Cyprinus carpio (common carp): 109062452
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Entry
109062452 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 1-like
KO
K02599
Notch 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109062452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
Ank
Notch
EGF_2
NOD
NODP
Ank_4
Ank_3
Ank_5
EGF_3
DL-JAG_EGF-like
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
109062452
NCBI-ProteinID:
XP_018935086
LinkDB
All DBs
Position
Unknown
AA seq
2479 aa
AA seq
DB search
MTMKCKSYTECSIYSTYSTCACFPLYRCPESFAGTACQFHNPCFQSPCRNGGVCHLITSV
NKVDFVCNCSLGYTDRLCLTSTNNMCLSSPCRNGGTCELTSIHTYKCKCPPGWSGKNCHQ
ADPCASNPCANGGKCSPFDSDYICHCTPFFSGQTCKQDVNECAQSPSPCKNGGVCENEVG
TYRCSCPAEYTGRHCETLYQPCNPSPCYHGGTCVQKGETSYECSCLPGFSGQNCEENIDD
CPDHRCLNGGTCVDGVNTYNCQCKPEWTGQFCTEDVNECDLMPNSCQNGGTCLNTQGGYN
CVCVNGWTGDDCSENIDDCADAACHAGATCHDRVASFLCECPHGRTGLLCHLDDACISNP
CQKGSNCDTNPVNGKAICTCPLGYVGPSCDQDVDECSLGANPCEHAGKCINTKGSFQCKC
LRGYLGARCELDINECMSNPCHNDATCLDQIGGFHCICMPGYEGLFCQINTNECDSMPCL
NNGKCIDKINNYQCECPTGFSGSQCQFDIDECASTPCKNGAKCIDGPNMYTCQCAEGYTG
QHCETDVDECLSNPCHYGTCKDGLASFTCMCRAGFTGRLCEININECLVSRASSQPCQNG
ATCQDRENAYLCICPKGTAGANCEVNLDDCQSNPCDFGRCIDKINGYECACEPGYTGKMC
NINIDECAINPCHNGGTCVDGVNGFKCLCREGYHDTTCQSQLNECFSNPCIHGHCEDKVN
GYNCICDSGWSGVNCDINNNECDSNPCMNGGTCKDMTSGYVCTCRAGFSGPNCQTNINEC
ASNPCLNQGTCIDDVAGYKCNCLLPYTGENCETLLAPCSPKPCKNGGVCKESEDYESFSC
VCPEGWQGQTCEVDINECVKNPCRNDAICQNSIGSYKCSCKSGYTGRNCETDIDDCKPNP
CSNGGFCKDAVNVFTCTCLPGFRGSRCEEDINECDSNPCKNGANCTDCVNSYTCTCPPGF
SGIHCENNTPDCTESSCFNGGTCVDGINSFSCLCPTGFTGNYCQHDINECDSRPCMNGGT
CQDSYGTYKCTCPQGYHGLNCQELVNWCKPSPCKNEGICRQSGTRYSCQCQTGWTGLYCD
VPSVSCEVAAKQQGVEVARLCRNSGQCLDAGNTHYCHCQAGYTGSYCEEQVDECIPNPCQ
NGATCTDYLGGYSCECVPGYHGVNCSDEINECLSQPCQNGGTCIDLINTYKCSCPRGTQG
VHCEINIDDCTPFTDPITQEPKCFNKGRCVDRVGGYHCICLAGYVGERCEGDVNECLSNP
CDPRGTHSCIQLTNNYRCECRTGYTGQRCDKVFDGCKGKPCRNGGTCAVASNTPHGFICK
CPPSFTGSTCENDAHACGTLQCKNGGTCVSGHKSPKCLCTPAFTGPECQHPTEGHCTTNP
CYNGGTCEYISEAPYYHCICPTSFNGLFCHILDFSFSGGPARDITPAPEVTVRCEIAECE
NKKGNKICDSACNNYACDWDGGDCSLNFNDPWKNCSGALQCWRYFNNGKCDEQCHNAGCL
YDGFDCKKLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLDCASNVPEKLAAGLLV
VVVHILPDQLRNNSFGFLRELSRVLHTNVVFRRNSKGEEMVYPYYGNEQELRKHNIKRSL
DDWNDASSNVLSSVQSSIYNIVVEGGRKRRELDEMQIKGSVVYLEIDNRQCYQQTSECFQ
SANDVAAFLGALASSGNLNMPYVIEAVTSKIDGPSSVELYPVYVVLAGLALLAFVAVGMV
ASRKRRREHGQLWFPEGFKTSEPSKKKRREPVGEDSVGLRPLKNCSDISLMDDSQNEWGE
EEPSDTKRFRSEEQAMLDLDHKPDHRQWTQQHLDAADLRIPSIAPTPPQGEIENDCMDVN
ARGPDGFTPLMIASCSGGGLETGNSEEEEDASANVINDFIYQGANLHNQTDRTGETALHL
AARYARSDAAKRLLEASADANIQDNMGRTPLHAAVAADAQGVFQILIRNRATDLDARMHD
GTTPLILAARLAVEGMVEELINCHADVNAIDDSGKSALHWAAAVNNVDAAMVLLKNGANK
DMQNNKEETPLFLAAREGSYETAKVLLEHFANREITDHMDRLPRDIAQDRMHHDIVRLID
EYNLVRSPPMHSAPLCTTLSPPLCSPNGFMGSMKPSIQSKKPRKPSQKGIGCKDGKDMKV
KKKKAQDGKGNLLDSSAVLSPVDSLESPHGYISDVASPPLMTSPFQQSPSMSLNHLQGIS
DTHMGVNHLGMGNKQDLAHIQFDPLPPRLTHLPVAGSNGSNIMNGQCEWLGRMHNSMGPQ
NQFGAMRNASGQASLHQTSLMTSLHNGRPATLSQMMNYQSLQNTHLSTQPHIMQQMQQNM
QQRPQQTNIQLQHQSSNQPSGVSQNLLGGELVGPDNMPIHTIIPQETQLLNPSSLGTSMA
GTQFLTPPSQHSYSAPLDTNTPSHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGI
SSPPTSMQSQIGHIPEQFK
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atgactatgaagtgtaaatcatatactgagtgcagcatatacagtacttattccacctgt
gcttgctttccactctacaggtgtcccgagtcgtttgccggaacagcgtgccagttccac
aacccttgcttccagtctccatgcagaaatggcggcgtgtgccatttgattacttctgtt
aacaaggtggactttgtgtgcaactgcagcctgggctacacagaccgactgtgtctcact
tccaccaataacatgtgccttagctccccgtgccgaaacggaggcacgtgtgaactcacc
agcatccacacttacaagtgtaaatgcccaccaggctggtcaggtaagaactgccatcaa
gccgatccttgtgcctcaaatccttgtgccaatggcggtaagtgtagtccctttgattcc
gactacatctgccactgcacgcccttcttctcaggccaaacctgcaaacaagacgtgaac
gagtgtgcccagagtccctctccttgcaaaaacggtggcgtgtgtgagaacgaggtgggc
acgtatcgctgcagctgccctgcagagtacactgggagacattgcgagaccctctatcag
ccctgtaacccttcaccatgctaccacggaggcacttgcgtccagaagggagagacgagc
tatgagtgctcctgcttgccaggatttagtggtcagaactgtgaggagaacattgatgac
tgtccagaccatcgctgccttaatggagggacctgtgtggatggagtgaacacctacaat
tgccaatgcaagccagagtggacaggtcagttctgtaccgaagacgtcaatgagtgtgat
ttgatgcccaattcctgccagaatggtggtacatgcttgaacacacagggtggatacaac
tgtgtgtgtgtaaatggctggacaggggacgactgcagcgaaaacatcgatgactgcgca
gatgcagcctgccacgcaggagccacatgccatgatcgggtggcctccttcctctgtgaa
tgccctcatgggcgcacaggtctgctgtgtcacctggatgatgcttgtattagtaaccca
tgccagaaaggctccaactgtgacaccaatccagtcaatggcaaggccatctgtacctgt
cctctgggttatgttggcccatcctgtgaccaagacgttgacgaatgttccctgggtgca
aacccctgcgaacatgctggaaagtgtataaacacaaaaggttccttccagtgtaaatgt
ctgcggggatatttgggagctcgatgtgaactggacattaacgaatgcatgtccaaccca
tgccataatgacgctacctgtttggatcaaatcggaggcttccattgcatctgtatgcca
gggtacgagggactcttctgtcagatcaatactaatgagtgcgacagcatgccttgcctc
aacaatgggaagtgcatcgacaagatcaacaactaccaatgcgagtgccctacaggattc
tcggggagtcagtgccagttcgacatcgatgagtgcgctagcaccccctgtaaaaatggg
gccaagtgtatcgatgggcccaacatgtacacctgccagtgtgctgaaggatacacaggg
cagcattgtgaaacagatgtagatgagtgtctatccaacccgtgtcactacggcacttgt
aaagacggcctggcgtccttcacctgtatgtgccgtgctggttttacaggccgtctgtgt
gagatcaacattaatgagtgtctcgtcagccgtgccagcagtcagccgtgccagaatgga
gccacctgccaggaccgtgagaatgcctacttatgcatctgccctaaaggaaccgcaggt
gctaactgtgaggttaacctagacgactgtcaaagcaatccctgcgattttggaagatgc
attgacaagataaatggttacgagtgtgcctgtgagccgggatatacagggaaaatgtgt
aacatcaacattgatgaatgtgccatcaacccatgtcacaatggtggaacctgcgttgat
ggagtcaatggctttaaatgtctgtgcagagaggggtatcatgacacaacctgccaatca
cagctcaacgaatgctttagcaacccctgcattcatggacactgcgaagacaaagtcaat
ggatataactgtatttgtgactctggctggagtggtgtcaactgtgacatcaataacaat
gagtgtgattccaacccctgtatgaatggaggcacctgtaaggacatgaccagcggctac
gtctgcacatgccgtgctggcttcagcggtcccaactgccaaacaaatatcaacgaatgc
gcctccaacccttgcttgaatcaaggaacctgtatcgatgacgtggccggatacaaatgc
aactgtttgctgccttacactggtgagaactgtgaaaccctgttggccccatgtagccct
aaaccctgtaagaatggaggcgtgtgtaaggagtccgaagactatgagagcttctcttgt
gtgtgtcctgaaggatggcaaggccaaacatgtgaggtggatatcaacgaatgtgtcaaa
aacccttgtcgaaatgacgccatctgtcaaaactctattggcagctacaaatgcagttgt
aaatcaggctacacaggccgcaactgtgaaacagacattgacgattgcaagcccaaccct
tgcagtaacgggggcttctgcaaagacgctgtgaacgtcttcacttgcacctgcctacca
ggtttccgaggaagcagatgtgaggaggacattaatgaatgtgacagtaacccatgtaaa
aacggcgccaactgcacggattgtgtgaacagttacacctgtacctgtccacctggattc
agtgggattcactgtgagaacaacacacctgactgtactgagagctcttgttttaatggc
ggcacatgtgtggatggcatcaacagcttctcgtgcctgtgcccaacggggttcactgga
aactactgccagcatgacatcaacgagtgcgactccagaccctgcatgaatggaggcacc
tgtcaggacagctacggcacatacaagtgcacctgccctcagggataccatggccttaac
tgccaggagctggtgaactggtgtaagccgtctccctgtaagaatgaaggtatctgcaga
cagagcggcactaggtacagctgccagtgtcagacaggctggactggtttatactgcgat
gtccccagcgtttcttgcgaggtggccgccaaacagcaaggtgtagaggtggcccggctg
tgtcgtaactctggccagtgtctggatgctggaaacacacactattgtcactgtcaggcc
ggatacacgggcagctactgtgaggagcaggtggatgaatgcattcccaatccttgccag
aacggagcaacctgcactgactacttgggtggctattcctgtgaatgcgtgccaggttat
catggagtgaactgctctgatgagatcaatgagtgtctgtctcagccctgccagaacgga
ggcacatgcatcgacctgatcaatacctacaaatgctcctgtcctcggggaacacaaggt
gtgcactgcgagatcaacattgacgactgcacacccttcactgaccccatcacccaggag
cccaaatgctttaacaagggccgctgtgtggaccgtgtgggtggataccactgcatctgc
ttggccggatatgtgggggaacgctgtgagggtgatgtcaatgaatgcttgtccaaccct
tgtgacccccgtggcacacacagctgcatccagctcacaaacaactaccgctgcgagtgt
cgcacaggatacacaggtcagcgctgtgacaaagtgtttgatggctgtaaggggaaacct
tgccgtaatggaggcacctgtgctgtggctagtaacactcctcatggcttcatctgcaaa
tgtccaccgagttttacaggctcaacctgcgagaatgacgctcatgcctgtgggactctc
cagtgtaaaaatggtggtacatgcgtttctggtcacaagagccccaaatgcctgtgcacc
cctgccttcactggtcctgagtgccagcatcccactgagggtcactgcaccaccaatcca
tgctacaacggaggcacgtgcgagtatatctcagaggccccatactaccactgtatctgt
cctaccagcttcaatggcctcttctgccacatcctggacttcagcttctcaggtggccct
gctcgagatatcacacctgctccagaagtgacagtgagatgcgagatagcagagtgtgag
aataagaaaggcaataagatctgtgacagcgcatgtaataattacgcctgcgactgggat
ggaggggactgctcgctgaacttcaatgacccgtggaagaactgttcgggtgcgctgcag
tgctggcgctattttaataacgggaagtgtgatgaacagtgtcacaatgctggatgcctc
tacgatggatttgactgcaagaaactggagggccagtgcaatccactctatgaccagtat
tgcaaagaccactatgcagatggccactgtgaccagggctgcaataacgcagagtgtgaa
tgggacgggctggactgtgccagcaacgtacccgagaagttagctgctggactcctagtt
gtggtggtccacatattacccgaccagctccgaaacaactcctttggatttctgcgtgag
ctcagccgagtcctccacaccaacgttgttttccggcgcaacagcaagggagaggaaatg
gtctacccttattacggcaacgagcaggagctgagaaagcacaacatcaaacgatcacta
gatgactggaacgatgcttccagcaatgtcttgagctccgtacaaagcagcatttacaat
atagtggtggaaggagggagaaaacgcagagaactggacgagatgcagatcaaaggctcc
gtggtatatctggagattgacaaccgccaatgctaccaacaaacctccgagtgcttccag
agcgcaaacgacgtggcggctttcctcggagccctggcttccagcggcaatctgaatatg
ccttacgtcatcgaggccgtcacaagtaagattgatggaccgtcgtctgtagagctctat
ccagtctacgtggttctggcaggactggcgctgctggcctttgtcgccgtgggaatggtc
gcgtcccgtaaacgccgccgggaacatggtcagctctggtttccggaaggtttcaagacc
agcgagcccagcaagaagaagaggagggagccggttggtgaagactctgtcggtctgagg
ccacttaagaactgttcagatatttcattaatggatgacagccagaatgaatggggagaa
gaggaaccgtcagacaccaaacgcttcaggtctgaggagcaggcgatgctggatttagac
cataagccagatcaccggcagtggacgcagcagcacttggatgcagccgatctacgcatc
ccatccatcgctcccacaccccctcagggcgagatagagaatgactgcatggatgtcaat
gcccgaggaccagatggctttacacctctcatgatcgcatcttgtagtggaggagggcta
gaaacaggaaacagcgaggaagaggaagatgcctcggccaacgtcatcaatgatttcatc
taccaaggtgccaaccttcacaaccagacagaccgtacgggtgagacagccctacatctg
gctgcccgttatgcccgctcagatgctgcaaaaaggctcctggaggccagtgcagatgcc
aacatccaggacaatatgggacggactccattacatgctgctgtggctgcagatgcacaa
ggggttttccagattttgatacgtaaccgtgccacagacctggatgcccgcatgcatgat
ggcactacacctctgatactggcagcaagacttgcggtcgagggcatggtggaggaactc
atcaactgccatgctgatgtcaatgccattgatgattctggtaaatctgcacttcactgg
gcagccgctgttaacaacgtagatgcagcgatggtattgcttaagaacggggcaaataaa
gatatgcaaaacaataaggaggagactcctctattcttggcggcaagagaaggaagttac
gagactgctaaagttcttctcgagcatttcgctaatcgagagatcacggaccacatggat
cgactcccacgggatatcgctcaggacagaatgcatcatgacattgtgcgactcatcgac
gaatacaacctggtccgcagccctcccatgcacagcgcccctctctgcaccaccctctcc
ccgcctctctgctcacccaatggcttcatgggtagtatgaagccctccatacaaagtaaa
aaaccccgcaagccaagccagaaaggcatcggttgcaaagatggcaaagatatgaaagtc
aagaagaagaaggcacaggatggaaagggaaacttactagacagctcagctgtgctctcc
ccggtcgattccttggagtcgccccacgggtacatatctgacgtcgcctccccacccttg
atgacgtcaccctttcagcaatcaccctccatgtcgcttaatcacttacagggtatctca
gacacccacatgggcgtcaaccatctgggaatgggcaacaagcaagacctggcccatatt
cagtttgatccattacccccacgtctcacccatcttccagtggccggatctaatggctca
aacatcatgaacggccaatgcgaatggctcgggcggatgcacaatagcatgggtccgcaa
aatcaattcggagccatgaggaacgcctcaggtcaggccagccttcaccaaaccagcctg
atgacgtctcttcacaatggccgtcccgccacgctgtctcagatgatgaactatcaaagc
ctgcagaacacacacctcagcacacagccacatataatgcagcagatgcagcagaacatg
caacagagacctcagcagacaaacatccagctgcagcaccagagctccaatcaacccagc
ggcgtgagccagaacttactcggcggtgagttggttggaccggacaacatgcccatccac
accatcatcccccaggagacccagctgttgaacccgtcttctctgggtaccagtatggcg
ggaacgcagttcctgacgccaccttcccagcatagttactcagccccattggacaccaac
acccccagccaccagctccaagtgcctgaccaccctttcctcacgccgtctccgggttca
ccggaccagtggtccagctcgtcgccccattccaacatgtctgactggtcggagggcatt
tctagtcctcccactagcatgcagtctcaaatcggacacataccggagcagttcaaataa
DBGET
integrated database retrieval system
