Chryseobacterium capnotolerans: H5J24_03345
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Entry
H5J24_03345 CDS
T08205
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ccao
Chryseobacterium capnotolerans
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccao03009
]
H5J24_03345 (rimO)
Enzymes [BR:
ccao01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
H5J24_03345 (rimO)
Ribosome biogenesis [BR:
ccao03009
]
Prokaryotic type
ribosomal protein modification factors
H5J24_03345 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UHO39182
LinkDB
All DBs
Position
739237..740538
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AA seq
433 aa
AA seq
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MRTKSVGKKKINVVTLGCSKNVYDSEVLMSQLKANGKEVVHEDRGDIVVINTCGFIDNAK
EESINTILDYVEAKNRGEVEKVFVTGCLSERYKPDLVREIPDVDQYFGTRDLPILLKHLG
ADYKHELVGERLTTTPKHYAYLKISEGCDRPCSFCAIPLMRGGHVSTPIEKLVSEAQKLA
KKGTKELILIAQDLTYYGLDIYKKRALGDLLKELVKVEGVEWIRLHYAFPSGFPEDVLDI
IREEPKVCNYIDIPLQHINSDLLKSMKRGTTHEKTDALLGKFREKVPDMAIRTTLIVGYP
GETEERFQELKDWVREQKFDRLGCFTYSHEENTGAYVLEDDIPQEVKEARVEEIMELQSQ
ISWEKNQEKVGKVFRCIFDRKEGNYFIGRTEYDSPDVDNTVLVSAEDTYISIGEFADVKI
TSAEEFDLYGELI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaatcggtagggaagaaaaaaatcaatgtagttacacttggatgttccaag
aatgtatatgactctgaagtattaatgagccagctgaaagccaatggaaaggaagttgtt
catgaagaccgtggagatattgttgtgattaatacctgtggatttattgataatgctaaa
gaagaatctatcaataccatccttgattatgtagaagcaaagaacagaggagaagtagaa
aaagtattcgttacaggttgtctttctgaaagatataaaccggatttggttagagaaatt
ccagacgtagaccagtattttggtacaagggaccttccgatactattaaaacatcttggt
gcagattacaagcacgaattagtaggagagaggttaaccacaactccgaaacattatgca
taccttaaaatttcagaaggatgtgacagaccttgctcattttgtgctattcctttgatg
agaggtggccacgtttctactcctattgaaaaattagtctctgaagctcaaaaactggct
aaaaagggaactaaagaattaattcttattgctcaggatcttacttattatggacttgat
atttataaaaaacgtgcattaggagatttactgaaagagttagtaaaagtagaaggagtt
gaatggattcgccttcattatgctttcccaagcggtttcccggaagatgttttggatatt
atccgtgaggagccaaaagtttgtaattatatagatattcctcttcagcatatcaattct
gatctgttgaaatcaatgaaaagaggaactacccatgagaaaacggatgcgcttttaggg
aaattcagagaaaaagttccggatatggccatcagaacaactcttattgtgggatatccc
ggagaaactgaagagagattccaggagcttaaagactgggtgagagaacagaaatttgat
agattaggttgttttacctattctcatgaagaaaatacaggtgcctatgtgctggaagat
gatattccacaggaagtaaaagaagcaagggtagaagaaatcatggaattacaatctcag
atctcttgggaaaagaatcaggagaaagtaggaaaagtattcagatgtattttcgatcgt
aaagaaggaaactactttatcggtagaacagaatatgattcgcctgatgtagataacacc
gttttagtatctgctgaagatacttatatttccattggagaattcgctgatgtgaagatt
acttctgctgaagaatttgatttatatggtgaattaatatag
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