Cupriavidus campinensis: M5D45_03620
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Entry
M5D45_03620 CDS
T08350
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ccam
Cupriavidus campinensis
Pathway
ccam00540
Lipopolysaccharide biosynthesis
ccam01100
Metabolic pathways
ccam01250
Biosynthesis of nucleotide sugars
Module
ccam_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
M5D45_03620 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ccam01005
]
M5D45_03620 (rfaD)
Enzymes [BR:
ccam01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
M5D45_03620 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ccam01005
]
Core region
M5D45_03620 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
KR
LAMININ_IV_B
DapB_N
adh_short
Motif
Other DBs
NCBI-ProteinID:
URF04943
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All DBs
Position
1:795484..796479
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AA seq
331 aa
AA seq
DB search
MTIIVTGAAGFIGSNLVKGLNERGETNIVAVDNLTRAEKFGNLVDCEIADYLDKSEFVQR
FARGDFGKVRAVFHEGACSDTMETDGRYMMENNYRYTLALMEACLEQGTQFLYASSAATY
GASTMFREDREYERPLNVYGYSKFLFDQVVRRRLPATHSQIVGFRYFNVYGPREYHKGRM
ASVAFHHFNQFRAEGSVKLFGEYNGYAPGTQSRDFVSVEDVVKVNLYFLDHPEKSGIFNL
GTGRSQPFNDIAASVVNTLREIDDKPPLSLEEMVQEGLVEYVKFPDALRGKYQCFTQSDV
SRLRAAGYTAPFLTVQEGVSRYCKWLLERNG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcatcgtgaccggcgccgccggctttatcggcagcaacctcgtcaagggcttg
aacgagcgcggcgagaccaatatcgtcgcggtcgacaacctgacccgggccgagaagttc
ggcaacctcgtggactgcgagatcgccgactacctcgacaagtcggaattcgtccagcgc
tttgcgcggggggacttcggcaaggttcgcgcggtgttccatgagggcgcgtgctccgac
accatggagaccgacggccgctacatgatggagaacaactaccgctacacgctggcgctg
atggaagcctgcctggagcagggcacgcagttcctctacgcctcgtcggcggccacctac
ggcgcgtcgacgatgttccgcgaggaccgcgagtacgagcgcccgctgaacgtgtacggc
tattcgaagttcctgttcgaccaggtggtgcggcgccggctgccggcgacccactcgcag
atcgtcggcttccgctacttcaacgtgtatggcccgcgcgagtaccacaagggccgcatg
gcgtcggtggcgttccaccacttcaaccagttccgggccgaaggctcggtgaagctgttc
ggcgagtacaacggctacgcgccgggcacgcagagccgcgatttcgtgtccgtggaggac
gtggtcaaggtcaacctgtacttcctcgatcatccggaaaagtccggcatcttcaacctt
ggcaccgggcgctcgcagccgttcaacgacatcgccgccagcgtggtcaacacgctgcgc
gagatcgacgacaagccgccgctctcgctcgaggagatggtgcaggaagggctggtcgaa
tacgtgaagttccccgacgcgctgcgcggcaagtaccagtgcttcacccagtccgacgtg
tcgcgcctgcgcgcggcgggctataccgccccgttcctcacggtgcaggaaggcgtgtcg
cgctactgcaagtggctgctcgagcgtaacggctga
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