Castor canadensis (American beaver): 109682236
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Entry
109682236 CDS
T04791
Symbol
Polr3a
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03020
RNA polymerase
ccan04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109682236 (Polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
109682236 (Polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccan03021
]
109682236 (Polr3a)
Enzymes [BR:
ccan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109682236 (Polr3a)
Transcription machinery [BR:
ccan03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
109682236 (Polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
109682236
NCBI-ProteinID:
XP_020012952
UniProt:
A0A8B7U1E5
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNNHAPLLHGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKTCCHIMLSQE
EKQQFLDYLKRPGLTYLQKRGLKKKISDKCRKKSTCHHCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPIVSNFLQSFETAIEHNKEVESLLGRAQENLNPLIVLNLFKRIPAEDIPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWXRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVRNGPDIHPGANF
IQQRHMQMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTFKDTFFDRAKACQIIASILVGKDEKIKVHLPPPTILKPVTLWTGKQI
FSIILRPSDDNPVRANLRTKGKQYCGKGEDLCVNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIKAVFPCQNEPALSKNELTLTTESIMKKNEFLC
CQDSFLQEIKKFIKGVSERIKKTRDKYGINDNGTTEPRVLYQLDRITPTQIEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQFLKEDLPKVV
VQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTRTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADRDPDPPRRPLIFD
TSEFHIPLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttccgggagacggatgtggccaagaaaataagtcacatctgtttt
ggaatgaaatctcccgaggagatgcgccagcaggcacacatccaggttgtgagtaagaac
ctatacagccaggacaacaatcatgcccccttgctgcatggggtgcttgaccacaggatg
ggcacaagtgaaaaggaccgtccttgtgaaacctgtgggaaaaacttggctgactgccta
ggccactatgggtacattgacttggagttaccatgctttcatgtggggtacttcagagct
gtcatcggcatcttacagatgatctgcaaaacctgctgccacatcatgctgtcccaggag
gagaagcagcagttcctggattacctaaagaggcccggcctgacgtacctccagaagcga
ggcctgaagaagaaaatctctgacaagtgccggaagaaaagcacttgccaccactgtggt
gcatttaatggtactgtaaagaagtgtggcttactgaagataattcatgagaaatacaag
actaacaaaaaagtggtggatcccattgtatcaaatttccttcagtcctttgaaacagcc
attgagcataacaaagaagtagagtccctgctgggaagggcacaggaaaacttgaatccc
ttaatagttctgaacttgtttaaacgaatcccagctgaagatatccctctacttctgatg
aatcctgaagctggaaagccctctgatttgattctcacacgacttttggtgcctcccttg
tgtatcagaccatccgttgtgagcgatttgaagtctggcaccaatgaagatgatctgaca
atgaaattgacagaaatcattttcctaaatgatgtcattaaaaagcatcggatctcagga
gccaagacacagatgatcatggaggactgggatttcctgcagctgcagtgtgccctctac
atcaacagcgagctgtcaggcattcccctcaacatggcgcccaagaagtggnaccgtggt
tttgtacagcgcctgaaggggaaacagggtcgctttagaggcaatctgtcaggaaaaaga
gtggatttttctggcagaacagtcatctcacctgaccccaacctccggattgatgaagta
gctgtaccagttcatgtagccaaaattctaacttttcccgagaaagtaaacaaagcaaac
attaattttttgagaaaactggttcgaaatggccctgacattcatccaggagctaatttc
atccaacaaagacatatgcagatgaaaaggtttttgaaatatggaaatcgggaaaagatg
gctcaggagctcaagtacggtgacattgtggagagacacctcatagatggagacgtggtg
ctgtttaatcggcagccctcactgcacaaattgagcatcatggctcatctggccagagtc
aaaccccaccggaccttcagatttaatgagtgtgtctgcaccccctacaatgcagacttt
gatggtgatgaaatgaaccttcatcttcctcagacagaagaagccaaagccgaggccctc
gttctcatggggactaaagcaaatcttgtaactccaaggaatggggaaccactcattgct
gctattcaggattttctaacaggtgcctacctccttactttcaaggacactttctttgac
cgagccaaggcttgccaaatcattgcttcaatattggttggcaaggatgagaaaattaaa
gtgcacctcccaccccctacgatattaaagcctgtcaccttgtggactggaaagcagatc
ttcagtattatccttcgacctagtgatgacaatccagtgagggccaacctccgaaccaag
ggcaaacagtactgtggcaagggggaagacctctgcgtcaatgactcctatgttacaatc
cagaacagtgagttgatgagtggtagtatggacaaaggaacgctgggatcaggatccaag
aacaatattttctacattttgctacgagactgggggcagaatgaagccgctgatgcaatg
tcacggcttgccaggctggctcctgtctacttgtctaaccgcgggttctcaattgggatt
ggtgatgtcacacctggccagggactgttgaaggctaagtatgagttactgaatgctggc
tacaaaaaatgtgatgagtacattgaagccctgaacactggcaagctgcagcagcagcct
ggctgcactgctgaggagacgctggaggccctgatcctgaaggagctatctgtgatccgt
gatcacgctggcagcgcctgcctccgagagctggacaagagcaacagccccctcaccatg
gccctgtgtggctccaaaggttccttcattaacatatcacagatgattgcctgcgtggga
cagcaagccatcagcggctctcgagtgccagatggctttgaaaacaggtccttgcctcac
tttgaaaaacactcaaagctcccagctgccaaaggctttgtggctaatagcttttattct
ggcttaacaccaactgagtttttcttccacacaatggctggccgggaaggtctagtcgac
acagccgtaaagactgctgaaacaggatacatgcagagaaggctggtcaaatctctggaa
gatctctgttcccaatatgacctgacagtccgaagctccactggtgatatcatccagttc
atctacgggggagatggcttagatcctgcagccatggaggggaaagatgaacctttggaa
tttaaaagggttctggacaatatcaaagcagtattcccatgtcagaatgagcctgctctc
agtaaaaacgaactcaccctgaccaccgaatccatcatgaagaagaacgagttcctctgc
tgccaggacagcttcctgcaggaaataaaaaagttcattaagggggtttctgagaggatc
aagaaaaccagagataaatatggcatcaacgataacggcacaacagagccccgtgtgcta
taccagttggaccggatcacccccacccaaatagagaagtttctggagacctgtagggac
aagtacatgagggcacagatggagccaggctctgcagtgggtgcgctctgtgcacagagc
attggtgagccaggcacccagatgaccctgaagactttccattttgcaggtgtggcctcc
atgaacatcacactgggtgtgcctcggatcaaagagatcatcaatgcttccaaggccatc
agcactccaattatcacagcacagctagacaaggatgatgacgcggattatgcccgcctc
gtgaaaggcagaattgagaaaaccctccttggggagatttcagagtatatcgaagaagtg
tttcttcctgatgactgctttattcttgtcaagctctccctggaacggatcagacttttg
agactggaagtgaacgctgagacagtgcgttactccatctgcacatccaaactccgtgta
aagcctggcgacgtggctgttcatggggaggctgtggtgtgtgtcacccctagagaaaac
agcaagagctccatgtactacgttcttcagtttctgaaagaggacctccccaaggtggta
gtgcagggcatcccagaggtgtccagagctgtcatccacatcgacgagcagagtggaaag
gaaaagtacaagcttctggtggaaggtgacaatctgcgggcagtgatggccacccacggt
gtgaaaggcacccggaccacctccaataacacttacgaggtggaaaaaactctgggtatt
gaggctgcccggacaactatcatcaacgagatccagtacacgatggtcaaccacggcatg
agcatcgacaggaggcacgtgatgctgctctctgacctgatgacctacaagggtgaagtt
ctgggcatcactaggtttggcctggccaagatgaaggagagcgtgctgatgctggcctcc
tttgagaagactgctgatcatctctttgatgctgcctactttgggcagaaggactccgtg
tgcggggtgtccgagtgcatcatcatgggaatcccaatgaacattgggactgggctcttc
aagttgctccacaaggccgacagggacccagatcctcccaggaggccgctgatctttgac
acaagtgaattccacatcccccttgtcacatag
DBGET
integrated database retrieval system