Castor canadensis (American beaver): 109693730
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Entry
109693730 CDS
T04791
Symbol
Polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ccan
Castor canadensis (American beaver)
Pathway
ccan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109693730 (Polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccan03021
]
109693730 (Polr1b)
Enzymes [BR:
ccan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109693730 (Polr1b)
Transcription machinery [BR:
ccan03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109693730 (Polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
109693730
NCBI-ProteinID:
XP_020030842
UniProt:
A0A8B7VH91
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MDPGGRWRSLPSGPSLKHLTDPSYGIPKEQQQAALQDLTRAHVDSFNYAVHEGLSHAVQA
IPPFEFAFKDERISLTIVDAVISPPTVPKGTICKELKVYPAECRGRRSTYRGKLTADISW
AVNGISKGIIKQFLGYVPIMVKSQLCNLHHLPPQALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMVRPKWKSRGPGYTQFGVSMHCVREEHSAVNMNLHYVENGTVMLNFIY
QKELFFLPLGFALKALVGFSDYQIFQELIKGKEDDSFFRSSVSQMLRIVMEEGCSTQKQV
LNYLGECFRVKLNLPDWYPNEQAAEFLFNQCICIHLNSSTEKFYLLCLMTRKLFALARGE
CMEDNPDSLVNQEVLTPGQLFLMFLKEKMETWLVSIKMALDKKAQKTNVSLNTENLMKIF
SMGADLTRPFEYLLATGNLRSKTGLGFLQYSGLCIVADKLNFIRYLSHFRCVHRGAAFAK
MRTTTVRRLLPESWGFLCPVHTPDGAPCGLMNHLTAICEVVTQFAYTTSIPALLCSLGVT
PVDGAPHRPYSECYPVLLDGVMLGWVDKELAPGIADSLRHFKVLREKKIPPWMEVVLIPM
TGKPSLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQLFMNVAVFENEVFAGVSTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPVGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKTEFID
LAERIKQGDDTLVFGVKPGDTRVVQKLDDDGLPFIGAKLQHGDPYYSYLNLSTGESFVTY
YKSKENCIVDNIKVCSNDTGSGKFKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNFYGTERLYSGISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPLGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTLCNRSDTVDTVSVPYVFRYFVAELAAMNIKVKLDVI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcggtcggtggcggagcctccccagtgggcctagcctaaagcatttgacc
gacccatcttacgggatcccgaaggagcagcagcaggcggcgttgcaggacctgacgcgg
gcgcacgtggactccttcaactacgccgtgcacgagggtctcagtcacgcagtgcaggct
atacctccctttgagtttgcttttaaagatgagcgtatctctcttactattgtggatgcg
gtcatcagtccaccaacagttccaaaagggaccatctgcaaagagctcaaggtttatcca
gccgaatgtcgtgggcgaaggagtacctaccgtgggaagttgacagctgatatcagctgg
gcagtgaatggaatctcaaaaggaatcattaaacagtttcttggctatgttcccatcatg
gtgaagtcccagctctgtaacttacaccaccttcctccacaagccctcatcgagcaccat
gaggaggcagaggaaatgggaggttactttataatcaatggcattgaaaaagttatccga
atgttgattatgcctcggagaaatttccccattgcaatggtaagaccaaagtggaaaagc
agaggacctggatatactcagtttggagtttcaatgcactgtgtgagggaagaacattct
gctgtcaacatgaaccttcactatgtggaaaatggcacagttatgttgaactttatttac
cagaaagaattgttttttcttcctttgggatttgcactgaaggcgcttgttggcttttct
gattatcagatttttcaggaactcatcaaaggaaaagaggatgactctttctttaggagc
tctgtttctcagatgttaaggattgtaatggaagagggttgttccacacaaaagcaggtc
cttaactatctaggtgaatgcttcagagtaaaactcaatcttcctgactggtaccctaat
gaacaagctgcagagttcctgtttaaccagtgcatctgcatccacttgaactccagtact
gaaaagttttatttgctttgtctcatgacccggaagctctttgctttagcaagaggagag
tgcatggaggacaatcctgatagcttagtgaatcaggaagttcttacacctggtcaactc
ttccttatgtttctaaaggaaaaaatggaaacttggttagtgtctattaaaatggcctta
gataaaaaagcacagaagaccaatgtgtccttaaacactgaaaatttgatgaagattttc
agtatgggagcagaccttacaagaccatttgaatatcttcttgctactgggaatctgcga
tcaaaaacaggtcttggcttcctgcaatattctggactgtgtattgtggctgacaagctg
aacttcatacgctatctctcccatttccgctgtgtgcacagaggggctgcttttgcgaag
atgagaaccacgacagtacgcaggctgctgccagagtcctggggcttcctttgccctgtg
cacaccccagatggggcgccctgtggtctgatgaaccacttaactgccatatgtgaggtt
gtcactcagtttgcttatacaacatctattccagccttgctctgcagcttgggggtcact
cctgttgatggagccccacatcgaccatacagtgagtgctaccctgtcctgctggatggc
gtcatgctgggctgggtggataaggagcttgctcctggcattgcagattctctccggcat
tttaaggtgttgagagaaaaaaaaattcctccatggatggaggtggtccttatccccatg
acaggaaaaccaagtctgtacccaggattgttcctttttaccactccttgcagactggta
cggcctgtgcagaacttggaattgggcaaagaagaactaattggaactatggaacagctc
ttcatgaacgttgctgtctttgagaacgaggtttttgctggcgttagcacacaccaggag
ctcttccctcacagcctgctgagtgtgatcgccaacttcatccccttctctgatcacaac
cagagtccacggaacatgtaccagtgccagatgggtaaacagactatgggcttcccactt
ctcacttaccaagaccgatctgataataaactctatcgtcttcagactccacaaagtcct
ttagtaagaccatacatgtatgattattatgacatggataactatccagttgggacaaat
gccattgttgctgtgatttcttacactggctacgatatggaagatgctatgattgtgaac
aaggcttcttgggaacgaggctttgcccatggaagtgtctacaagactgaattcatagac
cttgctgaaagaattaaacaaggagatgacaccctggtgtttggggttaaacctggtgac
acacgggttgtgcagaagttagatgatgatggattgccgtttataggagctaaactgcag
catggagatccctattacagctacctaaacctcagcactggggaaagttttgtgacatac
tataagagtaaagaaaattgtatagtggataacatcaaagtgtgtagtaatgatactggg
agtggaaaattcaagtgcgtttgtatcacgatgagagtccctcgaaatccaactattgga
gataaatttgccagtcgtcatgggcagaagggcattttgagcagattgtggcctgctgag
gacatgccttttactgagagtgggatggtgccagatattctgttcaatcctcatggtttt
ccatctcgtatgacaattggtatgttaattgaaagtatggctgggaagtctgcagctttg
catggtctctgccacgatgctacacccttcatcttctctgaagagaactcagccttagag
tactttggtgagatgttaaaggcagctggctacaacttctatggcaccgagaggttgtac
agtggtatcagtggggtagaactggaagcagacattttcataggtgtggtttattatcag
cgcttacgccacatggtatcagacaaatttcaagttaggacaactggagccagggacaaa
gttaccaaccagcctcttgggggaagaaatgtccagggtggaatccgttttggggagatg
gaacgggatgctcttttggcccatggtacatcttttctccttcatgaccgcctcttcaac
tgctctgatcgctcagttgcccacgtgtgtgtgaagtgtggtagtttactctctccactg
ttggagaagccacccccttcttggtctgctatgcgcaacagaaaatacaactgtactctt
tgtaatcgcagtgacactgtcgatactgtctctgtgccttatgtttttcggtattttgta
gctgaactggcagcaatgaacatcaaagtgaaactggatgtcatttaa
DBGET
integrated database retrieval system
