KEGG   Castor canadensis (American beaver): 109679450
Entry
109679450         CDS       T04791                                 
Symbol
Vcam1
Name
(RefSeq) vascular cell adhesion protein 1
  KO
K06527  vascular cell adhesion molecule 1
Organism
ccan  Castor canadensis (American beaver)
Pathway
ccan04064  NF-kappa B signaling pathway
ccan04514  Cell adhesion molecules
ccan04668  TNF signaling pathway
ccan04670  Leukocyte transendothelial migration
ccan04933  AGE-RAGE signaling pathway in diabetic complications
ccan05143  African trypanosomiasis
ccan05144  Malaria
ccan05417  Lipid and atherosclerosis
ccan05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    109679450 (Vcam1)
   04668 TNF signaling pathway
    109679450 (Vcam1)
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    109679450 (Vcam1)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    109679450 (Vcam1)
 09160 Human Diseases
  09174 Infectious disease: parasitic
   05144 Malaria
    109679450 (Vcam1)
   05143 African trypanosomiasis
    109679450 (Vcam1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    109679450 (Vcam1)
   05418 Fluid shear stress and atherosclerosis
    109679450 (Vcam1)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    109679450 (Vcam1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:ccan04090]
    109679450 (Vcam1)
   04091 Lectins [BR:ccan04091]
    109679450 (Vcam1)
CD molecules [BR:ccan04090]
 Proteins
  109679450 (Vcam1)
Lectins [BR:ccan04091]
 I-type lectins (Siglecs)
  109679450 (Vcam1)
SSDB
Motif
Pfam: I-set Ig_3 ig C2-set Ig_2 V-set Ig_5 C2-set_2 ICAM_N Ig_4 Ig_6 ICAM1_3_5_D2 C1-set Adhes-Ig_like TrkA_C
Other DBs
NCBI-GeneID: 109679450
NCBI-ProteinID: XP_020010239
UniProt: A0A8C0WR23
LinkDB
Position
Unknown
AA seq 739 aa
MPGKVAVNFGVSNILWIVFAASQAFKIDTSPEYRTLAQIGNSIMLTCSTEGCESPSFSWR
TQIDSPLNGKVKNEGTKSTLTMDPVSFENEHSYLCTATCGSGKLEKEIQVAIYSFPKDPE
IHLSGPLEVGKPITVKCVVPDVYPFDRLEMDLLKDDHLMKKEEFLEDMDRKSLETKSLEV
TFTPVIEDIGKALVCRAKLHIDEIDSVPKERETTKELEVYISPKNTVISVHPSTRLQEGD
SVTMTCSSEGLPAPEIFWSKKLDNEYVQLLSGNATLTLIAMRMEDSGIYVCEGVNLIGRN
RKEVELIVQEKPFTVDISPGPWVAAQIGDSVVLTCGVTGCESPSFSWRTQIDSPLSGKVR
SEGTESTLTLSPVSLENEHSYLCTVTCGRKKQEKGIHIELYSFPRDPEIEMSGLLVNGNP
ATVSCTVSDVYPLDHLEIRLLKGEAVLMNKHFLEETDMKSLETRSLEMTFTPSPEDSGKV
LICQAKLHIGEMESEPKQRQNTQTLYVNVAPKDPTILVSPSSILEEGSSVNMTCYSDGFP
APKTLWSRQLNNGDVQPLSENTTLTLPSTKMEDSGIYVCEGINQAGISRKEVELIIQVSP
KDMQLTAFPSESVKEGDTVIISCTCANVPETWIILKKKAESGDTVLKSIDGAYTIRKAQL
QDAGVYECESKNEVGSQSRSLTLDVKGRVNNKDYFSPELLVLYCASSLIIPAIGMLIYFA
RKANMKGSYSLVEAQKAKV
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgcctgggaaggtggccgtgaactttggagtctcaaatatactttggatagtatttgca
gcttctcaagcttttaaaatagacacctccccggaatacagaactctggctcaaattggt
aactccatcatgttgacttgtagcacggaaggctgtgagtccccatctttctcctggaga
actcagatagacagtccattgaatgggaaggtgaagaacgaggggaccaagtctacgctg
accatggatcctgttagttttgagaatgaacactcttacctgtgtacagcaacttgcgga
tctgggaagctagaaaaagaaatccaggtggctatctactctttcccaaaggatccagag
attcatttgagtggccctctagaggtcgggaagcctatcacagtcaagtgtgttgtccct
gatgtatacccgtttgacaggctggagatggatttattgaaagatgaccatctcatgaag
aaggaggagtttctggaggatatggacaggaagtctctggaaaccaagagtttagaagta
acctttactcctgtcattgaggatattggaaaagctcttgtttgcagagctaaattacac
attgatgaaattgattctgtgcccaaagaaagggagactaccaaagaacttgaggtctac
atctcacccaagaacacagttatctctgtgcatccctccacgaggctgcaggaaggtgac
tctgtgacaatgacatgttctagtgagggcttacctgctccagagattttctggagcaag
aaattagataatgagtatgttcagcttctctctgggaacgcaactctcactttaattgcc
atgaggatggaagattctggaatttatgtgtgtgaaggagttaacttgattggaagaaat
agaaaagaggtggaattaattgttcaagaaaaaccatttactgtcgacatctcccctggg
ccctgggttgctgctcagattggtgactcagtcgtgctgacatgtggtgtcacaggctgt
gagtccccttctttctcttggagaacgcagatagacagccctctgagcgggaaggtgagg
agtgaggggacagagtccacgctgaccctgagccctgtgagtttggagaatgaacactct
tacctgtgtactgtgacatgtggacgtaagaaacaggagaagggaatccacatcgagctc
tactcattccctagagatccagaaattgagatgagtggcttgctggtgaatgggaaccct
gccacggtgagctgtacggtttctgatgtgtacccccttgaccatctggaaattagacta
ctgaagggggaggctgttctgatgaataagcactttttggaggaaacggacatgaaatcc
ctagagaccagaagtctggaaatgactttcacccccagccctgaagattctggaaaagtt
cttatttgtcaggctaagttacatattggtgaaatggaatctgaacccaaacaaaggcag
aacacacagaccctttatgtcaacgtcgcccccaaagatcctaccatcttggtcagcccc
tcctccatcctggaggagggcagttctgtgaatatgacatgctacagtgatggctttcca
gctccaaaaaccctgtggagtagacagctaaataatggggatgttcagcccctttctgag
aatacaactctcaccttaccttctacaaaaatggaagattctggcatttatgtgtgtgaa
gggattaaccaggctggaataagcagaaaagaagttgaattaatcatccaagtttctcca
aaagacatgcagcttacagcttttccctctgagagcgtcaaggaaggagataccgtcatt
atctcctgcacatgtgcaaatgttccagagacttggataatcctgaagaaaaaagcggag
tcgggggacacggtgctgaagtctattgatggcgcgtacaccatccgcaaagcccagctg
caggatgcaggcgtgtacgagtgcgaatcgaaaaatgaagtcggctcccagtcgaggagt
ttaacacttgatgttaaaggaagagtaaataacaaggattatttttctcctgaacttctg
gtgctctattgtgcttcctccctaataattcctgccattgggatgcttatctactttgca
agaaaagccaacatgaaaggatcatacagtcttgtcgaggcacagaaagcaaaagtgtag

DBGET integrated database retrieval system