Cyprinus carpio (common carp): 109089958
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Entry
109089958 CDS
T05134
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04020
Calcium signaling pathway
ccar04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109089958
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109089958
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109089958
Ion channels [BR:
ccar04040
]
Ligand-gated channels
Glutamate (ionotropic)
109089958
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
SIP
Peripla_BP_6
DUF3663
DUF6724
Motif
Other DBs
NCBI-GeneID:
109089958
NCBI-ProteinID:
XP_018959378
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All DBs
Position
10:12154843..12176337
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AA seq
1063 aa
AA seq
DB search
MRLVLFAFLISCSCARGGCEPKTVNIGAVLSQKRYEQVFKDAVTQANNIYGKEKFKMNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFQWNHIILIVSDDHEGRAAQKRLETL
LEERETKSKNRNYENLDQLSFDNKRGPKAEKVLLFSQDTNLTALLQEAKELEARVIILSA
SEDEATAIYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHIYD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGLTGRVEFNDD
GDRRFAHYSILNYQKTRLVQVGIYNGSQVVMNTQRKIIWPGGETEKPKGYQMSTRLKIVT
IHQEPFVYVKPTLRDGTCKEEYTVNGVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLTGTASRSKTLCTYSHPVYMPVS
SFLVESCGVRESTVLTHSQDGDGVWTGDTMLIVISAKISRDRKSGRAEPDPKKKASFRSI
STNLASNIKRRRSSKDTVRRLRKRRPACTSIFSLSSSFSSSSACPVSFTLFLSPVISSLL
SKTNVSSQTLFTLTHGVTVMATCLSVSHLYSIQTSVREIQSGI
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggttctgttcgccttcctcatctcgtgctcctgcgcgagaggcggatgcgaa
cccaagactgtgaatatcggggctgtactgagccagaagagatacgaacaagtgttcaaa
gacgctgtcacccaagccaacaacatatacggcaaagagaagttcaagatgaatgctatt
tcagtcacccataagccaaacgccatccagatggcactctccgtatgtgaggatctcatc
tctaaccaggtgtatgcgatcttggtgagccacccaccccagtccaatgaccatctgact
cccactccagtgtcctacacagctggtttttaccgtatccctgtagtgggcctcaccacc
cgcatgtccatctactccgataagagcatccacctctccttcctgcgcacggtgccaccc
tattcccaccaagcccaagtgtggtttgacatgatgcgtgagttccagtggaatcacatc
atcctgattgtgagtgatgaccacgagggcagagcggcacaaaaaagactagaaaccctg
ctggaggagagggagacgaagagtaaaaacaggaactatgaaaacctcgaccaactgtcc
tttgacaacaagcgaggacccaaggcagagaaagtgctcctgttcagccaagacacaaat
ctgactgctctgctccaggaagccaaagagctagaggcccgagttatcatcctctctgca
agtgaagacgaagccacagccatttacaaagcggcacgccagctcaatatgacaggctct
ggttatgtgtggctggttggagaaagggagatgtctggtaaagcactgagtgaagcccca
gacggcttgctcggccttcagcttatcaatggcaagaacgagtctgcgcacatctacgat
gccgtggctgtggtggcccagtccattcaggagctctttgagaaggagaatatcacagag
cctcctcgaggctgtgttggcaatacaaacatctggaagactggcccactcttcaaacga
gtgctgatgtcatccaagtatccagatggcctgacaggccgcgtggagtttaatgatgac
ggagacaggaggttcgcccactacagcattctgaactaccagaaaacccggctggtgcaa
gtgggcatctacaatggctcgcaagttgtaatgaatactcagaggaagattatttggcca
ggaggagagactgaaaagccaaaagggtatcagatgtcaacaagattaaagattgtcacc
attcatcaagagccctttgtctatgtgaaaccaacgctacgagatggaacatgcaaggaa
gagtacactgttaatggagtcctgatcaaaaaagtgatctgcactggccccaatgagacc
attccaggtcgccccatagtgcctcagtgctgctatgggttctgcattgaccttttgatc
aaacttgcaatgacaatgaacttcacctatgaagtgcatctagtggctgatggcaaattt
ggcactcaggagcgtgtaaataacagcaacaagaaggagtggaatggcatgatgggagag
ctcctgagtggcttggcagacatgatcgtggctccacttacaatcaacaatgaacgagcc
cagtatatagagttctcgaaaccattcaagtaccaggggctcacaatacttgtcaaaaag
gaaataccacgcagtacactggactcgttcatgcagccttttcagagcactctgtggtta
ctggtgggtctatcggtccatgttgtggcggtgatgctctacctattagaccgtttcagc
ccgtttggaaggtttaaagtaaatagtgaagaggaagaagaagatgccctcaccttatcc
tctgctatgtggttctcctggggtgtacttctgaactccggcattggagaaggtgcccct
cggagcttttcagcaaggattttaggtatggtgtgggctggttttgctatgattatagtt
gcatcttatactgccaatttggcagccttcctagtgctggatcggcctgaggagcgcatt
accggcatcaacgaccctaggctgcgaaacccatcagacaagttcatctacgccacagtg
aagcagagttctgtggacatttacttccggcgccaagttgagctaagcaccatgtaccgc
cacatggaaaagcacaactacgagagcgccgctgaagccatccaggccgtgcgagacaac
aaactccacgcgtttatatgggattcagcagtgttggagtttgaggcctcgcagaaatgt
gacctggtcaccacaggcgagctgttcttccgctctggatttggtatcgggatgcgtaaa
gatagcccgtggaagcaaaatgtttcactggccatcctcagttcccatgagaatggcttc
atggaggacttggataaaacctgggtccgttatcaggagtgtgactccagaagcaatgca
ccagccacgctcactttcgagaatatggcaggcgtgtttatgttggtggctggtggcatc
gtcgccgggatcttcctcatcttcattgagattgcgtataaacgacacaaggatgcacgc
aggaagcaaatgcagctggcttttgcagcagttaatgtatggaggaagaacttaacaggt
acagctagtcgaagtaagactttatgtacatattctcacccagtctatatgccagtgtcc
tctttccttgtagagagctgtggggtgcgtgaaagcactgttctgactcacagccaagat
ggagatggagtgtggacaggagacaccatgttaattgtgataagcgctaaaattagcagg
gataggaaaagtggtagagcagagcccgaccccaaaaagaaagcctcttttaggtccatc
agtaccaacctggcctccaacatcaagagacgtaggtcgtccaaagacacggtaagaaga
ttaagaaaacgacgccctgcctgtacttctatcttctcactctcttcctctttctcttcc
tcctcggcctgccctgtttcttttactctcttcctttctcctgtcatctcatctctcctc
tccaaaacaaacgtctcatctcagactctcttcaccctcacacatggagttacagtcatg
gccacatgtctgtcagtcagccatctatactccatccagacatctgttagggaaatccaa
tcaggaatctag
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