac
gttaccaatggctccgcgaaactgatgttcacgtacagaaaagttttatactacgttcca
ctggtactaatgttaaaatgtttgatggacgtctcggatatttttatttacaacgcgttg
acagccggatgcgaggaggatctctattacaagggttgcattttgaacatgatgagggcg
atacaccaagaggatctgcatagccatgagaaatgcaaagcttacataggaaggatattt
agaatcaaattttatgaactaccgcaggatgccaccgacacggacgtctgtgactttatc
atcaaacactgtatagccattcatcttgacaatccgacggacaagttcaatctactcgtt
ttcatgacgaagaagctgttcgctctggcgaataataaatgtgccgtggaaggcgccgat
gctgtgatgatgcaggagtgcttactgggaggtcatttgtatttgcaagtattaaaagag
aaattgtacggttggctgaccgggttgaaaatgggtatcttaaagcgagcgagaagcgct
ggcaatcgatacattctaaatctacaggaaatgttgaacgtaatgaaacacgggaattct
ctggaagcgcaaatggagaactttttgtctactggaaacatccggtccccgagtggactg
ggattgatgcaaagctcgggactcacgatcgttgccgagaatattaacaggatgcgttac
atgagccatttccgtgcgatacacagaggctctttctttcaagaaatgaggaccacagag
gctagacaattattaccggatgcctggggtttcatctgccctgtacatacgcccgacggt
gcgccctgcggccttctaaatcatttgactatgaactgcatcattacaaaacatcccgat
cagaaattactagataacattcctgttatattaatgaaccttggaatggtcccgctgtcg
attgctgacaattggaagaactcatacaccgtaatgttggacggaaaattaattggatta
atagacgacaatataatcgcgagagtgaccgacaagttgcgattgttgaaaatcaaaggg
aaagaggttccgtacacgttggaaatagcattggtaccaaagaaaagtgtaccgtcacaa
tatccaggattgtatctgttcacgagcgcagctcgcatgatgcggccagtaatgaattta
gctgccaagaaggtggaatatattgggacgtttgaacaagtctatttaaacgtctgtgta
acacccgaagaagcttacgaagggctgacatcgcatcaagaactatcgaagacagctttt
ctaagtaatttagcatgtctcatcccgatgccagattgcaatcaaagtccgcgaaacatg
tatcagtgtcagatgggtaaacaaactatgggtactccgtctcatacgtggcaattgcaa
tcggagacaaaattatacaggcttcaaacgccggctacacctttgtttcggccggtacat
cacgacaagattaatctcgatgattttgccatgggtactaacgcgatagttgccgttatc
tcttacacgggatacgatatggaagacgcgatgatcataaacaaggcagcgtacgacaga
ggttttgcccatggaatgatctacaagtccgagttcgtagatttgaaggatcaacagagt
tactttgctaggaatcccgataaacctgaactcgcggagaagctagataccgatggcctt
cccataccgggtacaattatttcggagggtgacccatactattgttattacgacgcggat
cagtctacgtactctgtcgggagataccatggaaaggagaatgcttatatcgacactgtg
aaactctgtggtacattacatagtaacgttccacgtagagcctgcatcacatttcgtatt
ccccgtaatccaagcgtcggggataagtttgcctcgagggctggtcaaaagggtatttgc
tcgcagaagtggcccgcggaagatttaccattcacggaaaccggcatgattcccgacatc
gtgttcaaccctcacggtttcccaagtcgtatgacgatagctatgatgatcgaagtgatg
gctggaaagtcggcggccgtgcacgggttagtgcacgacgcgacgccattcagatttaac
gaggacgataccgcggtcgaatattttgggaaactgttggaacgcggtgggtacaattat
tatggaacagagagaatgtactcgggtatagacggaagagaaatgaccgccgatattttc
ttcggcgtggtacactatcaacgtttacggcacatggtttcggacaagtggcaggtgaga
agcaccggaccgatcgacgttctgacgaggcagcctatcaagggtagaagaagaggaggc
ggtgttcgatttggagagatggaacgagactctttgatatctcacggttgctcgtttttg
ctgcaggatcgtcttttccattgctcggacaagactactactttggtttgccaaaagtgc
ggaacgctactgggaccggtaatggagatgacttttagcgcgacaggaatacgagatagg
acgcgatgccgcctctgtggcgatgatgaatctgtccgggaaatcgacataccgtacata
ttccgatacctcgtgacacaattgacgtcttgcaacatcaatgtaaaattatcgttcgca
gagagatga
DBGET
integrated database retrieval system
