Cyprinus carpio (common carp): 109090593
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Entry
109090593 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1,4-galactosyltransferase 1-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar00052
Galactose metabolism
ccar00510
N-Glycan biosynthesis
ccar00513
Various types of N-glycan biosynthesis
ccar00514
Other types of O-glycan biosynthesis
ccar00515
Mannose type O-glycan biosynthesis
ccar00533
Glycosaminoglycan biosynthesis - keratan sulfate
ccar00601
Glycosphingolipid biosynthesis - lacto and neolacto series
ccar01100
Metabolic pathways
Module
ccar_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
ccar_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
109090593
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
109090593
00513 Various types of N-glycan biosynthesis
109090593
00515 Mannose type O-glycan biosynthesis
109090593
00514 Other types of O-glycan biosynthesis
109090593
00533 Glycosaminoglycan biosynthesis - keratan sulfate
109090593
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
109090593
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccar01003
]
109090593
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109090593
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109090593
Enzymes [BR:
ccar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
109090593
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
109090593
2.4.1.90 N-acetyllactosamine synthase
109090593
Glycosyltransferases [BR:
ccar01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
109090593
Membrane trafficking [BR:
ccar04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
109090593
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of breast milk
109090593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
109090593
NCBI-ProteinID:
XP_018959973
LinkDB
All DBs
Position
2:complement(8869172..8878983)
Genome browser
AA seq
312 aa
AA seq
DB search
MVGSPSRGWRLYDNATEAEVNKVIYSNGSVIKDDVEEEHAVLQSCPETSPLLVGPMRVEF
SELVNLDMVRKENPQLVMGGRYKPYDCVALQKVAIIIPFRNRGEHLKYWLHYLHPVLQRQ
QLDYGIYVIQQDGEGTFNRAKLLNVGYVEALKEYDYDCFIFSDVDIIPMDDRNTYMCSSQ
PRHLSVSMDKFGFRLPYKQYFGGVSAISKEQFQKINGFPNNYWGWGGEDDDIFNRLVFQG
MKISRPSGDIGKCRMIRHSRDQKNEPNPQRFKRIAHTRQTMKTDGIKSLSYKVVDIEKDL
LYTQITVDIGKP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggttggatccccatctagggggtggagattgtatgacaatgcaacagaggcagaagta
aataaagtcatatattctaatggaagtgtcattaaagatgacgtagaagaggaacacgca
gtactacaatcttgtcctgagacgtcaccacttttagtgggtccaatgcgagttgaattt
tctgagcttgtaaatttggatatggtgcgtaaagagaatccacagctggtgatgggcggc
aggtataaaccctatgattgtgtggctctacaaaaagtggcaataatcatcccattcaga
aacagaggtgaacacctgaagtactggctccactaccttcaccccgtcctacagaggcaa
cagctcgattatgggatttatgtcatacaacaggatggagaggggacattcaacagggcg
aaactgctcaatgtgggttacgtagaggcactaaaggagtatgattatgactgtttcatc
ttcagtgatgtagacatcatccccatggacgaccgcaacacctacatgtgctccagccag
cctcgccacctctctgtgtccatggacaagtttggttttaggttgccatataaacagtat
tttgggggtgtatcagcaattagtaaagagcagtttcaaaagatcaatggctttcccaat
aactactggggctggggaggagaagacgatgacatctttaacaggctggtatttcaaggc
atgaaaatatcaaggccgagcggagacatcggtaaatgccgaatgattcgtcactcaaga
gaccagaaaaatgagccaaacccacagagatttaagagaattgctcacacacgacagaca
atgaagacggatggcatcaaatcgctcagttacaaagtggtagatatagagaaagacctg
ctttacacccaaatcacagtggacatcggcaagccatga
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