Castor canadensis (American beaver): 109679450
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Entry
109679450 CDS
T04791
Symbol
Vcam1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan04064
NF-kappa B signaling pathway
ccan04514
Cell adhesion molecules
ccan04668
TNF signaling pathway
ccan04670
Leukocyte transendothelial migration
ccan04933
AGE-RAGE signaling pathway in diabetic complications
ccan05143
African trypanosomiasis
ccan05144
Malaria
ccan05417
Lipid and atherosclerosis
ccan05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
109679450 (Vcam1)
04668 TNF signaling pathway
109679450 (Vcam1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109679450 (Vcam1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
109679450 (Vcam1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
109679450 (Vcam1)
05143 African trypanosomiasis
109679450 (Vcam1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
109679450 (Vcam1)
05418 Fluid shear stress and atherosclerosis
109679450 (Vcam1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
109679450 (Vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ccan04090
]
109679450 (Vcam1)
04091 Lectins [BR:
ccan04091
]
109679450 (Vcam1)
CD molecules [BR:
ccan04090
]
Proteins
109679450 (Vcam1)
Lectins [BR:
ccan04091
]
I-type lectins (Siglecs)
109679450 (Vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
C2-set
Ig_2
V-set
Ig_5
C2-set_2
ICAM_N
Ig_4
Ig_6
ICAM1_3_5_D2
C1-set
Adhes-Ig_like
TrkA_C
Motif
Other DBs
NCBI-GeneID:
109679450
NCBI-ProteinID:
XP_020010239
UniProt:
A0A8C0WR23
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MPGKVAVNFGVSNILWIVFAASQAFKIDTSPEYRTLAQIGNSIMLTCSTEGCESPSFSWR
TQIDSPLNGKVKNEGTKSTLTMDPVSFENEHSYLCTATCGSGKLEKEIQVAIYSFPKDPE
IHLSGPLEVGKPITVKCVVPDVYPFDRLEMDLLKDDHLMKKEEFLEDMDRKSLETKSLEV
TFTPVIEDIGKALVCRAKLHIDEIDSVPKERETTKELEVYISPKNTVISVHPSTRLQEGD
SVTMTCSSEGLPAPEIFWSKKLDNEYVQLLSGNATLTLIAMRMEDSGIYVCEGVNLIGRN
RKEVELIVQEKPFTVDISPGPWVAAQIGDSVVLTCGVTGCESPSFSWRTQIDSPLSGKVR
SEGTESTLTLSPVSLENEHSYLCTVTCGRKKQEKGIHIELYSFPRDPEIEMSGLLVNGNP
ATVSCTVSDVYPLDHLEIRLLKGEAVLMNKHFLEETDMKSLETRSLEMTFTPSPEDSGKV
LICQAKLHIGEMESEPKQRQNTQTLYVNVAPKDPTILVSPSSILEEGSSVNMTCYSDGFP
APKTLWSRQLNNGDVQPLSENTTLTLPSTKMEDSGIYVCEGINQAGISRKEVELIIQVSP
KDMQLTAFPSESVKEGDTVIISCTCANVPETWIILKKKAESGDTVLKSIDGAYTIRKAQL
QDAGVYECESKNEVGSQSRSLTLDVKGRVNNKDYFSPELLVLYCASSLIIPAIGMLIYFA
RKANMKGSYSLVEAQKAKV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggaaggtggccgtgaactttggagtctcaaatatactttggatagtatttgca
gcttctcaagcttttaaaatagacacctccccggaatacagaactctggctcaaattggt
aactccatcatgttgacttgtagcacggaaggctgtgagtccccatctttctcctggaga
actcagatagacagtccattgaatgggaaggtgaagaacgaggggaccaagtctacgctg
accatggatcctgttagttttgagaatgaacactcttacctgtgtacagcaacttgcgga
tctgggaagctagaaaaagaaatccaggtggctatctactctttcccaaaggatccagag
attcatttgagtggccctctagaggtcgggaagcctatcacagtcaagtgtgttgtccct
gatgtatacccgtttgacaggctggagatggatttattgaaagatgaccatctcatgaag
aaggaggagtttctggaggatatggacaggaagtctctggaaaccaagagtttagaagta
acctttactcctgtcattgaggatattggaaaagctcttgtttgcagagctaaattacac
attgatgaaattgattctgtgcccaaagaaagggagactaccaaagaacttgaggtctac
atctcacccaagaacacagttatctctgtgcatccctccacgaggctgcaggaaggtgac
tctgtgacaatgacatgttctagtgagggcttacctgctccagagattttctggagcaag
aaattagataatgagtatgttcagcttctctctgggaacgcaactctcactttaattgcc
atgaggatggaagattctggaatttatgtgtgtgaaggagttaacttgattggaagaaat
agaaaagaggtggaattaattgttcaagaaaaaccatttactgtcgacatctcccctggg
ccctgggttgctgctcagattggtgactcagtcgtgctgacatgtggtgtcacaggctgt
gagtccccttctttctcttggagaacgcagatagacagccctctgagcgggaaggtgagg
agtgaggggacagagtccacgctgaccctgagccctgtgagtttggagaatgaacactct
tacctgtgtactgtgacatgtggacgtaagaaacaggagaagggaatccacatcgagctc
tactcattccctagagatccagaaattgagatgagtggcttgctggtgaatgggaaccct
gccacggtgagctgtacggtttctgatgtgtacccccttgaccatctggaaattagacta
ctgaagggggaggctgttctgatgaataagcactttttggaggaaacggacatgaaatcc
ctagagaccagaagtctggaaatgactttcacccccagccctgaagattctggaaaagtt
cttatttgtcaggctaagttacatattggtgaaatggaatctgaacccaaacaaaggcag
aacacacagaccctttatgtcaacgtcgcccccaaagatcctaccatcttggtcagcccc
tcctccatcctggaggagggcagttctgtgaatatgacatgctacagtgatggctttcca
gctccaaaaaccctgtggagtagacagctaaataatggggatgttcagcccctttctgag
aatacaactctcaccttaccttctacaaaaatggaagattctggcatttatgtgtgtgaa
gggattaaccaggctggaataagcagaaaagaagttgaattaatcatccaagtttctcca
aaagacatgcagcttacagcttttccctctgagagcgtcaaggaaggagataccgtcatt
atctcctgcacatgtgcaaatgttccagagacttggataatcctgaagaaaaaagcggag
tcgggggacacggtgctgaagtctattgatggcgcgtacaccatccgcaaagcccagctg
caggatgcaggcgtgtacgagtgcgaatcgaaaaatgaagtcggctcccagtcgaggagt
ttaacacttgatgttaaaggaagagtaaataacaaggattatttttctcctgaacttctg
gtgctctattgtgcttcctccctaataattcctgccattgggatgcttatctactttgca
agaaaagccaacatgaaaggatcatacagtcttgtcgaggcacagaaagcaaaagtgtag
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