Cupriavidus campinensis: M5D45_06275
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Entry
M5D45_06275 CDS
T08350
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ccam
Cupriavidus campinensis
Brite
KEGG Orthology (KO) [BR:
ccam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccam03009
]
M5D45_06275 (rimO)
Enzymes [BR:
ccam01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
M5D45_06275 (rimO)
Ribosome biogenesis [BR:
ccam03009
]
Prokaryotic type
ribosomal protein modification factors
M5D45_06275 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
URF05946
UniProt:
A0AAE9I8C9
LinkDB
All DBs
Position
1:1343320..1344654
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AA seq
444 aa
AA seq
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MGFVSLGCPKALVDSEQILTQLRAEGYAISGTYNDADLVVVNTCGFIDEAVQESLDAIGE
ALAENGKVIVTGCLGAKKDAAGHDIVSSVHPKVLAVTGPHALGEVMQAVHTHLPKPHDPF
TDLVPPAGIKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVAEVMLEAENLFKSG
VKELLVISQDTSAYGVDVKYRTGFWNGRPLKTRMTELVGALGELASQSGAWVRLHYVYPY
PHVDEIIPLMSQGNVLPYLDVPLQHAHPDVLKRMKRPANAEKTLDRIRAWREMCPELTIR
STFIAGFPGETEEEFQTLLDFIAEAELDRVGCFAYSPVDGATANDLPGALPDEVRDERRA
RFMEVAEEVSARRLQRKVGQTLRVLVDEVNQDGGVGRSSADAPEIDGLVYIDPAAKPSQR
YKTGDFVHVKITGADGHDLWGEVV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtggggtttgtcagcctgggctgtccgaaggcgctggtggattccgagcagatcctgacc
cagttgcgcgccgaaggctacgcgatcagcggtacctataacgatgccgatctggtcgtg
gtgaacacctgcggcttcatcgacgaagccgtgcaagagagcctggacgccatcggcgag
gccctggccgagaacggcaaggtcatcgtcacgggttgcctgggcgccaagaaggatgcg
gccgggcacgacatcgtctcgtcggttcacccgaaggtgctggccgtgaccggcccgcat
gcgctgggggaggtcatgcaggccgtccacacgcacctgcccaagccgcacgatccgttc
acggacctcgtgccgccggccggcatcaagctcacgcccaagcattacgcctacctgaag
atttccgaaggctgcaatcaccgctgctcgttctgcatcatcccgtcgatgcggggtgat
ctggtctcgcgtccggtggcggaagtgatgctggaggctgaaaacctgttcaagtcgggc
gtcaaggagctgctggtgatctcgcaggacaccagcgcctatggcgtggacgtgaagtac
cgcaccggcttctggaatggccgcccgctcaagacccgcatgaccgaactggtcggcgcg
ctgggcgaactggccagccagtccggcgcctgggtgcgcctgcactacgtgtacccgtac
ccgcacgtggatgagattattccgctgatgtcgcagggcaacgtgctgccgtacctcgac
gtgccgctccagcacgcccacccggacgtgctcaagcgcatgaagcgcccggccaatgcc
gaaaagacgctggatcgcattcgcgcctggcgcgagatgtgccccgagctgaccatccgc
agcacgttcatcgccgggttcccgggcgagaccgaggaagagttccagacgctgctcgac
ttcatcgccgaagccgagctggaccgcgtgggctgcttcgcctattcgcccgtggacggc
gccaccgcgaacgacctgcccggcgcgctgccggacgaggtacgtgacgagcgccgcgcg
cggttcatggaggtggccgaggaagtttccgcgcgccgcctgcaacgcaaggtcggccag
acgctgcgcgtgctggtggacgaggtgaaccaggatggcggcgtgggccggtcgtccgcc
gatgcgcccgagatcgacggtctggtctatatcgacccggccgcgaagccgtcgcaacgc
tacaagaccggcgacttcgtccacgtgaagattaccggcgccgatggccacgatctgtgg
ggtgaagtggtttaa
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